Detailed infomation of each circRNA
General Information | |
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CircRNA Name | EPlOSAG00000028235_circ_ig.11 |
ID in PlantcircBase | osa_circ_009990 |
Alias | Os_ciR7165 |
Organism | Oryza sativa |
Position | chr11: 26559637-26560820 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ig-circRNA |
Identification method | CIRCexplorer, find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | Os11g0661400_circ_igg.1 Os11g0661400_circ_igg.2 EPlOSAG00000028235_circ_ig.1 EPlOSAG00000028235_circ_ig.2 EPlOSAG00000028235_circ_ig.3 EPlOSAG00000028235_circ_ig.4 EPlOSAG00000028235_circ_ig.5 EPlOSAG00000028235_circ_ig.6 EPlOSAG00000028235_circ_ig.7 EPlOSAG00000028235_circ_ig.8 EPlOSAG00000028235_circ_ig.9 EPlOSAG00000028235_circ_ig.10 EPlOSAG00000028235_circ_ig.12 |
Support reads | 2/1 |
Tissues | root/shoot |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | osi_circ_003221* |
PMCS | 0.327470249 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015;Chu et al., 2017 |