Plant Circular RNA Database

Detail information of Os04g0340300_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os04g0340300_circ_g.1
					
						ID in PlantcircBase
						osa_circ_023451
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr4: 16061603-16066211  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os04g0340300						
					
						Parent gene annotation
						
							Terpenoid synthase domain containing protein. (Os04t0340300-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os04g0340300_circ_igg.1 Os04g0340550_circ_g.1 Os04g0340300_circ_g.2 Os04g0340300_circ_igg.3 Os04g0340300_circ_g.4 Os04g0340300_circ_g.5 Os04g0340300_circ_igg.6 Os04g0340300_circ_igg.7 Os04g0340300_circ_ag.1 Os04g0340300_circ_igg.2 Os04g0340300_circ_igg.3 Os04g0340800_circ_g.1 Os04g0341500_circ_igg.1 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os04t0340300-01:3

General Information
CircRNA Name	Os04g0340300_circ_g.1
ID in PlantcircBase	osa_circ_023451
Alias	NA
Organism	Oryza sativa
Position	chr4: 16061603-16066211 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os04g0340300
Parent gene annotation	Terpenoid synthase domain containing protein. (Os04t0340300-01)
Parent gene strand	-
Alternative splicing	Os04g0340300_circ_igg.1 Os04g0340550_circ_g.1 Os04g0340300_circ_g.2 Os04g0340300_circ_igg.3 Os04g0340300_circ_g.4 Os04g0340300_circ_g.5 Os04g0340300_circ_igg.6 Os04g0340300_circ_igg.7 Os04g0340300_circ_ag.1 Os04g0340300_circ_igg.2 Os04g0340300_circ_igg.3 Os04g0340800_circ_g.1 Os04g0341500_circ_igg.1
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os04t0340300-01:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGGAGGTGAGCTGCATTGTACAAACTTAATAATGCCCTTGGTTCATCAGCTATTGTATTGATGA
ACCTCCCATCCTCTCCTTTGAATTTTTCGAATACATctcttttttcatgcaggtcacccggtat
ttgtcactggcctctacttgagcttcagtctccctgaagtaattcagcagtgcacggtagaact
ttttcatg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 734
Transcript exons: 16061603-16061738,16064346-16064564,16065833-16066211
CTCTTTTTTCATGCAGGTCACCCGGTATTTGTCACTGGCCTCTACTTGAGCTTCAGTCTCCCTG
AAGTAATTCAGCAGTGCACGGTAGAACTTTTTCATGTACTCTGGTAGTAATGAGATAGCACTTT
CATCCCATCTTTGTATGGCTTCATTCAGCTTCCTGCATTCCTCGATGGTGGCATGATCATCATA
TGTGTCATCCATAAGGACAATGAATACAATTATCTTGGCAAGGATCATCCGTGTGAGTGTTAAG
TTTTCTTCATAGAACAGCGCATAGGACCAAAGATATGACTCCACTGCACGATCTCTAACATGAC
TTAGCTCGACATATCCATAAAGATCTTTCCACCACTGAGAAAAAGCTTTGAGCTCCTTCAAGTG
GACATGCTGCAGAAGGTTAAATTCCAGCTTTGCAAGATCTAAAAGAACAACAATACATTCTTCC
TCCTGTCCGTACTCCAGCATGTAATGCAACATTTCAACTCTCTTGTAGGTTCTCGGTAATGGTA
AGTGTAGGGCACGGTTGATTTGATTATCTAGAGGGGCCTTGAGCCTACTTCCGTCCCTCATTGA
TTCGAGGTGGTGCCTTGCAAAAGACATAGCTTCTTCAAGTTCTGGCTCATCATGGACAAGGAGG
TGAGCTGCATTGTACAAACTTAATAATGCCCTTGGTTCATCAGCTATTGTATTGATGAACCTCC
CATCCTCTCCTTTGAATTTTTCGAATACAT
						
					

						Genomic sequence
						
							CTCTTTTTTCATGCAGGTCACCCGGTATTTGTCACTGGCCTCTACTTGAGCTTCAGTCTCCCTG
AAGTAATTCAGCAGTGCACGGTAGAACTTTTTCATGTACTCTGGTAGTAATGAGATAGCACTTT
CATCCCATCTGTCCAATAGGCCAATTGGGAATTTTTATGAAATTACTTAATTAGGCAAGTGTAA
ATAAATCTAGCCGAAAAAGATAGTTTGACAGGGATGTATCGCGTTGAAACCACAAATAAATGAA
TGAAATACTTTGTAAATTATGCTCAAATGGACACGCCATGTACCAGTGACGAATAAAGTGGTTT
GATGATGTTTAATATTTCTCGAATGAAAGACTTGTTAACATTGTGTGAAACGCGTGACCATAAT
TAATTGAGATGTATAGTGATCGATAAATTCGATGGTAACTGTACAACAAATTTATTTAGTTAGA
GGATCAACATGGTTTTTCAGTTGTGCTTTACTCAGATTAATTGTTTAGGTGCATTAAACATCAA
AAGGTAAAATAAACAATTTCTTTTTTATTTGCTCTAAGTAGCTCGGGTTCATGGAAATTGTTGG
TTCATATCATGCTGGCAGCAACAGCTCGGTAACAAGAATACTGATGCCAGCTACCTTTGGTAGT
TGTAGCTAGCTCTACCTCCAGTTGCACATCTCTGTTTTAATTAACTAAAAGTTGGCCTTAGCTG
TTTCTTGATAGAATGACAGTAGAATATATGTGTATGCATGAGCGGTACTCTGCTTGGTCATTGC
ATAGTAGTTGGAAAAACTCGCATGTTTTGCTGCTCTAGAATTAGAGGTGGAATGTTGAATGCTC
GGAAAACTACTTTTATAGGCGGTTACAATATAATTGGTACCCCCATTTTTGGAAGTGTTTAGCC
AACCAAATGTTACATAGGGCCTATAGAAATCGACAGTTTTGTGCTAGTGGATTGCACAACTGCA
TGTTAACAAATCTATTTTTTTGTATTTTAAGTTCGACTTTCAAGTCTTTAATTATTGTAGGCGC
AAAAAGTATTTCATATTTTAATTATCACAAGTTCGCAATTTTTTCACACAAAATATGCATCTAG
TATGTAGGATTCAAATCCGGGATCTCTCCCTTCATGTGTATCTTACTTATTACCATCTTACATA
TGAAGCACTTTGTTAATTACTATGAAATAGACGTTGGTCTTCTAATTTAAACTCTCCTAAACTT
GTAACACATATTAAAACCTTAAAGATTTATGTAGTGTTCATTTGAAGTGCGATTGAGGTGAACT
AAAGTTATATATGATCCCAACAATTTTTTCATTAAATTTGTAAGGTCCATATTTTGGTAATATC
CTTGTTCACTTATGTCAAGTTCCCATTGTATGTTTTGATGTGTTATGCAACTTGACATTTGTGA
ATGTTCATAATAAAGGAAATATCAAAAAAAAAATTGACTAGGCCATATTTGAGGAAATATTGTA
AGGATCTCATAGAACTTTGGATTAACTCAATTGGACTTAAGGTGTATTTTCTATGAATTTTAAA
ACTTTAGACTTCATAAAGATCTGTTTGTAAAATCATCCTATTTTAAAAAGTAGATTCCGAATTT
GTAACGAATATTTCGGCACCTAAATGTTCTTAAATGAAATAACTTTGACTAGAAAGTTACAAAC
CTTGTCGAGCGCTATATTGTTTTATAGAAATTGTACCCGTCAACGTATGTAACAAAAAATTCTA
ATGTAGACCTTAAAGCTTCTTATAATGAACTTTTGATCCCATTAACTACCTAAAATAGAAAAAC
ATTAACTACAACATCTCAACAAGAACTATAATTGTCACATAACATTTGTCATTAGGCGACATCA
TAGGAAAGAGTTACAAGTGGTTTCCTAATAGAACTGCCCTTAAAAATCAATTTTATTGATTTTT
TCTTATGAGATCCGTATATAAAAATGACCCCACCTTTCAAATTACGCGACCCATTTGTGTTAAT
AGACCTATTTTCACATGCAATTTTTCATAAGGAGCTATCTGTAAAAATAGTTTTCTTTTGTTAT
ATGACCCTGGGCGGCATTAGTCATCTTCATAGGGACACGGAAATGGTTTGTAGTGGTTACGATG
AAAAATGTGCATGTGCCTATTATTGAAATAAAAAGACTGCCAGCTTTTGGCCATCTAGACAATG
CGTCAGAGACAACCATCCCAATCTATCCCCTCCCCATCCCATCTAGAAGTAAAAGTATAGGTAG
GGTCTTCCAAAAATACACAAAATATTGAATCTGCATGGGAGGGGCAGAGGGTAGCTAATGAAGG
GGTGGGAGAGGTGCAGAGGATCGATGGGCACGCGTGTGACACATTGCTTAGTTAAACAACATGC
TACGTGTTAGGCAATAGCACGTTCTCTCTCTCTCTCTCTTTCTATCTATCTCTGTATATTTTTC
CATAGAAATTACTTTAAGTATATGAGGTTATATCACACGGTCATGCATAGCGTTTAGAAGTTTC
AATTGATTCAGATTTACAGGTATAGGGGTAGAATAGTTAAATTTTGATTTATTTTTGGGCTTCT
GATTTGATCATCTGTACCTTTCAATTTTGAAAAGCCTGATCTTTAACATATTATAATATTCTGT
GAAACTTTAGAACTTTTAAATATAATTTGTTGTGCGGTTTTCTTGATTTCTCTTACAATTGGTG
GCTCGAGATGAAGGATATTAATTTCTGTTGTTTTTGACCTATTAATTAATCGTACCTTTGTATG
GCTTCATTCAGCTTCCTGCATTCCTCGATGGTGGCATGATCATCATATGTGTCATCCATAAGGA
CAATGAATACAATTATCTTGGCAAGGATCATCCGTGTGAGTGTTAAGTTTTCTTCATAGAACAG
CGCATAGGACCAAAGATATGACTCCACTGCACGATCTCTAACATGACTTAGCTCGACATATCCA
TAAAGATCTTTCCACCACCTGAAAATTAAAATGATCGATTGTTTTAGGTGCTTGTTTTGAAGTA
TATTTAAGATATATATATTAGATCATTAGAAGCAATGAGTATTAATTGATTTATGATAGTAATA
ATATGTACATAGCATATCAGGCATACCGAAAACACTAACAACATGAAGAGCCATATTGCTAGTT
ATTTCAGTATATGTCACTAGTTATTGGATGTTTAAAGCCGCATAAAAGCCTCTAGTGTATTGCT
GCTGCAAATGCTGAGACAAAGATTGATAAAATATTCGGATATTCCTTGAAGGCTAGCTGTCCTT
CTTTTTTATCTGAGAGTGGACAAATTATATAGTAGTATAAACCTTAATTTTCTATTGTTCAATA
CTTGAAACTACAGATAAAGCGATACCTAAACTCGGATACACTAACTACCTCATTAACATGACAT
ATATTGACTACTTCTGGACAAAACATAAAGTTGTACATGTATTTTGTGATTAATTAACATTAAA
TTGGTTGCACAAACAAAGCGTCAATTTGTCTAAAACGAGGTACACATTTTATGTATTTACCATT
CAGTACATCGAAGGAACACAACGTCTCTCCAGAATTTTGCACTTATCTATATCTGTCTATCCTA
TATAGTCAGAGCTAAAATATCCACATGTATTGATTAAGTTCATCTGAAATACAACAGCCTTTGG
ATTCCTCCTTTACTTTGATCATAGCTACCCACATGTCATGTGTATTCAGAATTAACCACTTAGT
ATAATTGCTTTAGAGCTCAAGATGTATTGAGCAACATCTCACCTAGAAAGTAAAAGCCATCGAA
TCCCTCTCATACTTGTCATAACTATTCATGAGTTGAAATTACACATCAACTTCTACGTAGCTCA
AATTATAGTCCTTTTAGGTATGACGAGTAAATAATTTCCAATAGGTTTTTATCAAGCTTTCCTA
GAAAACAAATACTTCTAAATTCTCCACTGTAATGCACGGCCCATTCACTAATAACTAAATGTTC
TCTAAATTATCTTTACTAACTGTAGAGCGAAGATCGAAAAACATATTTTGGTAGTTGTATCGTG
CACATACACAGATTTGAGATTATTACAGTGGTTTGTTTCTGTCCTAAAGGGCACAATCAATTAC
TTTCATGGTATATATTTACTTATTATATATATAAATATCAAATAAATACTCTTTTTTTAGATAA
AGGAAATGAATAAACCTGGTATCTACATCCACAAGACATGTACAAAGACAAAGCAAAGAAAGAC
TCTTACTGAGAAAAAGCTTTGAGCTCCTTCAAGTGGACATGCTGCAGAAGGTTAAATTCCAGCT
TTGCAAGATCTAAAAGAACAACAATACATTCTTCCTCCTGTCCGTACTCCAGCATGTAATGCAA
CATTTCAACTCTCTTGTAGGTTCTCGGTAATGGTAAGTGTAGGGCACGGTTGATTTGATTATCT
AGAGGGGCCTTGAGCCTACTTCCGTCCCTCATTGATTCGAGGTGGTGCCTTGCAAAAGACATAG
CTTCTTCAAGTTCTGGCTCATCATGGACAAGGAGGTGAGCTGCATTGTACAAACTTAATAATGC
CCTTGGTTCATCAGCTATTGTATTGATGAACCTCCCATCCTCTCCTTTGAATTTTTCGAATACA
T
						
					

			
		

Sequences
Splice junction sequence	AGGAGGTGAGCTGCATTGTACAAACTTAATAATGCCCTTGGTTCATCAGCTATTGTATTGATGA ACCTCCCATCCTCTCCTTTGAATTTTTCGAATACATctcttttttcatgcaggtcacccggtat ttgtcactggcctctacttgagcttcagtctccctgaagtaattcagcagtgcacggtagaact ttttcatg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 734 Transcript exons: 16061603-16061738,16064346-16064564,16065833-16066211 CTCTTTTTTCATGCAGGTCACCCGGTATTTGTCACTGGCCTCTACTTGAGCTTCAGTCTCCCTG AAGTAATTCAGCAGTGCACGGTAGAACTTTTTCATGTACTCTGGTAGTAATGAGATAGCACTTT CATCCCATCTTTGTATGGCTTCATTCAGCTTCCTGCATTCCTCGATGGTGGCATGATCATCATA TGTGTCATCCATAAGGACAATGAATACAATTATCTTGGCAAGGATCATCCGTGTGAGTGTTAAG TTTTCTTCATAGAACAGCGCATAGGACCAAAGATATGACTCCACTGCACGATCTCTAACATGAC TTAGCTCGACATATCCATAAAGATCTTTCCACCACTGAGAAAAAGCTTTGAGCTCCTTCAAGTG GACATGCTGCAGAAGGTTAAATTCCAGCTTTGCAAGATCTAAAAGAACAACAATACATTCTTCC TCCTGTCCGTACTCCAGCATGTAATGCAACATTTCAACTCTCTTGTAGGTTCTCGGTAATGGTA AGTGTAGGGCACGGTTGATTTGATTATCTAGAGGGGCCTTGAGCCTACTTCCGTCCCTCATTGA TTCGAGGTGGTGCCTTGCAAAAGACATAGCTTCTTCAAGTTCTGGCTCATCATGGACAAGGAGG TGAGCTGCATTGTACAAACTTAATAATGCCCTTGGTTCATCAGCTATTGTATTGATGAACCTCC CATCCTCTCCTTTGAATTTTTCGAATACAT
Genomic sequence	CTCTTTTTTCATGCAGGTCACCCGGTATTTGTCACTGGCCTCTACTTGAGCTTCAGTCTCCCTG AAGTAATTCAGCAGTGCACGGTAGAACTTTTTCATGTACTCTGGTAGTAATGAGATAGCACTTT CATCCCATCTGTCCAATAGGCCAATTGGGAATTTTTATGAAATTACTTAATTAGGCAAGTGTAA ATAAATCTAGCCGAAAAAGATAGTTTGACAGGGATGTATCGCGTTGAAACCACAAATAAATGAA TGAAATACTTTGTAAATTATGCTCAAATGGACACGCCATGTACCAGTGACGAATAAAGTGGTTT GATGATGTTTAATATTTCTCGAATGAAAGACTTGTTAACATTGTGTGAAACGCGTGACCATAAT TAATTGAGATGTATAGTGATCGATAAATTCGATGGTAACTGTACAACAAATTTATTTAGTTAGA GGATCAACATGGTTTTTCAGTTGTGCTTTACTCAGATTAATTGTTTAGGTGCATTAAACATCAA AAGGTAAAATAAACAATTTCTTTTTTATTTGCTCTAAGTAGCTCGGGTTCATGGAAATTGTTGG TTCATATCATGCTGGCAGCAACAGCTCGGTAACAAGAATACTGATGCCAGCTACCTTTGGTAGT TGTAGCTAGCTCTACCTCCAGTTGCACATCTCTGTTTTAATTAACTAAAAGTTGGCCTTAGCTG TTTCTTGATAGAATGACAGTAGAATATATGTGTATGCATGAGCGGTACTCTGCTTGGTCATTGC ATAGTAGTTGGAAAAACTCGCATGTTTTGCTGCTCTAGAATTAGAGGTGGAATGTTGAATGCTC GGAAAACTACTTTTATAGGCGGTTACAATATAATTGGTACCCCCATTTTTGGAAGTGTTTAGCC AACCAAATGTTACATAGGGCCTATAGAAATCGACAGTTTTGTGCTAGTGGATTGCACAACTGCA TGTTAACAAATCTATTTTTTTGTATTTTAAGTTCGACTTTCAAGTCTTTAATTATTGTAGGCGC AAAAAGTATTTCATATTTTAATTATCACAAGTTCGCAATTTTTTCACACAAAATATGCATCTAG TATGTAGGATTCAAATCCGGGATCTCTCCCTTCATGTGTATCTTACTTATTACCATCTTACATA TGAAGCACTTTGTTAATTACTATGAAATAGACGTTGGTCTTCTAATTTAAACTCTCCTAAACTT GTAACACATATTAAAACCTTAAAGATTTATGTAGTGTTCATTTGAAGTGCGATTGAGGTGAACT AAAGTTATATATGATCCCAACAATTTTTTCATTAAATTTGTAAGGTCCATATTTTGGTAATATC CTTGTTCACTTATGTCAAGTTCCCATTGTATGTTTTGATGTGTTATGCAACTTGACATTTGTGA ATGTTCATAATAAAGGAAATATCAAAAAAAAAATTGACTAGGCCATATTTGAGGAAATATTGTA AGGATCTCATAGAACTTTGGATTAACTCAATTGGACTTAAGGTGTATTTTCTATGAATTTTAAA ACTTTAGACTTCATAAAGATCTGTTTGTAAAATCATCCTATTTTAAAAAGTAGATTCCGAATTT GTAACGAATATTTCGGCACCTAAATGTTCTTAAATGAAATAACTTTGACTAGAAAGTTACAAAC CTTGTCGAGCGCTATATTGTTTTATAGAAATTGTACCCGTCAACGTATGTAACAAAAAATTCTA ATGTAGACCTTAAAGCTTCTTATAATGAACTTTTGATCCCATTAACTACCTAAAATAGAAAAAC ATTAACTACAACATCTCAACAAGAACTATAATTGTCACATAACATTTGTCATTAGGCGACATCA TAGGAAAGAGTTACAAGTGGTTTCCTAATAGAACTGCCCTTAAAAATCAATTTTATTGATTTTT TCTTATGAGATCCGTATATAAAAATGACCCCACCTTTCAAATTACGCGACCCATTTGTGTTAAT AGACCTATTTTCACATGCAATTTTTCATAAGGAGCTATCTGTAAAAATAGTTTTCTTTTGTTAT ATGACCCTGGGCGGCATTAGTCATCTTCATAGGGACACGGAAATGGTTTGTAGTGGTTACGATG AAAAATGTGCATGTGCCTATTATTGAAATAAAAAGACTGCCAGCTTTTGGCCATCTAGACAATG CGTCAGAGACAACCATCCCAATCTATCCCCTCCCCATCCCATCTAGAAGTAAAAGTATAGGTAG GGTCTTCCAAAAATACACAAAATATTGAATCTGCATGGGAGGGGCAGAGGGTAGCTAATGAAGG GGTGGGAGAGGTGCAGAGGATCGATGGGCACGCGTGTGACACATTGCTTAGTTAAACAACATGC TACGTGTTAGGCAATAGCACGTTCTCTCTCTCTCTCTCTTTCTATCTATCTCTGTATATTTTTC CATAGAAATTACTTTAAGTATATGAGGTTATATCACACGGTCATGCATAGCGTTTAGAAGTTTC AATTGATTCAGATTTACAGGTATAGGGGTAGAATAGTTAAATTTTGATTTATTTTTGGGCTTCT GATTTGATCATCTGTACCTTTCAATTTTGAAAAGCCTGATCTTTAACATATTATAATATTCTGT GAAACTTTAGAACTTTTAAATATAATTTGTTGTGCGGTTTTCTTGATTTCTCTTACAATTGGTG GCTCGAGATGAAGGATATTAATTTCTGTTGTTTTTGACCTATTAATTAATCGTACCTTTGTATG GCTTCATTCAGCTTCCTGCATTCCTCGATGGTGGCATGATCATCATATGTGTCATCCATAAGGA CAATGAATACAATTATCTTGGCAAGGATCATCCGTGTGAGTGTTAAGTTTTCTTCATAGAACAG CGCATAGGACCAAAGATATGACTCCACTGCACGATCTCTAACATGACTTAGCTCGACATATCCA TAAAGATCTTTCCACCACCTGAAAATTAAAATGATCGATTGTTTTAGGTGCTTGTTTTGAAGTA TATTTAAGATATATATATTAGATCATTAGAAGCAATGAGTATTAATTGATTTATGATAGTAATA ATATGTACATAGCATATCAGGCATACCGAAAACACTAACAACATGAAGAGCCATATTGCTAGTT ATTTCAGTATATGTCACTAGTTATTGGATGTTTAAAGCCGCATAAAAGCCTCTAGTGTATTGCT GCTGCAAATGCTGAGACAAAGATTGATAAAATATTCGGATATTCCTTGAAGGCTAGCTGTCCTT CTTTTTTATCTGAGAGTGGACAAATTATATAGTAGTATAAACCTTAATTTTCTATTGTTCAATA CTTGAAACTACAGATAAAGCGATACCTAAACTCGGATACACTAACTACCTCATTAACATGACAT ATATTGACTACTTCTGGACAAAACATAAAGTTGTACATGTATTTTGTGATTAATTAACATTAAA TTGGTTGCACAAACAAAGCGTCAATTTGTCTAAAACGAGGTACACATTTTATGTATTTACCATT CAGTACATCGAAGGAACACAACGTCTCTCCAGAATTTTGCACTTATCTATATCTGTCTATCCTA TATAGTCAGAGCTAAAATATCCACATGTATTGATTAAGTTCATCTGAAATACAACAGCCTTTGG ATTCCTCCTTTACTTTGATCATAGCTACCCACATGTCATGTGTATTCAGAATTAACCACTTAGT ATAATTGCTTTAGAGCTCAAGATGTATTGAGCAACATCTCACCTAGAAAGTAAAAGCCATCGAA TCCCTCTCATACTTGTCATAACTATTCATGAGTTGAAATTACACATCAACTTCTACGTAGCTCA AATTATAGTCCTTTTAGGTATGACGAGTAAATAATTTCCAATAGGTTTTTATCAAGCTTTCCTA GAAAACAAATACTTCTAAATTCTCCACTGTAATGCACGGCCCATTCACTAATAACTAAATGTTC TCTAAATTATCTTTACTAACTGTAGAGCGAAGATCGAAAAACATATTTTGGTAGTTGTATCGTG CACATACACAGATTTGAGATTATTACAGTGGTTTGTTTCTGTCCTAAAGGGCACAATCAATTAC TTTCATGGTATATATTTACTTATTATATATATAAATATCAAATAAATACTCTTTTTTTAGATAA AGGAAATGAATAAACCTGGTATCTACATCCACAAGACATGTACAAAGACAAAGCAAAGAAAGAC TCTTACTGAGAAAAAGCTTTGAGCTCCTTCAAGTGGACATGCTGCAGAAGGTTAAATTCCAGCT TTGCAAGATCTAAAAGAACAACAATACATTCTTCCTCCTGTCCGTACTCCAGCATGTAATGCAA CATTTCAACTCTCTTGTAGGTTCTCGGTAATGGTAAGTGTAGGGCACGGTTGATTTGATTATCT AGAGGGGCCTTGAGCCTACTTCCGTCCCTCATTGATTCGAGGTGGTGCCTTGCAAAAGACATAG CTTCTTCAAGTTCTGGCTCATCATGGACAAGGAGGTGAGCTGCATTGTACAAACTTAATAATGC CCTTGGTTCATCAGCTATTGTATTGATGAACCTCCCATCCTCTCCTTTGAATTTTTCGAATACA T

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_014248 						
					
						PMCS
						0.311999816

Conservation Information
Conserved circRNAs	osi_circ_014248
PMCS	0.311999816

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							16066173-16061664(+)
16066082-16066163(-)
						
						Potential amino acid sequence
						
							MNLPSSPLNFSNTSLFSCRSPGICHWPLLELQSP*(+)
MSFARHHLESMRDGSRLKAPLDNQINRALHLPLPRTYKRVEMLHYMLEYGQEEECIVVLLDLAK
LEFNLLQHVHLKELKAFSQWWKDLYGYVELSHVRDRAVESYLWSYALFYEENLTLTRMILAKII
VFIVLMDDTYDDHATIEECRKLNEAIQRWDESAISLLPEYMKKFYRALLNYFRETEAQVEASDK
YRVTCMKKEMYSKNSKERMGGSSIQ*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	16066173-16061664(+) 16066082-16066163(-)
Potential amino acid sequence	MNLPSSPLNFSNTSLFSCRSPGICHWPLLELQSP(+) MSFARHHLESMRDGSRLKAPLDNQINRALHLPLPRTYKRVEMLHYMLEYGQEEECIVVLLDLAK LEFNLLQHVHLKELKAFSQWWKDLYGYVELSHVRDRAVESYLWSYALFYEENLTLTRMILAKII VFIVLMDDTYDDHATIEECRKLNEAIQRWDESAISLLPEYMKKFYRALLNYFRETEAQVEASDK YRVTCMKKEMYSKNSKERMGGSSIQ(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os04g0340300_circ_g.1

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