Splice junction sequence |
GATCATCTCTGACTGTTGTCAGCGTTTTTTTCTCAGAGAGCCGGTTTCTAGTGCTTCTGGTAGA GCAACATCGAGCATGTCCAGTGACGAAAGAAATCAGagacagggagcgaagatgatgctctttt ggacctgagtgacgatgacttctttgtcaacggaagttcaagtgacgaagcagatgcggatgat gagtggac
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 168 Transcript exons: 1126848-1126968,1127210-1127256 AGACAGGGAGCGAAGATGATGCTCTTTTGGACCTGAGTGACGATGACTTCTTTGTCAACGGAAG TTCAAGTGACGAAGCAGATGCGGATGATGAGTGGACTGATAAAAGCACAAAGTACGCCTTCTGG TAGAGCAACATCGAGCATGTCCAGTGACGAAAGAAATCAG
Transcript length: 179 Transcript exons: 1126848-1126962,1127193-1127256 AGACAGGGAGCGAAGATGATGCTCTTTTGGACCTGAGTGACGATGACTTCTTTGTCAACGGAAG TTCAAGTGACGAAGCAGATGCGGATGATGAGTGGACTGATAAAAGCACAAAAGAGCCGGTTTCT AGTGCTTCTGGTAGAGCAACATCGAGCATGTCCAGTGACGAAAGAAATCAG
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Genomic sequence |
AGACAGGGAGCGAAGATGATGCTCTTTTGGACCTGAGTGACGATGACTTCTTTGTCAACGGAAG TTCAAGTGACGAAGCAGATGCGGATGATGAGTGGACTGATAAAAGCACAAAGTACGCCTTGTAA ATGTGGATTAGTTTCTTTAATCTCAATACTTAGTGTAGTTTATCGATTGTATTAGTGTATAACA TGAGAGATGAAGAAGAGTCAACGAGGCTAGTGGTGTATTCACCTCTAAATTCCATATGATTTCT ATGCTAGAAGAAGTCGATTGTTGACTCTTTTCTGGCTTAACGTTTCCAGTAAAGATCATCTCTG ACTGTTGTCAGCGTTTTTTTCTCAGAGAGCCGGTTTCTAGTGCTTCTGGTAGAGCAACATCGAG CATGTCCAGTGACGAAAGAAATCAG |