Plant Circular RNA Database

Detail information of AT1G76280_circ_g.3

			
						 General Information
					
						CircRNA Name
						AT1G76280_circ_g.3
					
						ID in PlantcircBase
						ath_circ_010455
					
						Alias
						At_ciR3386
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr1: 28620706-28621780  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							AT1G76280						
					
						Parent gene annotation
						
							Tetratricopeptide repeat (TPR)-like superfamily protein
							
						Parent gene strand
						-
					
						Alternative splicing
						
							1_circ_ag.2 1_circ_ag.3 AT1G75920_circ_g.1 1_circ_ag.2 AT1G75940_circ_g.1 AT1G75940_circ_g.2 AT1G75940_circ_g.3 AT1G75940_circ_g.4 AT1G75940_circ_g.5 AT1G75950_circ_g.1 AT1G76010_circ_g.1 AT1G76010_circ_g.2 AT1G76010_circ_g.3 AT1G76010_circ_g.4 AT1G76010_circ_g.5 AT1G76010_circ_g.6 AT1G76010_circ_g.7 AT1G76010_circ_g.8 AT1G76010_circ_g.9 AT1G76010_circ_g.10 AT1G76010_circ_g.11 AT1G76020_circ_g.1 AT1G76030_circ_g.1 AT1G76030_circ_g.2 AT1G76030_circ_g.3 AT1G76030_circ_g.4 AT1G76030_circ_g.5 AT1G76030_circ_g.6 AT1G76030_circ_g.7 AT1G76040_circ_g.1 AT1G76040_circ_g.2 AT1G76050_circ_g.1 AT1G76050_circ_g.2 AT1G76050_circ_g.3 AT1G76050_circ_g.4 AT1G76060_circ_g.1 AT1G76090_circ_g.1 AT1G76090_circ_g.2 AT1G76100_circ_g.1 AT1G76100_circ_g.2 AT1G76110_circ_g.1 AT1G76130_circ_g.1 AT1G76130_circ_g.2 AT1G76140_circ_g.1 AT1G76140_circ_g.2 AT1G76150_circ_g.1 AT1G76150_circ_g.2 AT1G76150_circ_g.3 AT1G76160_circ_g.1 AT1G76160_circ_g.2 AT1G76160_circ_g.3 AT1G76160_circ_g.4 AT1G76180_circ_g.1 AT1G76180_circ_g.2 AT1G76180_circ_g.3 AT1G76180_circ_g.4 AT1G76180_circ_g.5 AT1G76180_circ_g.6 AT1G76180_circ_g.7 AT1G76180_circ_g.8 AT1G76180_circ_g.9 AT1G76180_circ_g.10 AT1G76180_circ_g.11 AT1G76180_circ_g.12 AT1G76180_circ_g.13 AT1G76180_circ_g.14 AT1G76180_circ_g.15 AT1G76180_circ_g.16 AT1G76180_circ_g.17 AT1G76180_circ_g.18 AT1G76180_circ_g.19 AT1G76180_circ_g.20 AT1G76180_circ_g.21 AT1G76180_circ_g.22 AT1G76180_circ_g.23 AT1G76180_circ_g.24 AT1G76180_circ_g.25 AT1G76180_circ_g.26 AT1G76180_circ_g.27 AT1G76180_circ_g.28 AT1G76180_circ_g.29 AT1G76180_circ_g.30 AT1G76260_circ_g.1 AT1G76270_circ_g.1 AT1G76280_circ_g.1 AT1G76280_circ_g.2 AT1G76280_circ_g.4 AT1G76280_circ_g.5 AT1G76310_circ_g.1 AT1G76310_circ_g.2 AT1G76320_circ_g.1 AT1G76350_circ_g.1 AT1G76350_circ_g.2 AT1G76380_circ_g.1 AT1G76380_circ_g.2 AT1G76380_circ_g.3 AT1G76380_circ_g.4 AT1G76400_circ_g.1 AT1G76400_circ_g.2 AT1G76405_circ_g.1 AT1G76450_circ_g.1 AT1G76450_circ_g.2 AT1G76450_circ_g.3 AT1G76450_circ_g.4 AT1G76450_circ_g.5 AT1G76460_circ_g.1 AT1G76460_circ_g.2 AT1G76470_circ_g.1 AT1G76490_circ_g.1 AT1G76490_circ_g.2 AT1G76490_circ_g.3 AT1G76490_circ_g.4 AT1G76510_circ_g.1 AT1G76510_circ_g.2 AT1G76510_circ_g.3 AT1G76510_circ_g.4 AT1G76510_circ_g.5 AT1G76510_circ_g.6 AT1G76510_circ_g.7 AT1G76510_circ_g.8 AT1G76510_circ_g.9 AT1G76510_circ_g.10 1_circ_ag.11 AT1G76520_circ_g.1 AT1G76520_circ_g.2 1_circ_ag.3 AT1G76530_circ_g.1 AT1G76540_circ_g.1 AT1G76540_circ_g.2 AT1G76540_circ_g.3 AT1G76550_circ_g.1 AT1G76550_circ_g.2 AT1G76580_circ_g.1 AT1G76580_circ_g.2 AT1G76580_circ_g.3 AT1G76580_circ_g.4 AT1G76590_circ_g.1 AT1G76620_circ_g.1 AT1G76620_circ_g.2 AT1G76630_circ_g.1 AT1G76630_circ_g.2 AT1G76630_circ_g.3 AT1G76660_circ_g.1 AT1G76660_circ_g.2 AT1G76670_circ_g.1 AT1G76670_circ_g.2 AT1G76670_circ_g.3 1_circ_ag.4 AT1G76680_circ_g.1 1_circ_ag.2 1_circ_ag.3 1_circ_ag.4 AT1G76680_circ_g.5 AT1G76700_circ_g.1 1_circ_ag.2 AT1G76700_circ_g.3 AT1G76700_circ_g.4 AT1G76700_circ_g.5 1_circ_ag.6 1_circ_ag.7 1_circ_ag.8 AT1G76790_circ_g.1 AT1G76790_circ_g.2 AT1G76790_circ_g.3 AT1G76810_circ_g.1 AT1G76810_circ_g.2 						
					
						Support reads
						2
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT1G76280.2:3
AT1G76280.4:3
AT1G76280.5:3
AT1G76280.1:3
AT1G76280.3:3

General Information
CircRNA Name	AT1G76280_circ_g.3
ID in PlantcircBase	ath_circ_010455
Alias	At_ciR3386
Organism	Arabidpsis thaliana
Position	chr1: 28620706-28621780 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	find_circ
Parent gene	AT1G76280
Parent gene annotation	Tetratricopeptide repeat (TPR)-like superfamily protein
Parent gene strand	-
Alternative splicing	1_circ_ag.2 1_circ_ag.3 AT1G75920_circ_g.1 1_circ_ag.2 AT1G75940_circ_g.1 AT1G75940_circ_g.2 AT1G75940_circ_g.3 AT1G75940_circ_g.4 AT1G75940_circ_g.5 AT1G75950_circ_g.1 AT1G76010_circ_g.1 AT1G76010_circ_g.2 AT1G76010_circ_g.3 AT1G76010_circ_g.4 AT1G76010_circ_g.5 AT1G76010_circ_g.6 AT1G76010_circ_g.7 AT1G76010_circ_g.8 AT1G76010_circ_g.9 AT1G76010_circ_g.10 AT1G76010_circ_g.11 AT1G76020_circ_g.1 AT1G76030_circ_g.1 AT1G76030_circ_g.2 AT1G76030_circ_g.3 AT1G76030_circ_g.4 AT1G76030_circ_g.5 AT1G76030_circ_g.6 AT1G76030_circ_g.7 AT1G76040_circ_g.1 AT1G76040_circ_g.2 AT1G76050_circ_g.1 AT1G76050_circ_g.2 AT1G76050_circ_g.3 AT1G76050_circ_g.4 AT1G76060_circ_g.1 AT1G76090_circ_g.1 AT1G76090_circ_g.2 AT1G76100_circ_g.1 AT1G76100_circ_g.2 AT1G76110_circ_g.1 AT1G76130_circ_g.1 AT1G76130_circ_g.2 AT1G76140_circ_g.1 AT1G76140_circ_g.2 AT1G76150_circ_g.1 AT1G76150_circ_g.2 AT1G76150_circ_g.3 AT1G76160_circ_g.1 AT1G76160_circ_g.2 AT1G76160_circ_g.3 AT1G76160_circ_g.4 AT1G76180_circ_g.1 AT1G76180_circ_g.2 AT1G76180_circ_g.3 AT1G76180_circ_g.4 AT1G76180_circ_g.5 AT1G76180_circ_g.6 AT1G76180_circ_g.7 AT1G76180_circ_g.8 AT1G76180_circ_g.9 AT1G76180_circ_g.10 AT1G76180_circ_g.11 AT1G76180_circ_g.12 AT1G76180_circ_g.13 AT1G76180_circ_g.14 AT1G76180_circ_g.15 AT1G76180_circ_g.16 AT1G76180_circ_g.17 AT1G76180_circ_g.18 AT1G76180_circ_g.19 AT1G76180_circ_g.20 AT1G76180_circ_g.21 AT1G76180_circ_g.22 AT1G76180_circ_g.23 AT1G76180_circ_g.24 AT1G76180_circ_g.25 AT1G76180_circ_g.26 AT1G76180_circ_g.27 AT1G76180_circ_g.28 AT1G76180_circ_g.29 AT1G76180_circ_g.30 AT1G76260_circ_g.1 AT1G76270_circ_g.1 AT1G76280_circ_g.1 AT1G76280_circ_g.2 AT1G76280_circ_g.4 AT1G76280_circ_g.5 AT1G76310_circ_g.1 AT1G76310_circ_g.2 AT1G76320_circ_g.1 AT1G76350_circ_g.1 AT1G76350_circ_g.2 AT1G76380_circ_g.1 AT1G76380_circ_g.2 AT1G76380_circ_g.3 AT1G76380_circ_g.4 AT1G76400_circ_g.1 AT1G76400_circ_g.2 AT1G76405_circ_g.1 AT1G76450_circ_g.1 AT1G76450_circ_g.2 AT1G76450_circ_g.3 AT1G76450_circ_g.4 AT1G76450_circ_g.5 AT1G76460_circ_g.1 AT1G76460_circ_g.2 AT1G76470_circ_g.1 AT1G76490_circ_g.1 AT1G76490_circ_g.2 AT1G76490_circ_g.3 AT1G76490_circ_g.4 AT1G76510_circ_g.1 AT1G76510_circ_g.2 AT1G76510_circ_g.3 AT1G76510_circ_g.4 AT1G76510_circ_g.5 AT1G76510_circ_g.6 AT1G76510_circ_g.7 AT1G76510_circ_g.8 AT1G76510_circ_g.9 AT1G76510_circ_g.10 1_circ_ag.11 AT1G76520_circ_g.1 AT1G76520_circ_g.2 1_circ_ag.3 AT1G76530_circ_g.1 AT1G76540_circ_g.1 AT1G76540_circ_g.2 AT1G76540_circ_g.3 AT1G76550_circ_g.1 AT1G76550_circ_g.2 AT1G76580_circ_g.1 AT1G76580_circ_g.2 AT1G76580_circ_g.3 AT1G76580_circ_g.4 AT1G76590_circ_g.1 AT1G76620_circ_g.1 AT1G76620_circ_g.2 AT1G76630_circ_g.1 AT1G76630_circ_g.2 AT1G76630_circ_g.3 AT1G76660_circ_g.1 AT1G76660_circ_g.2 AT1G76670_circ_g.1 AT1G76670_circ_g.2 AT1G76670_circ_g.3 1_circ_ag.4 AT1G76680_circ_g.1 1_circ_ag.2 1_circ_ag.3 1_circ_ag.4 AT1G76680_circ_g.5 AT1G76700_circ_g.1 1_circ_ag.2 AT1G76700_circ_g.3 AT1G76700_circ_g.4 AT1G76700_circ_g.5 1_circ_ag.6 1_circ_ag.7 1_circ_ag.8 AT1G76790_circ_g.1 AT1G76790_circ_g.2 AT1G76790_circ_g.3 AT1G76810_circ_g.1 AT1G76810_circ_g.2
Support reads	2
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT1G76280.2:3 AT1G76280.4:3 AT1G76280.5:3 AT1G76280.1:3 AT1G76280.3:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGTGTCCCCCATTACAAAGGGATTTTACTATGAACAACAAAGATCTGCTGTCCAGACTAATTTC
CTTCTTGCACATTACACTGTAAGTCTCCATGACAAActgaagcattagctgctccgctagctca
gagtttttagattgtccacatgcatgaatcacatcattgaacgaccacctgaggaccctaatag
caaggatt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 735
Transcript exons: 28620706-28621149,28621403-28621585,28621673-28621780
CTGAAGCATTAGCTGCTCCGCTAGCTCAGAGTTTTTAGATTGTCCACATGCATGAATCACATCA
TTGAACGACCACCTGAGGACCCTAATAGCAAGGATTTTATTGTGACCTTTCGGCAAAGCCACTT
TTGAAGACGAATTGCAGTCCACAATGCGATCAGTTACTCCAAAAGCAAATTTCTCTGATCCTGT
TTCATCTTTTGATGGTACAGGAATATACAGTCTCGTGGAATGCAATTTTCCTCTGTTGGATTTA
ACAAAGAACTCTCCTCTTAAAGCTAGATACACCATGTGTTGCAATAATTCATATGCTGATTTCA
AATCCCCTAGCCTTGTAAAGGACCATATGAATCTTCTGAGAGAAAGTATATCCAGGTTATAGTG
GTTGACATAGTGTTTCCAGATATCATTGACAGTTGATAGATTGCGCTGAAAAACTGCAAGCTTG
AGAAGTGCTACATAAGTTATTCCATTCTTCCCCACTCTCCGTTGATCCATCAATTCCAAACATT
TACTAGCGTGATATACGCTTCTCGTTCGTGCACAGGCTCCAAGAAAAAAGTTATAGATAGGCAG
AAGAGGAGATATACGATCATCTTCTCTGACAGCGTGAATAAACTCTGATGCCTTATCTAAGTGT
CCCCCATTACAAAGGGATTTTACTATGAACAACAAAGATCTGCTGTCCAGACTAATTTCCTTCT
TGCACATTACACTGTAAGTCTCCATGACAAA
						
					

						Genomic sequence
						
							CTGAAGCATTAGCTGCTCCGCTAGCTCAGAGTTTTTAGATTGTCCACATGCATGAATCACATCA
TTGAACGACCACCTGAGGACCCTAATAGCAAGGATTTTATTGTGACCTTTCGGCAAAGCCACTT
TTGAAGACGAATTGCAGTCCACAATGCGATCAGTTACTCCAAAAGCAAATTTCTCTGATCCTGT
TTCATCTTTTGATGGTACAGGAATATACAGTCTCGTGGAATGCAATTTTCCTCTGTTGGATTTA
ACAAAGAACTCTCCTCTTAAAGCTAGATACACCATGTGTTGCAATAATTCATATGCTGATTTCA
AATCCCCTAGCCTTGTAAAGGACCATATGAATCTTCTGAGAGAAAGTATATCCAGGTTATAGTG
GTTGACATAGTGTTTCCAGATATCATTGACAGTTGATAGATTGCGCTGAAAAACTGCAAGCTGA
AAATAATATTAATCAGATAACAAAGAAAAAGAAGATAATTATGCAGATCAATGAAAATGAAACC
TCCATGTCAAGGAACAAACGAAAGTCCTTAAGGGACAGCAAAGCTAAGACAGAAATGGAGACAA
TAACAAAAAGATAAGTCCTCTCCAGATCTTCTACACTCCAAATTTTAAAGTTGGCATACGACCA
GCTCTTGAAAAAAACAAAAAGATTAAGGCACTGAAAAATGATATGTTCTTAACTAACCTTGAGA
AGTGCTACATAAGTTATTCCATTCTTCCCCACTCTCCGTTGATCCATCAATTCCAAACATTTAC
TAGCGTGATATACGCTTCTCGTTCGTGCACAGGCTCCAAGAAAAAAGTTATAGATAGGCAGAAG
AGGAGATATACGATCATCTTCTCTGACAGCGTGAATAAACTCTGATGCCTGAACAAGTATGCCC
AAAACTATTTACTCATCTCTTTTAGTCGCATTATGTAAGGAAATACTGGCTTTCGAGTGGAATA
ATTATACCTTATCTAAGTGTCCCCCATTACAAAGGGATTTTACTATGAACAACAAAGATCTGCT
GTCCAGACTAATTTCCTTCTTGCACATTACACTGTAAGTCTCCATGACAAA
						
					

			
		

Sequences
Splice junction sequence	AGTGTCCCCCATTACAAAGGGATTTTACTATGAACAACAAAGATCTGCTGTCCAGACTAATTTC CTTCTTGCACATTACACTGTAAGTCTCCATGACAAActgaagcattagctgctccgctagctca gagtttttagattgtccacatgcatgaatcacatcattgaacgaccacctgaggaccctaatag caaggatt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 735 Transcript exons: 28620706-28621149,28621403-28621585,28621673-28621780 CTGAAGCATTAGCTGCTCCGCTAGCTCAGAGTTTTTAGATTGTCCACATGCATGAATCACATCA TTGAACGACCACCTGAGGACCCTAATAGCAAGGATTTTATTGTGACCTTTCGGCAAAGCCACTT TTGAAGACGAATTGCAGTCCACAATGCGATCAGTTACTCCAAAAGCAAATTTCTCTGATCCTGT TTCATCTTTTGATGGTACAGGAATATACAGTCTCGTGGAATGCAATTTTCCTCTGTTGGATTTA ACAAAGAACTCTCCTCTTAAAGCTAGATACACCATGTGTTGCAATAATTCATATGCTGATTTCA AATCCCCTAGCCTTGTAAAGGACCATATGAATCTTCTGAGAGAAAGTATATCCAGGTTATAGTG GTTGACATAGTGTTTCCAGATATCATTGACAGTTGATAGATTGCGCTGAAAAACTGCAAGCTTG AGAAGTGCTACATAAGTTATTCCATTCTTCCCCACTCTCCGTTGATCCATCAATTCCAAACATT TACTAGCGTGATATACGCTTCTCGTTCGTGCACAGGCTCCAAGAAAAAAGTTATAGATAGGCAG AAGAGGAGATATACGATCATCTTCTCTGACAGCGTGAATAAACTCTGATGCCTTATCTAAGTGT CCCCCATTACAAAGGGATTTTACTATGAACAACAAAGATCTGCTGTCCAGACTAATTTCCTTCT TGCACATTACACTGTAAGTCTCCATGACAAA
Genomic sequence	CTGAAGCATTAGCTGCTCCGCTAGCTCAGAGTTTTTAGATTGTCCACATGCATGAATCACATCA TTGAACGACCACCTGAGGACCCTAATAGCAAGGATTTTATTGTGACCTTTCGGCAAAGCCACTT TTGAAGACGAATTGCAGTCCACAATGCGATCAGTTACTCCAAAAGCAAATTTCTCTGATCCTGT TTCATCTTTTGATGGTACAGGAATATACAGTCTCGTGGAATGCAATTTTCCTCTGTTGGATTTA ACAAAGAACTCTCCTCTTAAAGCTAGATACACCATGTGTTGCAATAATTCATATGCTGATTTCA AATCCCCTAGCCTTGTAAAGGACCATATGAATCTTCTGAGAGAAAGTATATCCAGGTTATAGTG GTTGACATAGTGTTTCCAGATATCATTGACAGTTGATAGATTGCGCTGAAAAACTGCAAGCTGA AAATAATATTAATCAGATAACAAAGAAAAAGAAGATAATTATGCAGATCAATGAAAATGAAACC TCCATGTCAAGGAACAAACGAAAGTCCTTAAGGGACAGCAAAGCTAAGACAGAAATGGAGACAA TAACAAAAAGATAAGTCCTCTCCAGATCTTCTACACTCCAAATTTTAAAGTTGGCATACGACCA GCTCTTGAAAAAAACAAAAAGATTAAGGCACTGAAAAATGATATGTTCTTAACTAACCTTGAGA AGTGCTACATAAGTTATTCCATTCTTCCCCACTCTCCGTTGATCCATCAATTCCAAACATTTAC TAGCGTGATATACGCTTCTCGTTCGTGCACAGGCTCCAAGAAAAAAGTTATAGATAGGCAGAAG AGGAGATATACGATCATCTTCTCTGACAGCGTGAATAAACTCTGATGCCTGAACAAGTATGCCC AAAACTATTTACTCATCTCTTTTAGTCGCATTATGTAAGGAAATACTGGCTTTCGAGTGGAATA ATTATACCTTATCTAAGTGTCCCCCATTACAAAGGGATTTTACTATGAACAACAAAGATCTGCT GTCCAGACTAATTTCCTTCTTGCACATTACACTGTAAGTCTCCATGACAAA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.193290109

Conservation Information
Conserved circRNAs	NA
PMCS	0.193290109

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							28621775-28620708(-)
						
						Potential amino acid sequence
						
							METYSVMCKKEISLDSRSLLFIVKSLCNGGHLDKASEFIHAVREDDRISPLLPIYNFFLGACAR
TRSVYHASKCLELMDQRRVGKNGITYVALLKLAVFQRNLSTVNDIWKHYVNHYNLDILSLRRFI
WSFTRLGDLKSAYELLQHMVYLALRGEFFVKSNRGKLHSTRLYIPVPSKDETGSEKFAFGVTDR
IVDCNSSSKVALPKGHNKILAIRVLRWSFNDVIHACGQSKNSELAEQLMLQFVMETYSVMCKKE
ISLDSRSLLFIVKSLCNGGHLDKASEFIHAVREDDRISPLLPIYNFFLGACARTRSVYHASKCL
ELMDQRRVGKNGITYVALLKLAVFQRNLSTVNDIWKHYVNHYNLDILSLRRFIWSFTRLGDLKS
AYELLQHMVYLALRGEFFVKSNRGKLHSTRLYIPVPSKDETGSEKFAFGVTDRIVDCNSSSKVA
LPKGHNKILAIRVLRWSFNDVIHACGQSKNSELAEQLMLQFVMETYSVMCKKEISLDSRSLLFI
VKSLCNGGHLDKASEFIHAVREDDRISPLLPIYNFFLGACARTRSVYHASKCLELMDQRRVGKN
GITYVALLKLAVFQRNLSTVNDIWKHYVNHYNLDILSLRRFIWSFTRLGDLKSAYELLQHMVYL
ALRGEFFVKSNRGKLHSTRLYIPVPSKDETGSEKFAFGVTDRIVDCNSSSKVALPKGHNKILAI
RVLRWSFNDVIHACGQSKNSELAEQLMLQFVMETYSVMCKKEISLDSRSLLFIVKSLCNGGHLD
KASEFIHAVREDDRISPLLPIYNFFLGACARTRSVYHASKCLELMDQRRVGKNGITYVALLKLA
VFQRNLSTVNDIWKHYVNHYNLDILSLRRFIWSFTRLGDLKSAYELLQHMVYLALRGEFFVKSN
RGKLHSTRLYIPVPSKDETGSEKFAFGVTDRIVDCNSSSKVALPKGHNKILAIRVLRWSFNDVI
HACGQSKNSELAEQLMLQ(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	28621775-28620708(-)
Potential amino acid sequence	METYSVMCKKEISLDSRSLLFIVKSLCNGGHLDKASEFIHAVREDDRISPLLPIYNFFLGACAR TRSVYHASKCLELMDQRRVGKNGITYVALLKLAVFQRNLSTVNDIWKHYVNHYNLDILSLRRFI WSFTRLGDLKSAYELLQHMVYLALRGEFFVKSNRGKLHSTRLYIPVPSKDETGSEKFAFGVTDR IVDCNSSSKVALPKGHNKILAIRVLRWSFNDVIHACGQSKNSELAEQLMLQFVMETYSVMCKKE ISLDSRSLLFIVKSLCNGGHLDKASEFIHAVREDDRISPLLPIYNFFLGACARTRSVYHASKCL ELMDQRRVGKNGITYVALLKLAVFQRNLSTVNDIWKHYVNHYNLDILSLRRFIWSFTRLGDLKS AYELLQHMVYLALRGEFFVKSNRGKLHSTRLYIPVPSKDETGSEKFAFGVTDRIVDCNSSSKVA LPKGHNKILAIRVLRWSFNDVIHACGQSKNSELAEQLMLQFVMETYSVMCKKEISLDSRSLLFI VKSLCNGGHLDKASEFIHAVREDDRISPLLPIYNFFLGACARTRSVYHASKCLELMDQRRVGKN GITYVALLKLAVFQRNLSTVNDIWKHYVNHYNLDILSLRRFIWSFTRLGDLKSAYELLQHMVYL ALRGEFFVKSNRGKLHSTRLYIPVPSKDETGSEKFAFGVTDRIVDCNSSSKVALPKGHNKILAI RVLRWSFNDVIHACGQSKNSELAEQLMLQFVMETYSVMCKKEISLDSRSLLFIVKSLCNGGHLD KASEFIHAVREDDRISPLLPIYNFFLGACARTRSVYHASKCLELMDQRRVGKNGITYVALLKLA VFQRNLSTVNDIWKHYVNHYNLDILSLRRFIWSFTRLGDLKSAYELLQHMVYLALRGEFFVKSN RGKLHSTRLYIPVPSKDETGSEKFAFGVTDRIVDCNSSSKVALPKGHNKILAIRVLRWSFNDVI HACGQSKNSELAEQLMLQ(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015

circRNA

Detail information of AT1G76280_circ_g.3

Address

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