Plant Circular RNA Database

Detail information of Os04g0609700_circ_g.4

			
						 General Information
					
						CircRNA Name
						Os04g0609700_circ_g.4
					
						ID in PlantcircBase
						osa_circ_025159
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr4: 30895096-30899389  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os04g0609700						
					
						Parent gene annotation
						
							Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os04
t0609700-01);Similar to H0702G05.10 protein. (Os04t0609700-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os04g0609700_circ_g.1 Os04g0609700_circ_g.2 Os04g0609700_circ_g.3 Os04g0609700_circ_g.5 Os04g0609700_circ_g.6 Os04g0609700_circ_g.7 Os04g0609700_circ_g.8 Os04g0609700_circ_g.9 Os04g0609700_circ_igg.1 Os04g0609700_circ_g.2 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os04t0609700-01:14

General Information
CircRNA Name	Os04g0609700_circ_g.4
ID in PlantcircBase	osa_circ_025159
Alias	NA
Organism	Oryza sativa
Position	chr4: 30895096-30899389 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os04g0609700
Parent gene annotation	Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os04 t0609700-01);Similar to H0702G05.10 protein. (Os04t0609700-02)
Parent gene strand	-
Alternative splicing	Os04g0609700_circ_g.1 Os04g0609700_circ_g.2 Os04g0609700_circ_g.3 Os04g0609700_circ_g.5 Os04g0609700_circ_g.6 Os04g0609700_circ_g.7 Os04g0609700_circ_g.8 Os04g0609700_circ_g.9 Os04g0609700_circ_igg.1 Os04g0609700_circ_g.2
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os04t0609700-01:14

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATGACCAGTCATCAGTTAATACCCCAGTCCAAGGTGGTGTCAGACAACCAGGGTGAACATGTCG
AGAACAACCAGAACAATGAAGCAACAGAGTCTTCTCctgcttggacgaagcatcatattcatct
tgccaacctttgttaaccttttctattgatgacactttcctgtacttgcttttcagttctgtta
aaggcatt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1497
Transcript exons: 30895096-30895198,30895375-30895428,30895891-30896009,30
896151-30896228,30896311-30896434,30896504-30896615,3089
6706-30896823,30896911-30896998,30897072-30897167,308977
63-30897869,30897962-30898097,30898177-30898274,30899042
-30899135,30899220-30899389
CTGCTTGGACGAAGCATCATATTCATCTTGCCAACCTTTGTTAACCTTTTCTATTGATGACACT
TTCCTGTACTTGCTTTTCAGTTCTGTTAAAGGCATTTCTCTTAATGCTTCACCAATAGCAGGTC
GAATTATTTTATACATCCCTTCGATTGAGCCTTCAAAAGCAAGTATGAAATGCCTTCCTCCCAT
CCATTCCCTTTTGGACTCGTAAAACCCATCATTAGAAGAACCAGCACCATCCTTTTGCCTCTCA
TCAAGCATTGATTTTGCCGTCTCCCAAGTAACTCCTCGGTCAATGGTGAAAGTAAAAAGTACAG
TTGACGCGCCTGACAAGCTATCAATGTGAACGGTCTTGGGTGATTCTTTCATTTCAACATTTTT
AGCTTTTATATCAACGATTCCAGAATCCAGCTGCCCTTCTATTCGTGCATTGTGCAAAACAACA
TCAAGTATACTTGTAAAAAGATCAAATAACCTATTCTGGATTTTCGGAGCCAGTCCCAAAAGGC
GGTTAAGAAAACGAGCAACATCATGCATATCTGAGTCAACAATCCGACCAGAAAGCTTCCCAGC
AACTTTTCCATTGCACACTACAGCATCCCTGATAATCCCAACTGATACTAGAGCAGCTTTTGCT
TCAGCAATGAACTCTTGGATGCTAGATTGATTGTCAGAACACCCCGGAGGAACAACTGGAAAAG
AATCCTGCTCCATTATTCCTCTATACATGATGGTTAGGGCTTTTTTCCCATAATTGCTGTCGTA
GTTAAAAGCACTCAGAGAAGGTCCAGCCCTGCGATCTCCTTGCGTTAAAGCTCCTAGAGACTCC
AGTCTTTTTGCTACGATTGATGCAAATCGCTTTTCACCACCAAGATTTGTAAAGAGAAGCCTAT
ATTGTGGTGCAGAAGTTTGATTAGAACGATGAGTTCTCCCAAACTGTTGTATTGCACGATCTGC
ACTCCAAGGGAGCTCAAGTGTTATGTGTACTCTTCTTCTCTGGTTTTTTGCCCTTCTATCAGCA
TGCAGCGAAACGCCAGCTGATCCTGCTTCAGATATAATAGATATTAGTTTTTTGCCATCCATGA
ACTGCTGTTTTTCATGCATATTGATCATCTCCATCGACACTTCTTTCGCATTCCGCGCCTGATA
AACAACGCCTTTTCCGTCAGAAGCTCTTATTAGCATACCACGCCGTCCAGTTATTTCTGCAACA
TTGTCAGGGCCTCCTAGCTGATCAATGATGTCATCAAGAGGATTGTTAGGGAGATCCAAAGAAC
GTATCATATCCAAAATCTTCTTTTTTTTCTCTACTGCAGCATCATACCTCTGTGAAAAATCAGC
TACATGAGCATCTTGTTCATTTTCCTCTCCTTCTAACTTCTTGCATGTGTAGCATGACCAGTCA
TCAGTTAATACCCCAGTCCAAGGTGGTGTCAGACAACCAGGGTGAACATGTCGAGAACAACCAG
AACAATGAAGCAACAGAGTCTTCTC
						
					

						Genomic sequence
						
							CTGCTTGGACGAAGCATCATATTCATCTTGCCAACCTTTGTTAACCTTTTCTATTGATGACACT
TTCCTGTACTTGCTTTTCAGTTCTGTTAAAGGCATTTCTCTGCAATAGAAACATGGAGTGTAAC
CAAAAAAAAAATTAAATAGCATTTTTTATATAAACATATCGTACCTGCTAGGCTACTAGACATG
GTGATTAAACATGAAGCTGTATGCAGTATAAATTTTTCTTACAATAGGTTACACCAGAAAAAAT
ATATAATAATGAACTGCAGATACCTTAATGCTTCACCAATAGCAGGTCGAATTATTTTATACAT
CCCTTCGATTGAGCTGGTTCACAAACAAAATGGAACAAAGAGTCAGGTCATAGCATCACATTTC
AAATCAACTATTTTTGTTGACAAAAGGAAAAACTAGTACTAGCACATTGTATAGTTTCCACTGC
TTTATAGAAATACGAAAATGCTCCTCAGTTGCTAGCAAATAAAGATTTTTTTTCATTTATCTAA
TAAGCGTAGTTTGCAGTTCTCAACTAAATAATGAGGTGCCTTTTCATTTTATTTATTTATTTTG
CTAATCACATTTGGCCAGAATTCATTCAGCGTTAGATTGATTAATATTCCAATTCAGTCTTTTT
CCTCGATACACACGGTATCAATTGCATGGTAAATTTCTACTACATTATTTATCTATTCCTCTAT
TTGAATAAGGGTTTTCAGTTTTTAGCAATGCTAAGTTGCTAACAGATGGCTGATAAGAACTAAA
GAATAAATAAATGATTATCCAACATACCCTTCAAAAGCAAGTATGAAATGCCTTCCTCCCATCC
ATTCCCTTTTGGACTCGTAAAACCCATCATTAGAAGAACCAGCACCATCCTTTTGCCTCTCATC
AAGCATTGATTTTGCCGTCTTTACACGTTCACAAAAGCAATTGAGCAAAAACCATAGAAGTTGC
AGTTTTACAAGAAACATGGACTGTACTTTTAAATACAGCTACAACCATGTCTCTCAAGGAAAAA
CAGAATTCGACTACCAAAGTTGTATGTTTACCTCCCAAGTAACTCCTCGGTCAATGGTGAAAGT
AAAAAGTACAGTTGACGCGCCTGACAAGCTATCAATGTGAACGGTCTGCAAGGAGAAAATGCAT
TAAGAATCTACAGATTAGAAGCACAGAGCAGACAAAGCAAAAAGTTTTCTAAAAGAGCATTGCC
TTGGGTGATTCTTTCATTTCAACATTTTTAGCTTTTATATCAACGATTCCAGAATCCAGCTGCC
CTTCTATTCGTGCATTGTGCAAAACAACATCAAGTATACTTGTAAAAAGATCAAATAACCTGTT
ACATAGAGAATGTGTAAGTATAGTCCAACCATCTCAAGTTACAGGATACTGCATGGCATCTCAC
CTATTCTGGATTTTCGGAGCCAGTCCCAAAAGGCGGTTAAGAAAACGAGCAACATCATGCATAT
CTGAGTCAACAATCCGACCAGAAAGCTTCCCAGCAACTTTTCCATTGCCTGAGGAAAAACGTTA
AATGAGTCCAACACAGTCACAAACACTAAGGTATGGAAGAAAGAAAGTGTCTAATTGTTTCTGG
GTAAACTTACACACTACAGCATCCCTGATAATCCCAACTGATACTAGAGCAGCTTTTGCTTCAG
CAATGAACTCTTGGATGCTAGATTGATTGTCAGAACACCCCGGAGGAACAACTGGAAAAGAATC
CTGGTCATCTTGAAAGTAACTCTTAGAATGGTGAATAAAGCATGAAAAGGAAAACATATTCAAA
AACTATAGTGTAATTATATAAACCTGCTCCATTATTCCTCTATACATGATGGTTAGGGCTTTTT
TCCCATAATTGCTGTCGTAGTTAAAAGCACTCAGAGAAGGTCCAGCCCTGCAGAAGTAGAAGTC
AGTTAAGATATGATTTAGCTGATGTCGATACAAAATTGGTTGAAATCAGCAAAAACCTGCGATC
TCCTTGCGTTAAAGCTCCTAGAGACTCCAGTCTTTTTGCTACGATTGATGCAAATCGCTTTTCA
CCACCAAGATTTGTAAAGAGAAGCCTGCAATTGAGATTCCAAATTTATTTTTAAGATATACATC
TATATAGCAAATGTACATCCATGCCATGTGAACATGTGAAATTAATAGTAAAATAGCGAGTCTG
GATAACCAATATAAAGTAGAATGACTATTATTTTTCCATCCACATCAAATAACCACTTTGCCTC
ATTGTCTCAGCATTTAAGTATTACATGAATATATTGTGTACACAGCACTGGTCCCCAATTCCCA
CCTTCATGCTAGATATTTTTAAAGACTACATAAATAAATTCATGAGACTTCAAATTTCTTTCGT
CAGACAGACACGTCACTAATTGTTACAGGTTCCAGCAGACAGCCATCACATATTATAGCTACAT
ACAATACACTGAAACCAGCAATTTTATCTATATATGTTTGATTTGTGCTTACTTCACTGCTTGA
CAAATTTCAGTCTGCCCTAGCTCTTCATTCATGACTCGTATACAGTACCAGAAGACAATATAAC
GGAAATCCCTATTCTAGCAATTTGTTTTGCTGAATGGCAATACGGACAATCGAAACACAGACCT
ACAAGAAGCTAGAGATGGCTCATATGAGAAATATAAAGCATACCTATATTGTGGTGCAGAAGTT
TGATTAGAACGATGAGTTCTCCCAAACTGTTGTATTGCACGATCTGCACTCCAAGGGAGCTCAA
GTGTTATGTGTACTCTTCTTCTCTGCAAAGTTCATTAAGAAGTTTCATCAAAATTACAACAGAC
CAACCTCTGGTGTATTTGAAACATGTGGATAAAATGAAGAATCATAAAACCTGGTTTTTTGCCC
TTCTATCAGCATGCAGCGAAACGCCAGCTGATCCTGCTTCAGATATAATAGATATTAGTTTTTT
GCCATCCATGAACTGCTGTTTTTCATGCATATTGATCATCTCCATCGACACTTCTTTCCTACAT
ACAGAAAATGCACACGTATGGGATTAGTTGAACCAGAGAAACATAATGCAAAATCACAAGTAAG
CTATCTCACGCATTCCGCGCCTGATAAACAACGCCTTTTCCGTCAGAAGCTCTTATTAGCATAC
CACGCCGTCCAGTTATTTCTGCAACATTGTCAGGGCCTCCTAGCTGCAAAATCCAAATAAAATG
GAAAAATATTAATTATATGTATGGTCCAATAATACTAGAACGAGTTAAAATTAAGATAGGGAAA
AAGATTGTAAAATAATTCAACACAAATTAAACACTGATAAACATATGTCAGGACAATGATTACA
AGCTCATTGCATAATCTTCAGCCAAAATGGGTCTGAAAATGGGAGAACTAACTAATAAACAGGG
ATTGAATATCTATGCAGGAACAATTTAGTTGAGATATGACAGTGGTGCTTAATTCACAAGAGCT
TACTCAAGAAATAAACATATAATTTGACATATCTGACCACCCTTTCTCCTGCTCCAAAATGCAA
CATCATTAACCTACACCTTATTGTGATAATCATCTAACAGACATCCAGAAGATAAGAAAATGGA
AGAGATGTCATGTATATATGAGTTAATGGGTAACAACTCCTAGCTAGCTGCATAAGAATCTTTG
TAATATCTTGATGTCCAAATTTCTTCTACAGCCCAGCCCTGCTGAGCAGGCCTATGCAAGTCTA
GCAGTTCACTTGGATTTGCATCCCAACTTCAGCAAAAAGGATTAGCCCAAAATTGTAATGGTTG
GTCCTCAAACATAATATGCTAGTACTACAGTACTACCACTACTCTGAACTTTGAAATCTGCCCC
TTTCACATCAGTTAACTGTGCAAACAGATGTCAATGCAAGCTCAAAGTTAAAAAATAACCACAG
ATTCAATTATCAACATTTCCAGGTGATGTAAGCCAATATTACCTGATCAATGATGTCATCAAGA
GGATTGTTAGGGAGATCCAAAGAACGTATCATATCCAAAATCTTCTTTTTTTTCTCTACTGCAG
CATCATACCTGACAGCAAGGCACAGGACAAGTATTTATATAATTGGGTGTGGGCATTTTATGGG
GATCTTGATTTGTCAAACGCACACGTACCTCTGTGAAAAATCAGCTACATGAGCATCTTGTTCA
TTTTCCTCTCCTTCTAACTTCTTGCATGTGTAGCATGACCAGTCATCAGTTAATACCCCAGTCC
AAGGTGGTGTCAGACAACCAGGGTGAACATGTCGAGAACAACCAGAACAATGAAGCAACAGAGT
CTTCTC
						
					

			
		

Sequences
Splice junction sequence	ATGACCAGTCATCAGTTAATACCCCAGTCCAAGGTGGTGTCAGACAACCAGGGTGAACATGTCG AGAACAACCAGAACAATGAAGCAACAGAGTCTTCTCctgcttggacgaagcatcatattcatct tgccaacctttgttaaccttttctattgatgacactttcctgtacttgcttttcagttctgtta aaggcatt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1497 Transcript exons: 30895096-30895198,30895375-30895428,30895891-30896009,30 896151-30896228,30896311-30896434,30896504-30896615,3089 6706-30896823,30896911-30896998,30897072-30897167,308977 63-30897869,30897962-30898097,30898177-30898274,30899042 -30899135,30899220-30899389 CTGCTTGGACGAAGCATCATATTCATCTTGCCAACCTTTGTTAACCTTTTCTATTGATGACACT TTCCTGTACTTGCTTTTCAGTTCTGTTAAAGGCATTTCTCTTAATGCTTCACCAATAGCAGGTC GAATTATTTTATACATCCCTTCGATTGAGCCTTCAAAAGCAAGTATGAAATGCCTTCCTCCCAT CCATTCCCTTTTGGACTCGTAAAACCCATCATTAGAAGAACCAGCACCATCCTTTTGCCTCTCA TCAAGCATTGATTTTGCCGTCTCCCAAGTAACTCCTCGGTCAATGGTGAAAGTAAAAAGTACAG TTGACGCGCCTGACAAGCTATCAATGTGAACGGTCTTGGGTGATTCTTTCATTTCAACATTTTT AGCTTTTATATCAACGATTCCAGAATCCAGCTGCCCTTCTATTCGTGCATTGTGCAAAACAACA TCAAGTATACTTGTAAAAAGATCAAATAACCTATTCTGGATTTTCGGAGCCAGTCCCAAAAGGC GGTTAAGAAAACGAGCAACATCATGCATATCTGAGTCAACAATCCGACCAGAAAGCTTCCCAGC AACTTTTCCATTGCACACTACAGCATCCCTGATAATCCCAACTGATACTAGAGCAGCTTTTGCT TCAGCAATGAACTCTTGGATGCTAGATTGATTGTCAGAACACCCCGGAGGAACAACTGGAAAAG AATCCTGCTCCATTATTCCTCTATACATGATGGTTAGGGCTTTTTTCCCATAATTGCTGTCGTA GTTAAAAGCACTCAGAGAAGGTCCAGCCCTGCGATCTCCTTGCGTTAAAGCTCCTAGAGACTCC AGTCTTTTTGCTACGATTGATGCAAATCGCTTTTCACCACCAAGATTTGTAAAGAGAAGCCTAT ATTGTGGTGCAGAAGTTTGATTAGAACGATGAGTTCTCCCAAACTGTTGTATTGCACGATCTGC ACTCCAAGGGAGCTCAAGTGTTATGTGTACTCTTCTTCTCTGGTTTTTTGCCCTTCTATCAGCA TGCAGCGAAACGCCAGCTGATCCTGCTTCAGATATAATAGATATTAGTTTTTTGCCATCCATGA ACTGCTGTTTTTCATGCATATTGATCATCTCCATCGACACTTCTTTCGCATTCCGCGCCTGATA AACAACGCCTTTTCCGTCAGAAGCTCTTATTAGCATACCACGCCGTCCAGTTATTTCTGCAACA TTGTCAGGGCCTCCTAGCTGATCAATGATGTCATCAAGAGGATTGTTAGGGAGATCCAAAGAAC GTATCATATCCAAAATCTTCTTTTTTTTCTCTACTGCAGCATCATACCTCTGTGAAAAATCAGC TACATGAGCATCTTGTTCATTTTCCTCTCCTTCTAACTTCTTGCATGTGTAGCATGACCAGTCA TCAGTTAATACCCCAGTCCAAGGTGGTGTCAGACAACCAGGGTGAACATGTCGAGAACAACCAG AACAATGAAGCAACAGAGTCTTCTC
Genomic sequence	CTGCTTGGACGAAGCATCATATTCATCTTGCCAACCTTTGTTAACCTTTTCTATTGATGACACT TTCCTGTACTTGCTTTTCAGTTCTGTTAAAGGCATTTCTCTGCAATAGAAACATGGAGTGTAAC CAAAAAAAAAATTAAATAGCATTTTTTATATAAACATATCGTACCTGCTAGGCTACTAGACATG GTGATTAAACATGAAGCTGTATGCAGTATAAATTTTTCTTACAATAGGTTACACCAGAAAAAAT ATATAATAATGAACTGCAGATACCTTAATGCTTCACCAATAGCAGGTCGAATTATTTTATACAT CCCTTCGATTGAGCTGGTTCACAAACAAAATGGAACAAAGAGTCAGGTCATAGCATCACATTTC AAATCAACTATTTTTGTTGACAAAAGGAAAAACTAGTACTAGCACATTGTATAGTTTCCACTGC TTTATAGAAATACGAAAATGCTCCTCAGTTGCTAGCAAATAAAGATTTTTTTTCATTTATCTAA TAAGCGTAGTTTGCAGTTCTCAACTAAATAATGAGGTGCCTTTTCATTTTATTTATTTATTTTG CTAATCACATTTGGCCAGAATTCATTCAGCGTTAGATTGATTAATATTCCAATTCAGTCTTTTT CCTCGATACACACGGTATCAATTGCATGGTAAATTTCTACTACATTATTTATCTATTCCTCTAT TTGAATAAGGGTTTTCAGTTTTTAGCAATGCTAAGTTGCTAACAGATGGCTGATAAGAACTAAA GAATAAATAAATGATTATCCAACATACCCTTCAAAAGCAAGTATGAAATGCCTTCCTCCCATCC ATTCCCTTTTGGACTCGTAAAACCCATCATTAGAAGAACCAGCACCATCCTTTTGCCTCTCATC AAGCATTGATTTTGCCGTCTTTACACGTTCACAAAAGCAATTGAGCAAAAACCATAGAAGTTGC AGTTTTACAAGAAACATGGACTGTACTTTTAAATACAGCTACAACCATGTCTCTCAAGGAAAAA CAGAATTCGACTACCAAAGTTGTATGTTTACCTCCCAAGTAACTCCTCGGTCAATGGTGAAAGT AAAAAGTACAGTTGACGCGCCTGACAAGCTATCAATGTGAACGGTCTGCAAGGAGAAAATGCAT TAAGAATCTACAGATTAGAAGCACAGAGCAGACAAAGCAAAAAGTTTTCTAAAAGAGCATTGCC TTGGGTGATTCTTTCATTTCAACATTTTTAGCTTTTATATCAACGATTCCAGAATCCAGCTGCC CTTCTATTCGTGCATTGTGCAAAACAACATCAAGTATACTTGTAAAAAGATCAAATAACCTGTT ACATAGAGAATGTGTAAGTATAGTCCAACCATCTCAAGTTACAGGATACTGCATGGCATCTCAC CTATTCTGGATTTTCGGAGCCAGTCCCAAAAGGCGGTTAAGAAAACGAGCAACATCATGCATAT CTGAGTCAACAATCCGACCAGAAAGCTTCCCAGCAACTTTTCCATTGCCTGAGGAAAAACGTTA AATGAGTCCAACACAGTCACAAACACTAAGGTATGGAAGAAAGAAAGTGTCTAATTGTTTCTGG GTAAACTTACACACTACAGCATCCCTGATAATCCCAACTGATACTAGAGCAGCTTTTGCTTCAG CAATGAACTCTTGGATGCTAGATTGATTGTCAGAACACCCCGGAGGAACAACTGGAAAAGAATC CTGGTCATCTTGAAAGTAACTCTTAGAATGGTGAATAAAGCATGAAAAGGAAAACATATTCAAA AACTATAGTGTAATTATATAAACCTGCTCCATTATTCCTCTATACATGATGGTTAGGGCTTTTT TCCCATAATTGCTGTCGTAGTTAAAAGCACTCAGAGAAGGTCCAGCCCTGCAGAAGTAGAAGTC AGTTAAGATATGATTTAGCTGATGTCGATACAAAATTGGTTGAAATCAGCAAAAACCTGCGATC TCCTTGCGTTAAAGCTCCTAGAGACTCCAGTCTTTTTGCTACGATTGATGCAAATCGCTTTTCA CCACCAAGATTTGTAAAGAGAAGCCTGCAATTGAGATTCCAAATTTATTTTTAAGATATACATC TATATAGCAAATGTACATCCATGCCATGTGAACATGTGAAATTAATAGTAAAATAGCGAGTCTG GATAACCAATATAAAGTAGAATGACTATTATTTTTCCATCCACATCAAATAACCACTTTGCCTC ATTGTCTCAGCATTTAAGTATTACATGAATATATTGTGTACACAGCACTGGTCCCCAATTCCCA CCTTCATGCTAGATATTTTTAAAGACTACATAAATAAATTCATGAGACTTCAAATTTCTTTCGT CAGACAGACACGTCACTAATTGTTACAGGTTCCAGCAGACAGCCATCACATATTATAGCTACAT ACAATACACTGAAACCAGCAATTTTATCTATATATGTTTGATTTGTGCTTACTTCACTGCTTGA CAAATTTCAGTCTGCCCTAGCTCTTCATTCATGACTCGTATACAGTACCAGAAGACAATATAAC GGAAATCCCTATTCTAGCAATTTGTTTTGCTGAATGGCAATACGGACAATCGAAACACAGACCT ACAAGAAGCTAGAGATGGCTCATATGAGAAATATAAAGCATACCTATATTGTGGTGCAGAAGTT TGATTAGAACGATGAGTTCTCCCAAACTGTTGTATTGCACGATCTGCACTCCAAGGGAGCTCAA GTGTTATGTGTACTCTTCTTCTCTGCAAAGTTCATTAAGAAGTTTCATCAAAATTACAACAGAC CAACCTCTGGTGTATTTGAAACATGTGGATAAAATGAAGAATCATAAAACCTGGTTTTTTGCCC TTCTATCAGCATGCAGCGAAACGCCAGCTGATCCTGCTTCAGATATAATAGATATTAGTTTTTT GCCATCCATGAACTGCTGTTTTTCATGCATATTGATCATCTCCATCGACACTTCTTTCCTACAT ACAGAAAATGCACACGTATGGGATTAGTTGAACCAGAGAAACATAATGCAAAATCACAAGTAAG CTATCTCACGCATTCCGCGCCTGATAAACAACGCCTTTTCCGTCAGAAGCTCTTATTAGCATAC CACGCCGTCCAGTTATTTCTGCAACATTGTCAGGGCCTCCTAGCTGCAAAATCCAAATAAAATG GAAAAATATTAATTATATGTATGGTCCAATAATACTAGAACGAGTTAAAATTAAGATAGGGAAA AAGATTGTAAAATAATTCAACACAAATTAAACACTGATAAACATATGTCAGGACAATGATTACA AGCTCATTGCATAATCTTCAGCCAAAATGGGTCTGAAAATGGGAGAACTAACTAATAAACAGGG ATTGAATATCTATGCAGGAACAATTTAGTTGAGATATGACAGTGGTGCTTAATTCACAAGAGCT TACTCAAGAAATAAACATATAATTTGACATATCTGACCACCCTTTCTCCTGCTCCAAAATGCAA CATCATTAACCTACACCTTATTGTGATAATCATCTAACAGACATCCAGAAGATAAGAAAATGGA AGAGATGTCATGTATATATGAGTTAATGGGTAACAACTCCTAGCTAGCTGCATAAGAATCTTTG TAATATCTTGATGTCCAAATTTCTTCTACAGCCCAGCCCTGCTGAGCAGGCCTATGCAAGTCTA GCAGTTCACTTGGATTTGCATCCCAACTTCAGCAAAAAGGATTAGCCCAAAATTGTAATGGTTG GTCCTCAAACATAATATGCTAGTACTACAGTACTACCACTACTCTGAACTTTGAAATCTGCCCC TTTCACATCAGTTAACTGTGCAAACAGATGTCAATGCAAGCTCAAAGTTAAAAAATAACCACAG ATTCAATTATCAACATTTCCAGGTGATGTAAGCCAATATTACCTGATCAATGATGTCATCAAGA GGATTGTTAGGGAGATCCAAAGAACGTATCATATCCAAAATCTTCTTTTTTTTCTCTACTGCAG CATCATACCTGACAGCAAGGCACAGGACAAGTATTTATATAATTGGGTGTGGGCATTTTATGGG GATCTTGATTTGTCAAACGCACACGTACCTCTGTGAAAAATCAGCTACATGAGCATCTTGTTCA TTTTCCTCTCCTTCTAACTTCTTGCATGTGTAGCATGACCAGTCATCAGTTAATACCCCAGTCC AAGGTGGTGTCAGACAACCAGGGTGAACATGTCGAGAACAACCAGAACAATGAAGCAACAGAGT CTTCTC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.219181792

Conservation Information
Conserved circRNAs	NA
PMCS	0.219181792

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							30899349-30895149(+)
30899282-30895136(+)
30899097-30895098(-)
30895123-30899331(-)
						
					

						Potential amino acid sequence
						
							MSRTTRTMKQQSLLLLGRSIIFILPTFVNLFY*(+)
MCSMTSHQLIPQSKVVSDNQGEHVENNQNNEATESSPAWTKHHIHLANLC*(+)
MIRSLDLPNNPLDDIIDQLGGPDNVAEITGRRGMLIRASDGKGVVYQARNAKEVSMEMINMHEK
QQFMDGKKLISIISEAGSAGVSLHADRRAKNQRRRVHITLELPWSADRAIQQFGRTHRSNQTSA
PQYRLLFTNLGGEKRFASIVAKRLESLGALTQGDRRAGPSLSAFNYDSNYGKKALTIMYRGIME
QDSFPVVPPGCSDNQSSIQEFIAEAKAALVSVGIIRDAVVCNGKVAGKLSGRIVDSDMHDVARF
LNRLLGLAPKIQNRLFDLFTSILDVVLHNARIEGQLDSGIVDIKAKNVEMKESPKTVHIDSLSG
ASTVLFTFTIDRGVTWETAKSMLDERQKDGAGSSNDGFYESKREWMGGRHFILAFEGSIEGMYK
IIRPAIGEALREMPLTELKSKYRKVSSIEKVNKGWQDEYDASSKQEKTLLLHCSGCSRHVHPGC
LTPPWTGVLTDDWSCYTCKKLEGEENEQDAHVADFSQRYDAAVEKKKKILDMIRSLDLPNNPLD
DIIDQLGGPDNVAEITGRRGMLIRASDGKGVVYQARNAKEVSMEMINMHEKQQFMDGKKLISII
SEAGSAGVSLHADRRAKNQRRRVHITLELPWSADRAIQQFGRTHRSNQTSAPQYRLLFTNLGGE
KRFASIVAKRLESLGALTQGDRRAGPSLSAFNYDSNYGKKALTIMYRGIMEQDSFPVVPPGCSD
NQSSIQEFIAEAKAALVSVGIIRDAVVCNGKVAGKLSGRIVDSDMHDVARFLNRLLGLAPKIQN
RLFDLFTSILDVVLHNARIEGQLDSGIVDIKAKNVEMKESPKTVHIDSLSGASTVLFTFTIDRG
VTWETAKSMLDERQKDGAGSSNDGFYESKREWMGGRHFILAFEGSIEGMYKIIRPAIGEALREM
PLTELKSKYRKVSSIEKVNKGWQDEYDASSKQEKTLLLHCSGCSRHVHPGCLTPPWTGVLTDDW
SCYTCKKLEGEENEQDAHVADFSQRYDAAVEKKKKILDMIRSLDLPNNPLDDIIDQLGGPDNVA
EITGRRGMLIRASDGKGVVYQARNAKEVSMEMINMHEKQQFMDGKKLISIISEAGSAGVSLHAD
RRAKNQRRRVHITLELPWSADRAIQQFGRTHRSNQTSAPQYRLLFTNLGGEKRFASIVAKRLES
LGALTQGDRRAGPSLSAFNYDSNYGKKALTIMYRGIMEQDSFPVVPPGCSDNQSSIQEFIAEAK
AALVSVGIIRDAVVCNGKVAGKLSGRIVDSDMHDVARFLNRLLGLAPKIQNRLFDLFTSILDVV
LHNARIEGQLDSGIVDIKAKNVEMKESPKTVHIDSLSGASTVLFTFTIDRGVTWETAKSMLDER
QKDGAGSSNDGFYESKREWMGGRHFILAFEGSIEGMYKIIRPAIGEALREMPLTELKSKYRKVS
SIEKVNKGWQDEYDASSKQEKTLLLHCSGCSRHVHPGCLTPPWTGVLTDDWSCYTCKKLEGEEN
EQDAHVADFSQRYDAAVEKKKKILDMIRSLDLPNNPLDDIIDQLGGPDNVAEITGRRGMLIRAS
DGKGVVYQARNAKEVSMEMINMHEKQQFMDGKKLISIISEAGSAGVSLHADRRAKNQRRRVHIT
LELPWSADRAIQQFGRTHRSNQTSAPQYRLLFTNLGGEKRFASIVAKRLESLGALTQGDRRAGP
SLSAFNYDSNYGKKALTIMYRGIMEQDSFPVVPPGCSDNQSSIQEFIAEAKAALVSVGIIRDAV
VCNGKVAGKLSGRIVDSDMHDVARFLNRLLGLAPKIQNRLFDLFTSILDVVLHNARIEGQLDSG
IVDIKAKNVEMKESPKTVHIDSLSGASTVLFTFTIDRGVTWETAKSMLDERQKDGAGSSNDGFY
ESKREWMGGRHFILAFEGSIEGMYKIIRPAIGEALREMPLTELKSKYRKVSSIEKVNKGWQDEY
DASSKQ(-)
MNMMLRPSRRRLCCFIVLVVLDMFTLVV*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	30899349-30895149(+) 30899282-30895136(+) 30899097-30895098(-) 30895123-30899331(-)
Potential amino acid sequence	MSRTTRTMKQQSLLLLGRSIIFILPTFVNLFY(+) MCSMTSHQLIPQSKVVSDNQGEHVENNQNNEATESSPAWTKHHIHLANLC(+) MIRSLDLPNNPLDDIIDQLGGPDNVAEITGRRGMLIRASDGKGVVYQARNAKEVSMEMINMHEK QQFMDGKKLISIISEAGSAGVSLHADRRAKNQRRRVHITLELPWSADRAIQQFGRTHRSNQTSA PQYRLLFTNLGGEKRFASIVAKRLESLGALTQGDRRAGPSLSAFNYDSNYGKKALTIMYRGIME QDSFPVVPPGCSDNQSSIQEFIAEAKAALVSVGIIRDAVVCNGKVAGKLSGRIVDSDMHDVARF LNRLLGLAPKIQNRLFDLFTSILDVVLHNARIEGQLDSGIVDIKAKNVEMKESPKTVHIDSLSG ASTVLFTFTIDRGVTWETAKSMLDERQKDGAGSSNDGFYESKREWMGGRHFILAFEGSIEGMYK IIRPAIGEALREMPLTELKSKYRKVSSIEKVNKGWQDEYDASSKQEKTLLLHCSGCSRHVHPGC LTPPWTGVLTDDWSCYTCKKLEGEENEQDAHVADFSQRYDAAVEKKKKILDMIRSLDLPNNPLD DIIDQLGGPDNVAEITGRRGMLIRASDGKGVVYQARNAKEVSMEMINMHEKQQFMDGKKLISII SEAGSAGVSLHADRRAKNQRRRVHITLELPWSADRAIQQFGRTHRSNQTSAPQYRLLFTNLGGE KRFASIVAKRLESLGALTQGDRRAGPSLSAFNYDSNYGKKALTIMYRGIMEQDSFPVVPPGCSD NQSSIQEFIAEAKAALVSVGIIRDAVVCNGKVAGKLSGRIVDSDMHDVARFLNRLLGLAPKIQN RLFDLFTSILDVVLHNARIEGQLDSGIVDIKAKNVEMKESPKTVHIDSLSGASTVLFTFTIDRG VTWETAKSMLDERQKDGAGSSNDGFYESKREWMGGRHFILAFEGSIEGMYKIIRPAIGEALREM PLTELKSKYRKVSSIEKVNKGWQDEYDASSKQEKTLLLHCSGCSRHVHPGCLTPPWTGVLTDDW SCYTCKKLEGEENEQDAHVADFSQRYDAAVEKKKKILDMIRSLDLPNNPLDDIIDQLGGPDNVA EITGRRGMLIRASDGKGVVYQARNAKEVSMEMINMHEKQQFMDGKKLISIISEAGSAGVSLHAD RRAKNQRRRVHITLELPWSADRAIQQFGRTHRSNQTSAPQYRLLFTNLGGEKRFASIVAKRLES LGALTQGDRRAGPSLSAFNYDSNYGKKALTIMYRGIMEQDSFPVVPPGCSDNQSSIQEFIAEAK AALVSVGIIRDAVVCNGKVAGKLSGRIVDSDMHDVARFLNRLLGLAPKIQNRLFDLFTSILDVV LHNARIEGQLDSGIVDIKAKNVEMKESPKTVHIDSLSGASTVLFTFTIDRGVTWETAKSMLDER QKDGAGSSNDGFYESKREWMGGRHFILAFEGSIEGMYKIIRPAIGEALREMPLTELKSKYRKVS SIEKVNKGWQDEYDASSKQEKTLLLHCSGCSRHVHPGCLTPPWTGVLTDDWSCYTCKKLEGEEN EQDAHVADFSQRYDAAVEKKKKILDMIRSLDLPNNPLDDIIDQLGGPDNVAEITGRRGMLIRAS DGKGVVYQARNAKEVSMEMINMHEKQQFMDGKKLISIISEAGSAGVSLHADRRAKNQRRRVHIT LELPWSADRAIQQFGRTHRSNQTSAPQYRLLFTNLGGEKRFASIVAKRLESLGALTQGDRRAGP SLSAFNYDSNYGKKALTIMYRGIMEQDSFPVVPPGCSDNQSSIQEFIAEAKAALVSVGIIRDAV VCNGKVAGKLSGRIVDSDMHDVARFLNRLLGLAPKIQNRLFDLFTSILDVVLHNARIEGQLDSG IVDIKAKNVEMKESPKTVHIDSLSGASTVLFTFTIDRGVTWETAKSMLDERQKDGAGSSNDGFY ESKREWMGGRHFILAFEGSIEGMYKIIRPAIGEALREMPLTELKSKYRKVSSIEKVNKGWQDEY DASSKQ(-) MNMMLRPSRRRLCCFIVLVVLDMFTLVV*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os04g0609700_circ_g.4

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