Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA014529_circ_g.13 |
ID in PlantcircBase | osi_circ_014686 |
Alias | Chr04:29197569_29198268(MH63RS2), Chr04:29197569_29198268(MH63RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr4: 27433284-27433983 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ie-circRNA |
Identification method | CIRI2, CIRCexplorer2, CIRI2, CIRCexplorer2 |
Parent gene | BGIOSGA014529 |
Parent gene annotation | NA |
Parent gene strand | - |
Alternative splicing | BGIOSGA014529_circ_g.1 BGIOSGA014529_circ_g.2 BGIOSGA014529_circ_g.3 BGIOSGA014529_circ_g.4 BGIOSGA014529_circ_g.5 BGIOSGA014529_circ_g.6 BGIOSGA014529_circ_g.7 BGIOSGA014529_circ_g.8 BGIOSGA014529_circ_g.9 BGIOSGA014529_circ_g.10 BGIOSGA014529_circ_g.11 BGIOSGA014529_circ_g.12 BGIOSGA014529_circ_g.14 BGIOSGA014529_circ_g.15 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | No-No |
Splicing signals | CT-AA |
Number of exons covered | BGIOSGA014529-TA:2 |
Conservation Information | |
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Conserved circRNAs | osa_circ_024939 |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |