Detail information of BGIOSGA014376_circ_g.7


General Information
CircRNA Name BGIOSGA014376_circ_g.7
ID in PlantcircBase osi_circ_005713
Alias 4:29770738|29777536
Organism Oryza sativa ssp. indica
Position chr4: 29770738-29777536  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   ei-circRNA
Identification method find_circ
Parent gene BGIOSGA014376
Parent gene annotation NA
Parent gene strand -
Alternative splicing BGIOSGA014376_circ_g.1 BGIOSGA014376_circ_g.2 BGIOSGA014376_circ_g.3 BGIOSGA014376_circ_g.4 BGIOSGA014376_circ_g.5 BGIOSGA014376_circ_g.6 BGIOSGA014376_circ_g.8 BGIOSGA014376_circ_g.9 BGIOSGA014376_circ_g.10
Support reads NA
Tissues leaf
Exon boundary   Yes-No
Splicing signals   CT-AC
Number of exons covered BGIOSGA014376-TA:12
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   CATCGCCCCAAAGTCCAAGCCGAACCATATAGCCCAAATTCCGTGGTTCTGATGCACCAGTTGC
CGAGCAATAAACAACCCGTGCCTCAGGTAGCTTTTCctatattgtggtgcagaagtttgattag
aacgatgagttctcccaaactgttgtattgcacgatctgcactccaagggagctcaagtgttat
gtgtactc
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs osa-miR2922
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Huang et al., 2021