Splice junction sequence |
ATCATTATGCAGTGTTTAGAGTTTTGCTGCCTGATGACGCACTTAGACAAATGACCACGGTCTA ATGCATTGTTGTAGTCGATTGATAATCAGGTTCTGGgatcaatcggagagttcaatctcaacag acgaccataccctcgatacagtagctgctccgctcatcaacgtccatttcgccgcctttagccg tcaacgtt
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 226 Transcript exons: 8448213-8448297,8450941-8451081 GATCAATCGGAGAGTTCAATCTCAACAGACGACCATACCCTCGATACAGTAGCTGCTCCGCTCA TCAACGTCCATTTCGCCGCCTCGGGAGTGTTCATAGACTTCAAGGGGAAAAGAGTTTGAACCAT CATTATGCAGTGTTTAGAGTTTTGCTGCCTGATGACGCACTTAGACAAATGACCACGGTCTAAT GCATTGTTGTAGTCGATTGATAATCAGGTTCTGG
Transcript length: 276 Transcript exons: 8448213-8448295,8450889-8451081 GATCAATCGGAGAGTTCAATCTCAACAGACGACCATACCCTCGATACAGTAGCTGCTCCGCTCA TCAACGTCCATTTCGCCGCAAAGAATAAAACGGATTTTCTATGCTTTTCCAAACACCACGGCAG GTGGTCTCGGGAGTGTTCATAGACTTCAAGGGGAAAAGAGTTTGAACCATCATTATGCAGTGTT TAGAGTTTTGCTGCCTGATGACGCACTTAGACAAATGACCACGGTCTAATGCATTGTTGTAGTC GATTGATAATCAGGTTCTGG
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Genomic sequence |
GATCAATCGGAGAGTTCAATCTCAACAGACGACCATACCCTCGATACAGTAGCTGCTCCGCTCA TCAACGTCCATTTCGCCGCCTTTAGCCGTCAACGTTCTCTGGTTCTGTTGCCGTACAAAATTCT TAAAGGTCGCGTTTTTATGTAAGCGTAGGGTTTAGTTGTCGTCCCGCTCTTTTTAATTAGACTT TGTTAATTTAATTAGGTTAATTAGATAAGACCTAAAACGGCGACGTGTAAGCTGTCGTCTTCTT GACCTTTTTGGTGAACTCCTCCTTCCTCTCTATCGGCTATCGCTCGCTGCGTCTCTGTGTCTTG TTGCTTGGAGCAAGCTCTCCAGCGTGAGTTAATCTAATCTCTGTAATGATTAATTACCTTCTTT TACGGTTTCTGGAATTGCATCTGTGTGTGAGCACTTGGTTTGAAATATGATTTAACTAGTGAAT TCGATAATGCTGTTCAATAAGAATGCTTAGAAAAGCCTTAACTGGGTTTTACTCACCACTCTTC TTATTGAATCTAGAAATTGAAAGTGTGAATTTTTGCGAGTTCTCTTATTCAAACTTCACTGCGA AAGGTGGAGTTTTTCGTCTCTGTTTTCTCCCTAATTCTTATAGTTTGAGCTAATGGTGTTAATC AGGCTCAAGAATAGATAAAATAAAATTATGGATTCAGATGCATGGGAAATTATCCATATACCTG AAAAGCCTTCATTGTCACCTGACCATCAGCCCACTGGTATGATTCAATCTCTAAGTTTGGTTTT TTAGTCTATCAAAGGTTCTTTATCTAAACTTCTTCTTCTGTGTGTGTGTGTGTGTTGTTCTTGT TGTTCACAGTGAAGGTATATGCTAGCCTAATCAAACCCAGATTTGCCAATACGATAGTGAGGTT TGTCATTCTTGTTTCGACTCTTGACTCGTTGATTCCAGTGCTGTAATCTCATGAGTGAATTTTT TTACTTTGCTATGATAGGCATTTATGTAAGATTGCTCCTCTAGAAGATCTTCGTCATGTTAAAA GGGTGAAGAAGAAGATTCTGCCAGATTGCGGTATCCCATTGTTAGTTTTCTTAGCGCGCTGATA CACCAATCATAAGATTATGAGGTTTTTATTGTAAGCTTATTGGACAGGTGAAACTCAGTTGACT GTCATCTTATGTCTAGCACCTGAGCACAACGATCAGTTGAGTGACATGCCACCTGATGTGCAGA GACTCGTTGATCCCTATGAGTTGAGTCCTTTTATTACACAAGTAGGTTATTTTTCTCTTATCTC ACCACTATTTGCTTCAAGGGTTTTTGATTCATTTAGCTTCCAAGTCAGAGATTTCTTTCTGCTC ATTCATTTATATTTTCAGTGCAATCTCATATTTCTGCTATAACTATGATAGGTATGCAAATATG CTGCGGTATCCAAAGAAGAGTGGGAAGAACAAAGTAAGATATGGCCTACTTCATTTCATCCACC AACCTAGTAAGCTCCATGTCTAGAATCAGTTTTGTGACCAAAAGAGTCTTTATTATCTTTCTGG TCTTTTTATTATATATGCTTTAGTCGTTCTAGAATAATCTTATTTCTTGATGGTTTCTATTGGT GCTCTTATCTGCATTGTAATAGCAATATATGTCTTTGTTTATAGTGCAACAGTCAATGATTTTT TACTTTTTGCATTTGGCAATGATAGCAATATAGATGGCATCGGTGGGTTCAGCGAGGAGGAAAC ACAATCAATCTGCAAGTTCATGAGAGTTGTTATTGATATGGCAGTATCTGGTCATACACCAGTA AGTATTTTCCATTGATCTACATAACGTCGATATCAAGTTTTAGACAACAGACCATTCATTTTTC ATGTACCATTTGCTTTTTTTAGCGCCTCAATCCTTGTTCTCTTGGTAGAAAGATTTACCATCGT TTCATTACATAGAAAATGATCTCAATTTACCACATTTCTAATGTACTTTTCAGCTTGTGAATGC TGCAGTGATAGTTGATCCTTCAGTTAGGCGAATAATAGCTAGTGAAACTGATCAAGTATATGCA TCATCTGCTCCTCGTGACATGACTAGCGCAGAGACCAGGCCCTTCGAGGAAACAGGGGAAATAT GTTTAAATGACACACTTGAAAAACAGAATGGTTCATTGTCTGCTCTTTCTTGTCTGAATCCCTG GCAATGGAGTTTGCAGCCGCATGACACTGAAAATTGTAGCCAGTGGCATCCTCTTAGGCATGCT TCCATGGTTGCCATTGAATCCTCTTCTGCCAGAGATAGAAATCTGTTTCCCAATCCATCCAAGA TTTTTGATCAGGATCATGTTCCGCCCTCAAATACAGATTCTCCGGCTAAAAAGCAGAAAACAAG CAGTCAGAGTCCAGACGTAAGTTCATTCCAACCAAGTTTTTTAATTTCCTCCACATGCTTTGAC TAGTACAGCATTCTCTCTTACACTTCTGAGTTATCGATAGGTCCAAAATGACAGCAGAGAAGAG ACTGTTAGAGATCCTTCAATGGAAAGGCCGTACCTCTGCACTGGTTATGACATTTTCCTCCTGT TGGAGCCTTGTACAATGTGAGTTTCTACATACATATTACCCTTTTAAACTCTGCAAGTGTGTGT ATCTAATAAAGTCGTGATATGTTCCCAAGGTGTGCTATGGCGCTTGTGCATCAAAGAATAAAAC GGATTTTCTATGCTTTTCCAAACACCACGGCAGGTGGTCTCGGGAGTGTTCATAGACTTCAAGG GGAAAAGAGTTTGAACCATCATTATGCAGTGTTTAGAGTTTTGCTGCCTGATGACGCACTTAGA CAAATGACCACGGTCTAATGCATTGTTGTAGTCGATTGATAATCAGGTTCTGG |