Release 7

In the seventh version, one new species (Panax ginseng) have been added to PlantcircBase, and novel circRNAs have been added to six species (Glycine max, Oryza sativa ssp. japonica, Oryza sativa ssp. indica, Populus, Solanum lycopersicum and Zea mays). Totally, 21 organisms were collected and the number of circRNA entries has been increased to 171,118. In this version, we collected plant circRNAs from seven publications (details here) that were published in 2021. Another seven literatures (details here) about plant circRNAs were also published, but these were not collected by PlantcircBase becauce of: (a) circRNA information were not provided by authors; (b) the genome of the organism was not well assembled; and so on.

Table 7.1 Summary of circRNA entries in PlantcircBase (Release 7)

Organisms Total circRNAs
Oryza sativa43,883 ADDED!
Arabidopsis thaliana52,393
Zea mays10,381 ADDED!
Solanum lycopersicum3,796 ADDED!
Triticum aestivum162
Glycine max9,734 ADDED!
Gossypium hirsutum3,944
Hordeum vulgare39
Poncirus trifoliata556
Solanum tuberosum1,728
Gossypium arboreum1,041
Gossypium raimondii1,478
Camellia sinensis3,174
Pyrus betulifolia258
Oryza sativa ssp. indica19,091 ADDED!
Nicotiana benthamiana8,559
Brassica rapa591
Cucumis sativus4,832
Echinochloa crus-galli825
Populus trichocarpa2,172 ADDED!
Panax ginseng NEW!245

Detailed statistic data could be found here.