Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os04g0340300_circ_ag.1 |
ID in PlantcircBase | osa_circ_023458 |
Alias | Os_ciR1368 |
Organism | Oryza sativa |
Position | chr4: 16068184-16157982 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ag-circRNA |
Identification method | find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | Os04g0340300_circ_igg.1 Os04g0340550_circ_g.1 Os04g0340300_circ_g.1 Os04g0340300_circ_g.2 Os04g0340300_circ_igg.3 Os04g0340300_circ_g.4 Os04g0340300_circ_g.5 Os04g0340300_circ_igg.6 Os04g0340300_circ_igg.7 Os04g0340300_circ_igg.2 Os04g0340300_circ_igg.3 Os04g0340800_circ_g.1 Os04g0341500_circ_igg.1 |
Support reads | 10 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.629545058 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | osa-miR5075 osa-miR2864.2 osa-miR168a-5p |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |