Detail information of BGIOSGA014376_circ_g.8


General Information
CircRNA Name BGIOSGA014376_circ_g.8
ID in PlantcircBase osi_circ_000525
Alias NA
Organism Oryza sativa ssp. indica
Position chr4: 29773361-29774072  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   i-circRNA
Identification method DCC
Parent gene BGIOSGA014376
Parent gene annotation NA
Parent gene strand -
Alternative splicing BGIOSGA014376_circ_g.1 BGIOSGA014376_circ_g.2 BGIOSGA014376_circ_g.3 BGIOSGA014376_circ_g.4 BGIOSGA014376_circ_g.5 BGIOSGA014376_circ_g.6 BGIOSGA014376_circ_g.7 BGIOSGA014376_circ_g.9 BGIOSGA014376_circ_g.10
Support reads NA
Tissues leaf
Exon boundary   NA-NA
Splicing signals   TA-AA
Number of exons covered 0
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   GTATGCCTGCTAGATCATGTTATATAGTACAAGAGTACCAGATGCAACAAGTAAACAATTAGCT
GATGTACAGAAACAGTCTGTGGTTTAAAACATTGAAgaaaccaaacagttgtatagcaaataca
actatactttcaaataaactacagtctagcctgcacaaacgtgcaggaaattcggctagttcct
gttcttag
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GAAACCAAACAGTTGTATAGCAAATACAACTATACTTTCAAATAAACTACAGTCTAGCCTGCAC
AAACGTGCAGGAAATTCGGCTAGTTCCTGTTCTTAGTATACAAAATATAGCATTCAACACTCCA
TATTCACTGCCAACTAGCGATCTCATCCAATCATCTTTGGGCAGGATGGGGTGGGGAACTCATT
CAATTTGGTGCAAACGCTTCGACCTAGTCGACTACCATTTGACATGACCACACGGCAAGGACAA
CCCGCAAGTCACTACAACAGATTTAGCAGGTAAAAGGTTGATCCTACAAAAATGGACGTATAGA
GGAACTCATTCCCTTTATGCCCTATAGAGTGTTCCATGTCTGTGCCTATGAAGCACTAAGTAAT
CTAAACCCAATAAGTGATTAAGACAGAAAGCTCCTAGATATAAGGCAAGTTCCATGCTTCTCTT
GCACCGTTGTTAGCTTTTTGCTTCAGTATTCATCTTTCCGTTATTTTTTCCCAGTTGTGACATT
CATATCATGCCACCCTATTCACTCCTACATTCATTACTTTCTGTTTTAAAGATGTTTACTATGA
GTATTAAGTTTATTTCTGTAAATATACTTGAGCAAAGTATGCCTGCTAGATCATGTTATATAGT
ACAAGAGTACCAGATGCAACAAGTAAACAATTAGCTGATGTACAGAAACAGTCTGTGGTTTAAA
ACATTGAA
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs osa-miR2922
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Guria et al., 2019