Address
Institute of Crop Sciences / Institute of Bioinformatics, Zhejiang University.
Any questions?
Please contact Fan's lab, qinjiechu@zju.edu.cn
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Download datasets from PlantcircBase
| Organisms | All entries | Genomic sequences | Back-splicing sequences |
|---|---|---|---|
| Arabidopsis thaliana | 52,393 | ath | ath |
| Brassica rapa | 591 | bra | bra |
| Cucumis sativus | 4,832 | csa | csa |
| Camellia sinensis | 3,174 | csi | csi |
| Echinochloa crus-galli | 825 | ecr | ecr |
| Gossypium arboreum | 1,041 | gar | gar |
| Gossypium hirsutum | 3,944 | ghi | ghi |
| Glycine max ADDED! | 9,734 | gma | gma |
| Gossypium raimondii | 1,478 | gra | gra |
| Hordeum vulgare | 39 | hvu | hvu |
| Nicotiana benthamiana | 8,559 | nbe | nbe |
| Oryza sativa ssp. japonica ADDED! | 43,883 | osa | osa |
| Oryza sativa ssp. indica ADDED! | 19,091 | osi | osi |
| Pyrus betulifolia | 258 | pbe | pbe |
| Panax ginseng NEW! | 245 | pbe | pbe |
| Populus trichocarpa ADDED! | 4,408 | pop | pop |
| Poncirus trifoliata | 556 | ptr | ptr |
| Solanum lycopersicum ADDED! | 3,796 | sly | sly |
| Solanum tuberosum | 1,728 | stu | stu |
| Triticum aestivum | 162 | tae | tae |
| Zea mays ADDED! | 10,381 | zma | zma |
| Organisms | Number of experimentally validated circRNAs | Potential function description | Number of circRNAs interacting with miRNAs | Number of circRNAs having coding potential |
|---|---|---|---|---|
| Arabidopsis thaliana | 98 | 2052 | 3066 | 7116 |
| Brassica rapa | / | 27 | 15 | 186 |
| Cucumis sativus | / | 1962 | 71 | 2291 |
| Camellia sinensis | 23 | / | 0 | 1056 |
| Echinochloa crus-galli | / | / | 0 | 180 |
| Gossypium arboreum | / | / | 0 | 469 |
| Gossypium hirsutum | 15 | 7 | 90 | 206 |
| Glycine max | 43 | 1187 | 641 | 3041 |
| Gossypium raimondii | / | / | 54 | 897 |
| Hordeum vulgare | 15 | / | 1 | 0 |
| Nicotiana benthamiana | 3 | / | 0 | 0 |
| Oryza sativa ssp. japonica | 137 | ath | 1480 | 9239 |
| Oryza sativa ssp. indica | 40 | 113 | 800 | 1849 |
| Pyrus betulifolia | 1 | 3 | 0 | 0 |
| Panax ginseng | 3 | / | 0 | 0 |
| Populus trichocarpa | 12 | 17 | 75 | 789 |
| Poncirus trifoliata | 11 | 556 | 2 | 189 |
| Solanum lycopersicum | 16 | 1476 | 65 | 919 |
| Solanum tuberosum | 11 | / | 321 | 0 |
| Triticum aestivum | 31 | 122 | 6 | 6 |
| Zea mays | 67 | 637 | 264 | 1631 |
Institute of Crop Sciences / Institute of Bioinformatics, Zhejiang University.
Please contact Fan's lab, qinjiechu@zju.edu.cn