Splice junction sequence |
CTGTCGTCTTCTTGACCTTTTTGGTGAACTCCTCCTTCCTCTCTATCGGCTATCGCTCGCTGCG TCTCTGTGTCTTGTTGCTTGGAGCAAGCTCTCCAGCgatcaatcggagagttcaatctcaacag acgaccataccctcgatacagtagctgctccgctcatcaacgtccatttcgccgcctttagccg tcaacgtt
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 143 Transcript exons: 8448213-8448279,8448480-8448555 GATCAATCGGAGAGTTCAATCTCAACAGACGACCATACCCTCGATACAGTAGCTGCTCCGCTCA TCATGAACTCCTCCTTCCTCTCTATCGGCTATCGCTCGCTGCGTCTCTGTGTCTTGTTGCTTGG AGCAAGCTCTCCAGC
Transcript length: 193 Transcript exons: 8448213-8448285,8448436-8448555 GATCAATCGGAGAGTTCAATCTCAACAGACGACCATACCCTCGATACAGTAGCTGCTCCGCTCA TCAACGTCCCTAAAACGGCGACGTGTAAGCTGTCGTCTTCTTGACCTTTTTGGTGAACTCCTCC TTCCTCTCTATCGGCTATCGCTCGCTGCGTCTCTGTGTCTTGTTGCTTGGAGCAAGCTCTCCAG C
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Genomic sequence |
GATCAATCGGAGAGTTCAATCTCAACAGACGACCATACCCTCGATACAGTAGCTGCTCCGCTCA TCAACGTCCATTTCGCCGCCTTTAGCCGTCAACGTTCTCTGGTTCTGTTGCCGTACAAAATTCT TAAAGGTCGCGTTTTTATGTAAGCGTAGGGTTTAGTTGTCGTCCCGCTCTTTTTAATTAGACTT TGTTAATTTAATTAGGTTAATTAGATAAGACCTAAAACGGCGACGTGTAAGCTGTCGTCTTCTT GACCTTTTTGGTGAACTCCTCCTTCCTCTCTATCGGCTATCGCTCGCTGCGTCTCTGTGTCTTG TTGCTTGGAGCAAGCTCTCCAGC |