Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Os08g0318500_circ_g.15 |
ID in PlantcircBase | osa_circ_036685 |
Alias | Os_ciR5594 |
Organism | Oryza sativa |
Position | chr8: 13751887-13756138 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ei-circRNA |
Identification method | CIRCexplorer, find_circ |
Parent gene | Os08g0318500 |
Parent gene annotation |
Sec8 exocyst complex component specific domain containing protei n. (Os08t0318500-01) |
Parent gene strand | - |
Alternative splicing | Os08g0318500_circ_g.1 Os08g0318500_circ_g.2 Os08g0318500_circ_g.3 Os08g0318500_circ_g.4 Os08g0318500_circ_g.5 Os08g0318500_circ_g.6 Os08g0318500_circ_g.7 Os08g0318500_circ_g.8 Os08g0318500_circ_g.9 Os08g0318500_circ_g.10 Os08g0318500_circ_g.11 Os08g0318500_circ_g.12 Os08g0318500_circ_g.13 Os08g0318500_circ_g.14 Os08g0318500_circ_g.16 Os08g0318500_circ_g.17 |
Support reads | 3/4 |
Tissues | root/root |
Exon boundary | Yes-No |
Splicing signals | CT-AC |
Number of exons covered | Os08t0318500-01:4 |
Conservation Information | |
---|---|
Conserved circRNAs | osi_circ_007665* osi_circ_017768 |
PMCS | 0.198870806 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Ye et al., 2015;Chu et al., 2017 |