Splice junction sequence |
GCAGCTGGAGGAATATCCAACATGTGGAGGATAACAGGTTGGTCAGCACCAAGCATGATACCCC TTGCAATCATAGGTACAAGAGCATATCCGATTTGTCcttggacaatactccagtctccattgcg acaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatcggagtatact cccatgga
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 861 Transcript exons: 1189601-1189712,1189805-1189940,1190030-1190307,1190465- 1190640,1190747-1190905 CTTGGACAATACTCCAGTCTCCATTGCGACAAGTTACAGGGAAGGAGTAGATAAGTCCTGATGG AACGCTGTAAGAGCCATCGGAGTATACTCCCATGGAAACGAACGTACCCTCTGGAGTTCCAAGG ACCCAGTCACGGATGTGGTCACAAGCAGAGCTAGCAGCAGAGAGCGCACTAGACAACTTCCTCG CCTTGATGATTGCAGCTCCACGTTGTTGAACTGTAGAGATAAATTCTCCGTCCAACCATGCATC GTCCTTGACGAGCTCACGGACAGGCTTCTCTCCAGACGAGGTCTGCACTTTAGCATGGTTGACA TCTGGGTACTGTGAGGATGAGTGGTTTCCCCAGATGATCACGTTCTTAACATCAGACACTGGCA CGCTCAACCTCTCAGAGATCTGTCCCAAAGCCCTGTTGTGGTCAAGCCTTGTCAAACAAGAGAT GTTCTTTTCAGGGATTGATGGTGCAAATTCCTTGAGGATCAATGCGTTGGTGTTTGCCGGGTTG GCCACAACAAGAACCTTGCAGTTAGGAGCGGCATGCTTCTCCAAGGCAGCAGCCTGAGACTTGT AGATGGAAACATTCTTGGACATCACATCCTTCCTCTCCATACCTTCTTTCCTCGGGAAACCACC AACCATAACAGCAACATTGACTCCAGTACATCCCTCAACGGCATCAGTTGTAGCAACAACACCT TTAAGAAGAGGGAAAGCAGCATCGATCAACTCCATCTTAACACCGTTCAAAGCTTCAGCAGCTG GAGGAATATCCAACATGTGGAGGATAACAGGTTGGTCAGCACCAAGCATGATACCCCTTGCAAT CATAGGTACAAGAGCATATCCGATTTGTC
|
Genomic sequence |
CTTGGACAATACTCCAGTCTCCATTGCGACAAGTTACAGGGAAGGAGTAGATAAGTCCTGATGG AACGCTGTAAGAGCCATCGGAGTATACTCCCATGGAAACGAACGTACCCTGACAATTTGAATCA AAGAAAGAACTCATATTAGATTAACTGTTACAAAAAAACAGCACTGCAAATAACGGGGAAGAGT TTTATTATGAACCTCTGGAGTTCCAAGGACCCAGTCACGGATGTGGTCACAAGCAGAGCTAGCA GCAGAGAGCGCACTAGACAACTTCCTCGCCTTGATGATTGCAGCTCCACGTTGTTGAACTGTAG AGATAAATTCTCCGTCCAACCTACAGAATGAGCAATATATTTAAGTGAAACTAGATTTTGCTTC CAGAGAAGAGAAAGGGTCTTAAGTTCTATGGCATGTTATACATACCATGCATCGTCCTTGACGA GCTCACGGACAGGCTTCTCTCCAGACGAGGTCTGCACTTTAGCATGGTTGACATCTGGGTACTG TGAGGATGAGTGGTTTCCCCAGATGATCACGTTCTTAACATCAGACACTGGCACGCTCAACCTC TCAGAGATCTGTCCCAAAGCCCTGTTGTGGTCAAGCCTTGTCAAACAAGAGATGTTCTTTTCAG GGATTGATGGTGCAAATTCCTTGAGGATCAATGCGTTGGTGTTTGCCGGGTTGGCCACAACAAG AACCTGAAAAAAAAAAGACAAAACGAGAGCGAATGTGTGAGCAAGAGAGTCGTAAACTAGAACC CAATAGAGAACACAAAGCATCTGTTACACTCCAATGAACAGAGAAGATTGGATGCAGTGGCTTC ATTTAACTTAAAAAGCAAACAGATCGTATCACCTTGCAGTTAGGAGCGGCATGCTTCTCCAAGG CAGCAGCCTGAGACTTGTAGATGGAAACATTCTTGGACATCACATCCTTCCTCTCCATACCTTC TTTCCTCGGGAAACCACCAACCATAACAGCAACATTGACTCCAGTACATCCCTCAACGGCATCA GTTGTAGCAACAACACCTGATAATAATACACATCAAATATTCATCTTCTCCTTTCCCACTTATA CAAAACAACTTATGACACGGAATGCAAATATCCACAGCAAAACAAAACCCTTAACTACCTTTAA GAAGAGGGAAAGCAGCATCGATCAACTCCATCTTAACACCGTTCAAAGCTTCAGCAGCTGGAGG AATATCCAACATGTGGAGGATAACAGGTTGGTCAGCACCAAGCATGATACCCCTTGCAATCATA GGTACAAGAGCATATCCGATTTGTC |