Splice junction sequence |
TTAGTTTTCCCGAAAGGCTTGTTCATCGTTTCTCTGTTAATCTAATGTGTTGTGTTGCAGGCTG CAAATGATGATGACATATCAATAAGTTCTCATGGATatcccaaagatattaaaatgggaagact atatcgttcccacctccaaccaatggaaatggcaggtagcagtgtctgcattgtttgaagagcg acctgtgt
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 191 Transcript exons: 8350547-8350700,8352786-8352822 ATCCCAAAGATATTAAAATGGGAAGACTATATCGTTCCCACCTCCAACCAATGGAAATGGCAGG TAGCAGTGTCTGCATTGTTTGAAGAGCGACCTGTGTGGACAAGAGATTCCATAGTCCAACGACT ACTCGATAAAGGTCTTACATGCACACGCAAATGATGATGACATATCAATAAGTTCTCATGGAT
Transcript length: 821 Transcript exons: 8350547-8352822 ATCCCAAAGATATTAAAATGGGAAGACTATATCGTTCCCACCTCCAACCAATGGAAATGGCAGG TAGCAGTGTCTGCATTGTTTGAAGAGCGACCTGTGTGGACAAGAGATTCCATAGTCCAACGACT ACTCGATAAAGGTCTTACATGCACACATCATATGTTAAACAGATATGAAAAAGTGTAAAAACAC AAACAAGGAGAAAGATGATGATGTTAATGCGGATGAGGATTCTGAAGACTTGGATGATGAATAC GAGGAGGCTGCAAATGATGATGACATATCAATAAGTTCTCATGGATATCCCAAAGATATTAAAA TGGGAAGACTATATCGTTCCCACCTCCAACCAATGGAAATGGCAGGTAGCAGTGTCTGCATTGT TTGAAGAGCGACCTGTGTGGACAAGAGATTCCATAGTCCAACGACTACTCGATAAAGGTCTTAC ATGCACACATCATATGTTAAACAGGTTTCTTCTTAGGGCTGCATATTATTTCTCGGGTGGTCCA TTTCTTAGGTTCTGGATTAAAAGAGGCTATGATCCACGGAAAGATCCTGAATCTCGTGTGCTGC AAATGATGATGACATATCAATAAGTTCTCATGGATATCCCAAAGATATTAAAATGGGAAGACTA TATCGTTCCCACCTCCAACCAATGGAAATGGCAGGTAGCAGTGTCTGCATTGTTTGAAGAGCGA CCTGTGTGGACAAGAGATTCCATAGTCCAACGACTACTCGATAAAGGTCTTACATGCACACATC ATATGTTAAACAGGCTGCAAATGATGATGACATATCAATAAGTTCTCATGGAT
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Genomic sequence |
ATCCCAAAGATATTAAAATGGGAAGACTATATCGTTCCCACCTCCAACCAATGGAAATGGCAGG TAGCAGTGTCTGCATTGTTTGAAGAGCGACCTGTGTGGACAAGAGATTCCATAGTCCAACGACT ACTCGATAAAGGTCTTACATGCACACATCATATGTTAAACAGGTGAACAAATTTTATGCATTTC TTATGTGTATTATTACTGCAATAACCAACTTTCTGGAGTTTTCTCTGCAGGTTTCTTCTTAGGG CTGCATATTATTTCTCGGGTGGTCCATTTCTTAGGTTCTGGATTAAAAGAGGCTATGATCCACG GAAAGATCCTGAATCTCGTGTGTGAGTTCTATCTCTTTAAGTTTATTCATATTACAAATGCATG GTCTATGACACGGTAATGTAGAATTGTCATTTGTACACCTCAAAATAGAACAGAAATAGGCCGG TTTTACACCTCTGAACTTCCTCGTCTTCTGCAAAGTGTTTCGAGAATGATACATATTCTACTTG GCTCATTTGAGAGCGTATTTATCTTCCAATGCAGAAAGTGTTGGTGCTGACATTATCCGGGTTT TGGAAACTTGCTTGACATGAAATTTTCTTCTGTAGTTCATATTTTCCTGCATCCAGACTGCAGC TGTATGTCAAACCTCTTCACCTCTAACCTTTTTTATATTTTGTTTTTTTCAGATTCCAGAGAAT GGAATTCAGGGTTCCACCTGAATTAAAGGGTTATTGTGATTCCAATGCAACTAACAAGTAAGAT TTTCCATTTTTCCTTGTAAACTCAAGATATTTTTCTACTCAAGATTCTCAATTTGTAATATATA TGGACAGATAAACATATATCATGATAACATTTTCTTTGCAAGTATTGATTTGTGGTCAATTGTA TGAGAACATTATAATTTTTAAAACAATGCGAAGTGTGTCTGAATTCTCTAGAAACGTGTCATTT TCCGATTTTCAGTCACTTTCCGAGGATAGCAACCTAAATGTTCTCTTTTAACAGTTTCAAGATA GTTTCTCAGGGAACATATATATGAATTTACATGGAGAAATTGCAAATAAAACATTGGATATATG TTTGAAGAAACGGTCCAATTATAAAGGTGATGTTTTCTTTCTTTCTTATTTGTGACAGGTCAAA GCCAAGCTGGGATGACATTTGTGCGTTTAAAGTATTTCCTTTCAAATGCCAAACATTTCTACAG TTATTTGAACTTGACGATGAGTACATTCAACAAGAGATAAGAAAGCCTCCCAAGCAGACTACTT GTAATGTGAGTTATCAGCTAAAGCTTTTGTTAATGAAGTAGATTCCAAAAAAATTAGAGTCTTG CTTATTACAGATCAAACCTATACATGCACTTGCAAAAAATACCACTACCAAAACACTGCGTCAT CAATCACACACAAATGATATATTGAGTGGAAAATTGTTTTATGTGAGGTCTTGGTTATCTGTAC TGATTTGTTTTTGTTGCTAGTATAAAACAGGATGGTTCTCTGAAGCGCTGCTTGACAATTTGAG ACTCCGTGTAGCTGTGAGGTTTGTATCTGTGTTTCCTGAGCCAGGTTTCGAAGACGTTTTTAAA TCTATTCAAGAAGAGTTTGAGAGGTCTGAAAAGACACGTATTCAGAAAGATGCACTGCAACCAA GTCAACGGAATCACCAGGAAACAACTAAAGGTAAGATAGACAAAGCAATTTCAGTTCTTTTCAT CTTTACATGTTAGGCAGCCTAGTTAGTGATTGTTGACATGCATGGAGCCAAGTGCTTCTTTTTC AAATCTCAATGGTCTCAAAATTGTGTTAAAGCATGGTGAACTTGACTGGAGTTAATTTGTTGGA CATATTGTACGACGAATTTGTAAGTAAATATATAAGGGTGCACAATCACATGTGCCAGCCAAAA TCGAATGAGGCAGGCATTTTATATTGTCATACATCTCATGCTCTGCTTATTATCATTTGTCATC AAACACATTCTCCTTAAAAGAAGTATGGATTAACAGTTGTTGGTGTAAAATTATCCGCAGATAT GAAAAAGTGTAAAAACACAAACAAGGAGAAAGATGATGATGTTAATGCGGATGAGGATTCTGAA GACTTGGATGATGAATACGAGGAGGTAACCATGCTTACAAACTACTTCTTGTTTACTTCACCCA TTAGTTTTCCCGAAAGGCTTGTTCATCGTTTCTCTGTTAATCTAATGTGTTGTGTTGCAGGCTG CAAATGATGATGACATATCAATAAGTTCTCATGGAT |