Splice junction sequence |
TGAGTGAGTTTTCATTTCTTAAGGCCTGAATGAGCTTTTTTTGTGCAGTGGAGTTTGACCATAG CGGATCTTATCTTGGCATTGCTGCTTCAGATATAAGgtgacagatgcttccgaaaacgacgtga attacacggctgctgcttttcatcctgatggtctcattcttggaactggtaccgctcaatctat tgttaaga
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 335 Transcript exons: 1229504-1229623,1229717-1229794,1229893-1229977,1230065- 1230116 GTGACAGATGCTTCCGAAAACGACGTGAATTACACGGCTGCTGCTTTTCATCCTGATGGTCTCA TTCTTGGAACTGGTACCGCTCAATCTATTGTTAAGATTTGGGATGTAAAAAGTCAGGCAAATGT GGCAAAGTTTGGTGGACACAATGGAGAAATCACCTCTATATCATTCTCTGAAAACGGTTATTTC CTTGCGACTGCTGCACTGGATGGTGTTAGGTTGTGGGACTTGCGCAAGTTAAAGAACTTCCGAA CCTTTGACTTTCCAGATGCAAACTCGGTGGAGTTTGACCATAGCGGATCTTATCTTGGCATTGC TGCTTCAGATATAAG
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Genomic sequence |
GTGACAGATGCTTCCGAAAACGACGTGAATTACACGGCTGCTGCTTTTCATCCTGATGGTCTCA TTCTTGGAACTGGTACCGCTCAATCTATTGTTAAGATTTGGGATGTAAAAAGTCAGGTAAAAAC TCTTTGACCTTCCTTGCTCATCAACTGTTGTCACTTGTAAGTTTGTTCTCACTTCACTCTCATC TCTATCTCTGTCGTTTGATAGGCAAATGTGGCAAAGTTTGGTGGACACAATGGAGAAATCACCT CTATATCATTCTCTGAAAACGGTTATTTCCTTGCGGTGGGTACATTGACTGATTGACCTAAACT AAGTAGAAAGAAGGATAGCACCAGGTTCCTTTTGACTGACCAATATTTACTATTCTTTAAATTG TACAGACTGCTGCACTGGATGGTGTTAGGTTGTGGGACTTGCGCAAGTTAAAGAACTTCCGAAC CTTTGACTTTCCAGATGCAAACTCGGGTATTCAACTACCTGAGCACTCTTACTAGTCTATTTTG TTGAGTGAGTTTTCATTTCTTAAGGCCTGAATGAGCTTTTTTTGTGCAGTGGAGTTTGACCATA GCGGATCTTATCTTGGCATTGCTGCTTCAGATATAAG |