Splice junction sequence |
TGAAACACACACACACTCTATTGAATCCAACTATGATGACAGCTGCAAAGTCCAACTAATTTCT TCCAAGGAAGAAGAAAAAGAAGAAGACAACCATCAGgtggtttatgccggttaatgttctgctc acattcatgattggttcgttactcggctggattgttattgtcataactaagcctccttcacagc ttcgtggt
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 460 Transcript exons: 28718769-28718893,28718987-28719108,28719140-28719352 GTGGTTTATGCCGGTTAATGTTCTGCTCACATTCATGATTGGTTCGTTACTCGGCTGGATTGTT ATTGTCATAACTAAGCCTCCTTCACAGCTTCGTGGTCTCATCATTAGTTGTTGTGCTTCTGGGA ATTTGGGGACTATGCCTCTCATTATAATCCCAGCCATTTGCAAGGAGAAAGGAGGTCCCTTTGG AGATTCTGAGAGTTGCGAGAAATACGGAATGGGTTATGTTACACTGTCCATGACTGCTTTTTTT ATCAGTGTGTATAAACATGACACTAATTGGTATGTATCAGGCGGGAACGGTTTACTCATGGACT TATATATAAATCTTATGCGTGTGCTATCAAACTCTCCCGTTGAAACACACACACACTCTATTGA ATCCAACTATGATGACAGCTGCAAAGTCCAACTAATTTCTTCCAAGGAAGAAGAAAAAGAAGAA GACAACCATCAG
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Genomic sequence |
GTGGTTTATGCCGGTTAATGTTCTGCTCACATTCATGATTGGTTCGTTACTCGGCTGGATTGTT ATTGTCATAACTAAGCCTCCTTCACAGCTTCGTGGTCTCATCATTAGTTGTTGTGCTTCTGGTA CAAACCTTGACATGATTTTAGAATCTTTTTGTCTTTCTTTGTATCGTATGTTTTGCTTATGAAT GTGATGATGAATGAAACCAAAAACAGGGAATTTGGGGACTATGCCTCTCATTATAATCCCAGCC ATTTGCAAGGAGAAAGGAGGTCCCTTTGGAGATTCTGAGAGTTGCGAGAAATACGGAATGGGTT ATGTTACACTGTCCATGACTGTTAGTTCTTCCTCTCTTGTCTCTCTTCAAGGCTTTTTTTATCA GTGTGTATAAACATGACACTAATTGGTATGTATCAGGCGGGAACGGTTTACTCATGGACTTATA TATAAATCTTATGCGTGTGCTATCAAACTCTCCCGTTGAAACACACACACACTCTATTGAATCC AACTATGATGACAGCTGCAAAGTCCAACTAATTTCTTCCAAGGAAGAAGAAAAAGAAGAAGACA ACCATCAG |