Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA033301_circ_ag.13 |
ID in PlantcircBase | osi_circ_008631 |
Alias | Chr10:22131609_22136687(MH63RS2), Chr10:22131609_22136687(MH63RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr10: 19254597-19259676 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ag-circRNA |
Identification method | CIRCexplorer2, CIRCexplorer2 |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | BGIOSGA033301_circ_g.1 BGIOSGA033301_circ_ag.1 BGIOSGA033301_circ_g.2 BGIOSGA033301_circ_g.3 BGIOSGA033301_circ_ag.4 BGIOSGA033301_circ_g.5 BGIOSGA033301_circ_ag.6 BGIOSGA033301_circ_g.7 BGIOSGA033301_circ_ag.8 BGIOSGA033301_circ_g.9 BGIOSGA033301_circ_ag.10 BGIOSGA033301_circ_g.11 BGIOSGA033301_circ_g.12 BGIOSGA033301_circ_ag.14 BGIOSGA033301_circ_ag.15 BGIOSGA033301_circ_ag.16 BGIOSGA033301_circ_ag.17 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | NA-NA |
Splicing signals | GT-CA |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |