Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | BGIOSGA032547_circ_g.7 |
| ID in PlantcircBase | osi_circ_008793 |
| Alias | Chr10:3914374_3918963(ZS97RS2), Chr10:3668712_3673298(MH63RS2) |
| Organism | Oryza sativa ssp. indica |
| Position | chr10: 3048891-3053480 JBrowse» |
| Reference genome | Oryza_indica.ASM465v1.42 |
| Type | ei-circRNA |
| Identification method | CIRI2, CIRCexplorer2, CIRI2, CIRCexplorer2 |
| Parent gene | BGIOSGA032547 |
| Parent gene annotation | NA |
| Parent gene strand | + |
| Alternative splicing | BGIOSGA032547_circ_g.6 BGIOSGA032547_circ_g.8 BGIOSGA032547_circ_g.9 BGIOSGA032547_circ_g.10 BGIOSGA032547_circ_g.11 BGIOSGA032547_circ_g.12 BGIOSGA032547_circ_g.13 BGIOSGA032547_circ_g.14 BGIOSGA032547_circ_g.15 BGIOSGA032547_circ_g.16 |
| Support reads | NA |
| Tissues | root, leaf, panicle |
| Exon boundary | No-Yes |
| Splicing signals | GT-CA |
| Number of exons covered | BGIOSGA032547-TA:8 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Zhou et al., 2021 |