Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os04g0340800_circ_g.1 |
ID in PlantcircBase | osa_circ_023461 |
Alias | NA |
Organism | Oryza sativa |
Position | chr4: 16101204-16101313 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | u-circRNA |
Identification method | CIRCexplorer |
Parent gene | Os04g0340800 |
Parent gene annotation |
Conserved hypothetical protein. (Os04t0340800-01);Conserved hypo thetical protein. (Os04t0340800-02) |
Parent gene strand | + |
Alternative splicing | Os04g0340300_circ_igg.1 Os04g0340550_circ_g.1 Os04g0340300_circ_g.1 Os04g0340300_circ_g.2 Os04g0340300_circ_igg.3 Os04g0340300_circ_g.4 Os04g0340300_circ_g.5 Os04g0340300_circ_igg.6 Os04g0340300_circ_igg.7 Os04g0340300_circ_ag.1 Os04g0340300_circ_igg.2 Os04g0340300_circ_igg.3 Os04g0341500_circ_igg.1 |
Support reads | 1 |
Tissues | shoot |
Exon boundary | No-No |
Splicing signals | TT-AG |
Number of exons covered | Os04t0340800-02:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.359350649 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |