Splice junction sequence |
TTTCTCTGCTGCTGGTCTTCCACATAATGAAATAGCTGCTCAGATTTGTCGTCAGGCTGGTCTA GTCAAGCGTTTGGAAAAGACTGTTGATCTACTTGAGgagctgctttgatttggtttatcgttga tctgtgaaaatggggacgaatgatctcgacatcgaagaagggactctggagatcggcatgggta agtcaccg
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 625 Transcript exons: 28534097-28534185,28534390-28534445,28534540-28534638,28 534751-28534810,28534920-28535031,28535121-28535329 GAGCTGCTTTGATTTGGTTTATCGTTGATCTGTGAAAATGGGGACGAATGATCTCGACATCGAA GAAGGGACTCTGGAGATCGGCATGGAGTATAGAACTGTTTCTGGTGTTGCTGGACCATTGGTCA TTCTTGACAAAGTGAAGGGTCCAAAGTACCAGGAGATTGTTAATATTCGCTTAGGAGATGGATC AACGAGACGTGGTCAGGTTTTGGAAGTTGATGGCGAGAAAGCAGTTGTGCAGGTTTTTGAAGGA ACATCTGGAATTGACAACAAGTTTACAACCGTGCAATTCACAGGAGAGGTTTTGAAAACACCTG TATCATTGGACATGCTTGGGCGCATATTTAACGGTTCAGGAAAGCCGATTGATAATGGCCCTCC TATTCTGCCAGAAGCATACCTTGATATTTCAGGAAGTTCAATCAACCCCAGTGAAAGAACCTAT CCTGAAGAGATGATACAGACAGGCATATCGACCATCGATGTCATGAATTCCATTGCTCGTGGAC AGAAGATTCCACTTTTCTCTGCTGCTGGTCTTCCACATAATGAAATAGCTGCTCAGATTTGTCG TCAGGCTGGTCTAGTCAAGCGTTTGGAAAAGACTGTTGATCTACTTGAG
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Genomic sequence |
GAGCTGCTTTGATTTGGTTTATCGTTGATCTGTGAAAATGGGGACGAATGATCTCGACATCGAA GAAGGGACTCTGGAGATCGGCATGGGTAAGTCACCGATCATGGATCACACTATATTGATTTTGT TTCTAGTTCTTCCTCTGTTTTTGATTGTGTTGATTCAGAACTTATCCTCCAAATCTGGGTTTTT TTATAGGGATATTCTAGTACTCTGGCTCTTTTTGACCTTGCTGATGTTGTTAACTATTTTTCTT TAGTATAAGACTGATTCATGAATCTTTTGAATTGCAGAGTATAGAACTGTTTCTGGTGTTGCTG GACCATTGGTCATTCTTGACAAAGTGAAGGTAAGAGCATCGTTTGATTCATTAAGCAATGCTAA TTTACTTTGTGAGGGTAACTTAACTGACTAAAACTTCTTGGAATGTAATGATAAATCAGGGTCC AAAGTACCAGGAGATTGTTAATATTCGCTTAGGAGATGGATCAACGAGACGTGGTCAGGTTTTG GAAGTTGATGGCGAGAAAGCAGTTGTGCAGGTTTAGGATTGTTTTTTGTCCATGTTACTTCAAA CATTGAATAATACTTAAACACAAACTTCGTGAATCTAGTCACTTCTTCAGTGACTTACTTATCA CTTAAGGGTTTCAGGTTTTTGAAGGAACATCTGGAATTGACAACAAGTTTACAACCGTGCAATT CACAGGAGAGGTAATTTACCATAAAAATCCTTCGTCCCTCCAGCATTTCGCAGATTTGTTGAAA TGATTGGTTGATTTCTGCTTCCTGCATTTTTTTTAAACCGGTTTGTGTCTTTCAGGTTTTGAAA ACACCTGTATCATTGGACATGCTTGGGCGCATATTTAACGGTTCAGGAAAGCCGATTGATAATG GCCCTCCTATTCTGCCAGAAGCATACCTTGATATTTCAGGTGAGCAACTAAGAGGACAATTATT CCATTGAGATCTCTGAAGCAATGTTTCATTTGTTCTTAAAAATGTCAATTCCTTATATTGATAG GAAGTTCAATCAACCCCAGTGAAAGAACCTATCCTGAAGAGATGATACAGACAGGCATATCGAC CATCGATGTCATGAATTCCATTGCTCGTGGACAGAAGATTCCACTTTTCTCTGCTGCTGGTCTT CCACATAATGAAATAGCTGCTCAGATTTGTCGTCAGGCTGGTCTAGTCAAGCGTTTGGAAAAGA CTGTTGATCTACTTGAG |