Splice junction sequence |
TTATGATCACAGATGAATCAAAGATCAAATCAGCTAAAATTCCACACTCTAACCAAGTTGTTCC ATGATTTCAGACCTCAACCTCCTCCAGAGAATAGTTcgcgggattgtccaagcgatcaagctcg tggccatcggggatactcccagagatatactgccagccaaggatgtcacattccaaatcagcat ccaaaagt
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 1356 Transcript exons: 1186452-1187164,1187260-1187484,1187589-1188006 CGCGGGATTGTCCAAGCGATCAAGCTCGTGGCCATCGGGGATACTCCCAGAGATATACTGCCAG CCAAGGATGTCACATTCCAAATCAGCATCCAAAAGTGTATCCCAGAAATACTTCATTCCCCATT TCCATGGAAGGAGAAGAAACTTCACAGCAAAGCTTGAAACAATCACTCTTATTCTGTTATGCAT CCATCCGGTAGCCCAAAGCTCTCTCATTCCGGCATCCACCAACGGATAACCGGTCCTGCCTTGT CTCCAGGCCTTGAACTTATCAACATCAGCATCCCAAGGGAAAAACCGAAGATGACTCAACAACG ATTGCTCGTGAGTAAACGGGAAGTTGAAACATATATACCGAGAATACTCTCTTAAACCGATTCC CCTAAGAAAAAGATCTGCACTTTCTTCTCCTTCACTGTTCTTATCTCTTGCCCATATAATTTGT TTCATCCGGGCACACTGGAAAACGTGTCTGACGCTTATTTCCCCGAAATGGAGATACGGAGAAA GTAGTGAAGTAGAATTCCCAACAACTTTCTTGCTGTTCTTTGCATAATCTATCAACTGCTTCTC GATGAACTCATTTAGTAACTTATCAGCATTGCTCCATCCTGGAGACCAAGCTCTAGTTAACAAC GCATTGCTCGGTTTCTCGGCCTCATTCTCCAGCCCTAGTTCTTCAATCGAACACGCCCAAATCG CTTCAGCCGCTGCAGTTATTGGCATCAACCGCCAAGGAGGAGGAAGCATAACGGATTCAATCGA CATATCTAAGCATTTCTTCCAGTAAGAATTGAAACTCGTAAAAGGTTTGCCCTTTTCGCAGTAT ATCTCCCACGGTTCATACAATAGATCTCCATTGTAGCTTTGCACAGAGATCCCACGTTCCACCA GCTTCTCCTTTACGGTATGGTCCCGAACTAACGAAACAGGATCATAGAGGTGGTTAAAGACGAC TTTTGTAGCACCGGTAACGCGGATACAATCCAAGATCGCTGAAATCGTGTTGTGGGTTTTGATT AAAGTGAGGTCAGATCCAAGAGCCTTCAAGGATTGAGATAAGTGAGCAAGTGATTGTTTCATCC ACCATCTTGAAGCTCTTCCAGGATAAAACTGTCCTTCTTCTTCAGGACACCAAATGAAGACAGG AAAAACAGATCCTTCGTGAGCAGCTGCTGCTAATGCAGGATTATCCTCAATCCTTAGGTCTCTT CTAAACCAAACTATAGTCTTTTTGTCCATCTTCATAGTTATTATGATCACAGATGAATCAAAGA TCAAATCAGCTAAAATTCCACACTCTAACCAAGTTGTTCCATGATTTCAGACCTCAACCTCCTC CAGAGAATAGTT
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Genomic sequence |
CGCGGGATTGTCCAAGCGATCAAGCTCGTGGCCATCGGGGATACTCCCAGAGATATACTGCCAG CCAAGGATGTCACATTCCAAATCAGCATCCAAAAGTGTATCCCAGAAATACTTCATTCCCCATT TCCATGGAAGGAGAAGAAACTTCACAGCAAAGCTTGAAACAATCACTCTTATTCTGTTATGCAT CCATCCGGTAGCCCAAAGCTCTCTCATTCCGGCATCCACCAACGGATAACCGGTCCTGCCTTGT CTCCAGGCCTTGAACTTATCAACATCAGCATCCCAAGGGAAAAACCGAAGATGACTCAACAACG ATTGCTCGTGAGTAAACGGGAAGTTGAAACATATATACCGAGAATACTCTCTTAAACCGATTCC CCTAAGAAAAAGATCTGCACTTTCTTCTCCTTCACTGTTCTTATCTCTTGCCCATATAATTTGT TTCATCCGGGCACACTGGAAAACGTGTCTGACGCTTATTTCCCCGAAATGGAGATACGGAGAAA GTAGTGAAGTAGAATTCCCAACAACTTTCTTGCTGTTCTTTGCATAATCTATCAACTGCTTCTC GATGAACTCATTTAGTAACTTATCAGCATTGCTCCATCCTGGAGACCAAGCTCTAGTTAACAAC GCATTGCTCGGTTTCTCGGCCTCATTCTCCAGCCCTAGTTCTTCAATCGAACACGCCCAAATCG CTTCAGCCGCTAACAAAGAAAAAGCCATAAACTTTTACTACCGCTTATGTCCTGAAGAAATCAA AAACGTTTTAGCTTTTAAGTAATACTCTTTAAGGTTTTACCTGCAGTTATTGGCATCAACCGCC AAGGAGGAGGAAGCATAACGGATTCAATCGACATATCTAAGCATTTCTTCCAGTAAGAATTGAA ACTCGTAAAAGGTTTGCCCTTTTCGCAGTATATCTCCCACGGTTCATACAATAGATCTCCATTG TAGCTTTGCACAGAGATCCCACGTTCCACCAGCTTCTCCTTTACGGTATGGTCCCGAACTAACG AAACAGGATCTACAACAAAGAAAAACGTGATCGCATCAACCTCAGTTGCACTTAGACTACACTA ACTTAATAAGAATATATATCCTTTGAATAAGAGATGAAAGAGTATATACCATAGAGGTGGTTAA AGACGACTTTTGTAGCACCGGTAACGCGGATACAATCCAAGATCGCTGAAATCGTGTTGTGGGT TTTGATTAAAGTGAGGTCAGATCCAAGAGCCTTCAAGGATTGAGATAAGTGAGCAAGTGATTGT TTCATCCACCATCTTGAAGCTCTTCCAGGATAAAACTGTCCTTCTTCTTCAGGACACCAAATGA AGACAGGAAAAACAGATCCTTCGTGAGCAGCTGCTGCTAATGCAGGATTATCCTCAATCCTTAG GTCTCTTCTAAACCAAACTATAGTCTTTTTGTCCATCTTCATAGTTATTATGATCACAGATGAA TCAAAGATCAAATCAGCTAAAATTCCACACTCTAACCAAGTTGTTCCATGATTTCAGACCTCAA CCTCCTCCAGAGAATAGTT |