Plant Circular RNA Database

Detail information of AT1G03780_circ_g.16

			
						 General Information
					
						CircRNA Name
						AT1G03780_circ_g.16
					
						ID in PlantcircBase
						ath_circ_000471
					
						Alias
						NA
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr1: 949076-951211  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, KNIFE, PcircRNA_finder, CIRI-full
					
						Parent gene
						
							AT1G03780						
					
						Parent gene annotation
						
							Protein TPX2
							
						Parent gene strand
						-
					
						Alternative splicing
						
							AT1G03780_circ_g.1 AT1G03780_circ_g.2 AT1G03780_circ_g.3 AT1G03780_circ_g.4 AT1G03780_circ_g.5 AT1G03780_circ_g.6 AT1G03780_circ_g.7 AT1G03780_circ_g.8 AT1G03780_circ_g.9 AT1G03780_circ_g.10 AT1G03780_circ_g.11 AT1G03780_circ_g.12 AT1G03780_circ_g.13 AT1G03780_circ_g.14 AT1G03780_circ_g.15 AT1G03780_circ_g.17 AT1G03780_circ_g.18 AT1G03780_circ_g.19 AT1G03780_circ_g.20 AT1G03780_circ_g.21 AT1G03780_circ_g.22 AT1G03780_circ_g.23 AT1G03780_circ_g.24 AT1G03780_circ_g.25 AT1G03780_circ_g.26 AT1G03780_circ_g.27 AT1G03780_circ_g.28 AT1G03780_circ_g.29 AT1G03780_circ_g.30 AT1G03780_circ_g.31 AT1G03780_circ_g.32 AT1G03780_circ_g.33 AT1G03780_circ_g.34 						
					
						Support reads
						2
					
						Tissues
						inflorescences, whole_plant
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT1G03780.1:9
AT1G03780.2:10
AT1G03780.3:10

General Information
CircRNA Name	AT1G03780_circ_g.16
ID in PlantcircBase	ath_circ_000471
Alias	NA
Organism	Arabidpsis thaliana
Position	chr1: 949076-951211 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	CIRCexplorer, KNIFE, PcircRNA_finder, CIRI-full
Parent gene	AT1G03780
Parent gene annotation	Protein TPX2
Parent gene strand	-
Alternative splicing	AT1G03780_circ_g.1 AT1G03780_circ_g.2 AT1G03780_circ_g.3 AT1G03780_circ_g.4 AT1G03780_circ_g.5 AT1G03780_circ_g.6 AT1G03780_circ_g.7 AT1G03780_circ_g.8 AT1G03780_circ_g.9 AT1G03780_circ_g.10 AT1G03780_circ_g.11 AT1G03780_circ_g.12 AT1G03780_circ_g.13 AT1G03780_circ_g.14 AT1G03780_circ_g.15 AT1G03780_circ_g.17 AT1G03780_circ_g.18 AT1G03780_circ_g.19 AT1G03780_circ_g.20 AT1G03780_circ_g.21 AT1G03780_circ_g.22 AT1G03780_circ_g.23 AT1G03780_circ_g.24 AT1G03780_circ_g.25 AT1G03780_circ_g.26 AT1G03780_circ_g.27 AT1G03780_circ_g.28 AT1G03780_circ_g.29 AT1G03780_circ_g.30 AT1G03780_circ_g.31 AT1G03780_circ_g.32 AT1G03780_circ_g.33 AT1G03780_circ_g.34
Support reads	2
Tissues	inflorescences, whole_plant
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT1G03780.1:9 AT1G03780.2:10 AT1G03780.3:10

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGTAAGAAAAAAACCTTGAGCGTCTCTTCTTCAGCTTCATTGAAGTTGCACATGGCCTCTACCT
TGAACGATCTCCTTGCTTTGATTCTAGGAACCGAAGcttgtcgaatatatctaagacagattct
ggtcgtgatatcctctcatctgtcgcaaagtgaaactcttgaggtatcgttatgtgcttcttgg
tgttgcaa

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1283
Transcript exons: 949076-949207,949297-949452,949541-949621,949883-950125,
950198-950311,950404-950500,950582-950794,950881-951041,
951126-951211
CTTGTCGAATATATCTAAGACAGATTCTGGTCGTGATATCCTCTCATCTGTCGCAAAGTGAAAC
TCTTGAGGTATCGTTATGTGCTTCTTGGTGTTGCAAAAGATACCCATTTCTCCTTTACTTTCAA
ATATCTTTTTGTTCAAAGGTTTTGCTTTGAACTTTGGTGCCTTCTCCAGTTCCTCTTGCTCAAG
TTCTGCAGTAGTTTTTGCTATAGTAGGACGAGCTCTTAGCATTGTTTGGAGCACAGGGCTCTTT
GGTTCAGTAAGGTGATGCTTCTGATCATTATGCTGCTTAGACACTTCTGTTGAAGCTATTGAAG
ATGTCTCTGCATGCTGGTTAGCCCTTGCCATTGTTTGAAGATGAAATTCCTTCTTGTTCACAGG
TCGAGCTTTAAACTTGGGAATCTTTGCCAACATCTCTTCCTCAAGTTCTGCACTGCTCTTAACT
CTCAAAGGACGAGCTCGTTGGGACGTCACAAATTCGGGTTCCTTTGGTCTTGTCAGTGTCAGCT
TAGGTCGATTCTGGACGAATAGGTCTCGCGTGCTTGTTTGGAACTTCTTCATCAATTCAGCAGT
TGAAACAAAAGGTGCAATTTGCTCACGAACATAAACCTTTCTGTTTTCCTTCGGAGTGTGCTTA
GTGACTGAAGGGCATAAGTTGAAACCAGTGTTAACAAGACCATTTCTTGTCTTGTGGAGCAGAG
TTGCTGGTTTTGGATTGAGAATCTGTCTTGATTTTCCATCATCTAGCTTTTGCCTTTTGATGGC
TTGATTTTCTTGAATCAGATTGGTAGTGCTAGCTATGTTGTTAAGATTCGTTTCCCCTTTCACA
CTTTTCTGATGACTGCCTTTGGCTTGAGACTGGTTTTTAGGCCTTAGTGTAGATGGATTCTTCA
GCAGACTAGCTATCTTTCTAGCAGTTTGCTGCTTCTTAAGATCCACCGACTTTGCCCCTAGAGA
AAACTGCATTGGTGGTTTGGGTGTGCAAGCAGGAGCAATGTTCTCCTTGTCTTCTATTGGCTCA
GTCGTCGGATCGCTGGCATCTACGGTCTTGTTGTTGACCTCTGCGTCCTTGGAACTGATGCGAG
ACGGCTTAACAGTGCTTGCTTTAGAAGGAGCAACTTCTGCTTTCTTGGCCTGAGAAGGCTGCGA
TTGTAAAGAAACAATTGGAACTACTGGTTCTAACGGCTCTTTATCCTTGAGCGTCTCTTCTTCA
GCTTCATTGAAGTTGCACATGGCCTCTACCTTGAACGATCTCCTTGCTTTGATTCTAGGAACCG
AAG
Transcript length: 1346
Transcript exons: 949076-949207,949297-949452,949541-949621,949734-949796,
949883-950125,950198-950311,950404-950500,950582-950794,
950881-951041,951126-951211
CTTGTCGAATATATCTAAGACAGATTCTGGTCGTGATATCCTCTCATCTGTCGCAAAGTGAAAC
TCTTGAGGTATCGTTATGTGCTTCTTGGTGTTGCAAAAGATACCCATTTCTCCTTTACTTTCAA
ATATCTTTTTGTTCAAAGGTTTTGCTTTGAACTTTGGTGCCTTCTCCAGTTCCTCTTGCTCAAG
TTCTGCAGTAGTTTTTGCTATAGTAGGACGAGCTCTTAGCATTGTTTGGAGCACAGGGCTCTTT
GGTTCAGTAAGGTGATGCTTCTGATCATTATGCTGCTTAGACACTTCTGTTGAAGCTATTGAAG
ATGTCTCTGCATGCTGGTTAGCCCTTGCCATTGTTTGAAGATGAAATTCCTGAAATTCTGGCAG
ATGTGGTGTACTTCTTTGAGGTGCAGGCAAAGCTGGAGCTGCCAAAATCTTCTTGTTCACAGGT
CGAGCTTTAAACTTGGGAATCTTTGCCAACATCTCTTCCTCAAGTTCTGCACTGCTCTTAACTC
TCAAAGGACGAGCTCGTTGGGACGTCACAAATTCGGGTTCCTTTGGTCTTGTCAGTGTCAGCTT
AGGTCGATTCTGGACGAATAGGTCTCGCGTGCTTGTTTGGAACTTCTTCATCAATTCAGCAGTT
GAAACAAAAGGTGCAATTTGCTCACGAACATAAACCTTTCTGTTTTCCTTCGGAGTGTGCTTAG
TGACTGAAGGGCATAAGTTGAAACCAGTGTTAACAAGACCATTTCTTGTCTTGTGGAGCAGAGT
TGCTGGTTTTGGATTGAGAATCTGTCTTGATTTTCCATCATCTAGCTTTTGCCTTTTGATGGCT
TGATTTTCTTGAATCAGATTGGTAGTGCTAGCTATGTTGTTAAGATTCGTTTCCCCTTTCACAC
TTTTCTGATGACTGCCTTTGGCTTGAGACTGGTTTTTAGGCCTTAGTGTAGATGGATTCTTCAG
CAGACTAGCTATCTTTCTAGCAGTTTGCTGCTTCTTAAGATCCACCGACTTTGCCCCTAGAGAA
AACTGCATTGGTGGTTTGGGTGTGCAAGCAGGAGCAATGTTCTCCTTGTCTTCTATTGGCTCAG
TCGTCGGATCGCTGGCATCTACGGTCTTGTTGTTGACCTCTGCGTCCTTGGAACTGATGCGAGA
CGGCTTAACAGTGCTTGCTTTAGAAGGAGCAACTTCTGCTTTCTTGGCCTGAGAAGGCTGCGAT
TGTAAAGAAACAATTGGAACTACTGGTTCTAACGGCTCTTTATCCTTGAGCGTCTCTTCTTCAG
CTTCATTGAAGTTGCACATGGCCTCTACCTTGAACGATCTCCTTGCTTTGATTCTAGGAACCGA
AG
Transcript length: 218
Transcript exons: 949076-951211
CTTGTCGAATATATCTAAGACAGATTCTGGTCGTGATATCCTCTCATCTGTCGCAAAGTGAAAC
TCTTGAGGTATCGTTATGTGCTTCTTGGTGTTGCAAAAGATACCCATTTCTCCTTTACTTTCAA
ATATCTTGAGCGTCTCTTCTTCAGCTTCATTGAAGTTGCACATGGCCTCTACCTTGAACGATCT
CCTTGCTTTGATTCTAGGAACCGAAG
						
					

						Genomic sequence
						
							CTTGTCGAATATATCTAAGACAGATTCTGGTCGTGATATCCTCTCATCTGTCGCAAAGTGAAAC
TCTTGAGGTATCGTTATGTGCTTCTTGGTGTTGCAAAAGATACCCATTTCTCCTTTACTTTCAA
ATATCTGGGTGATTTGATGTGATTTCAAGTTAGATTAAGAGAGAGAAATGAAGTAAACAGTATT
AAACTACACCAGTTCAGTAGTTGTAGTACCTTTTTGTTCAAAGGTTTTGCTTTGAACTTTGGTG
CCTTCTCCAGTTCCTCTTGCTCAAGTTCTGCAGTAGTTTTTGCTATAGTAGGACGAGCTCTTAG
CATTGTTTGGAGCACAGGGCTCTTTGGTTCAGTAAGGTGATGCTTCTGATCATTATGCTGCGTG
GAAAACAGAGGAATATCAGATGGCATGAAATCAATTTATGTATACATACAACTTTTCTGGGAGT
GAAAAGAAGCTCCAGACCTGCTTAGACACTTCTGTTGAAGCTATTGAAGATGTCTCTGCATGCT
GGTTAGCCCTTGCCATTGTTTGAAGATGAAATTCCTGCGACAGTAAGAAATGAGATCCTTGTAG
AATAATAAAACAGTATCATTCAGCTATGAGTCAGTTCTAATGTGATGATACTCTCTGATGTGGG
TGGGGAGAGGTTATTTACCTGAAATTCTGGCAGATGTGGTGTACTTCTTTGAGGTGCAGGCAAA
GCTGGAGCTGCCAAAATCTGCATCAAATAATATAATGCATTGGATTCTTTTAGTTTTCTATTTC
TGAAGTACAAATATACCTCGGTGAAACTAGATGGATTACCTTCTTGTTCACAGGTCGAGCTTTA
AACTTGGGAATCTTTGCCAACATCTCTTCCTCAAGTTCTGCACTGCTCTTAACTCTCAAAGGAC
GAGCTCGTTGGGACGTCACAAATTCGGGTTCCTTTGGTCTTGTCAGTGTCAGCTTAGGTCGATT
CTGGACGAATAGGTCTCGCGTGCTTGTTTGGAACTTCTTCATCAATTCAGCAGTTGAAACAAAA
GGTGCAATTTGCTCACGAACATAAACCTGAAAAGTGAAAACAAGGTTTGAGAGGGTCTGACAGA
AAAAGTATACAAGCAACCATGAAGCACAACACACCTTTCTGTTTTCCTTCGGAGTGTGCTTAGT
GACTGAAGGGCATAAGTTGAAACCAGTGTTAACAAGACCATTTCTTGTCTTGTGGAGCAGAGTT
GCTGGTTTTGGATTGAGAATCTAGATAAATCAATGATAAGAAGGAAAAAGTTTCAGTCATGCAG
TGAGGTATGGAGTGAATGACATGCTGATTTTAAAACAATTTGGCTCACCTGTCTTGATTTTCCA
TCATCTAGCTTTTGCCTTTTGATGGCTTGATTTTCTTGAATCAGATTGGTAGTGCTAGCTATGT
TGTTAAGATTCGTTTCCCTGCAGTGAGACAATCAACACATTAAAACAACTATCACAAGAGAAAC
GTGAACCAGATTGGTTATTAAGAATGTGAGGTACCCTTTCACACTTTTCTGATGACTGCCTTTG
GCTTGAGACTGGTTTTTAGGCCTTAGTGTAGATGGATTCTTCAGCAGACTAGCTATCTTTCTAG
CAGTTTGCTGCTTCTTAAGATCCACCGACTTTGCCCCTAGAGAAAACTGCATTGGTGGTTTGGG
TGTGCAAGCAGGAGCAATGTTCTCCTTGTCTTCTATTGGCTCAGTCGTCGGATCGCTGTTAAAT
GAAAAAGAAGAAAGATCATTAGAATTGCCTCTTACTCACTTAACAGCGATACAATCTCCCAAAG
AACGATGGAGAACCTGGCATCTACGGTCTTGTTGTTGACCTCTGCGTCCTTGGAACTGATGCGA
GACGGCTTAACAGTGCTTGCTTTAGAAGGAGCAACTTCTGCTTTCTTGGCCTGAGAAGGCTGCG
ATTGTAAAGAAACAATTGGAACTACTGGTTCTAACGGCTCTTTATCCTGCAATAATCAGAATGA
TTAAAAAATGATCTTTCCTTGATCTTGTAATGGATGATAAATCAGTGTTGATTGTAAGAAAAAA
ACCTTGAGCGTCTCTTCTTCAGCTTCATTGAAGTTGCACATGGCCTCTACCTTGAACGATCTCC
TTGCTTTGATTCTAGGAACCGAAG
						
					

			
		

Sequences
Splice junction sequence	TGTAAGAAAAAAACCTTGAGCGTCTCTTCTTCAGCTTCATTGAAGTTGCACATGGCCTCTACCT TGAACGATCTCCTTGCTTTGATTCTAGGAACCGAAGcttgtcgaatatatctaagacagattct ggtcgtgatatcctctcatctgtcgcaaagtgaaactcttgaggtatcgttatgtgcttcttgg tgttgcaa
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1283 Transcript exons: 949076-949207,949297-949452,949541-949621,949883-950125, 950198-950311,950404-950500,950582-950794,950881-951041, 951126-951211 CTTGTCGAATATATCTAAGACAGATTCTGGTCGTGATATCCTCTCATCTGTCGCAAAGTGAAAC TCTTGAGGTATCGTTATGTGCTTCTTGGTGTTGCAAAAGATACCCATTTCTCCTTTACTTTCAA ATATCTTTTTGTTCAAAGGTTTTGCTTTGAACTTTGGTGCCTTCTCCAGTTCCTCTTGCTCAAG TTCTGCAGTAGTTTTTGCTATAGTAGGACGAGCTCTTAGCATTGTTTGGAGCACAGGGCTCTTT GGTTCAGTAAGGTGATGCTTCTGATCATTATGCTGCTTAGACACTTCTGTTGAAGCTATTGAAG ATGTCTCTGCATGCTGGTTAGCCCTTGCCATTGTTTGAAGATGAAATTCCTTCTTGTTCACAGG TCGAGCTTTAAACTTGGGAATCTTTGCCAACATCTCTTCCTCAAGTTCTGCACTGCTCTTAACT CTCAAAGGACGAGCTCGTTGGGACGTCACAAATTCGGGTTCCTTTGGTCTTGTCAGTGTCAGCT TAGGTCGATTCTGGACGAATAGGTCTCGCGTGCTTGTTTGGAACTTCTTCATCAATTCAGCAGT TGAAACAAAAGGTGCAATTTGCTCACGAACATAAACCTTTCTGTTTTCCTTCGGAGTGTGCTTA GTGACTGAAGGGCATAAGTTGAAACCAGTGTTAACAAGACCATTTCTTGTCTTGTGGAGCAGAG TTGCTGGTTTTGGATTGAGAATCTGTCTTGATTTTCCATCATCTAGCTTTTGCCTTTTGATGGC TTGATTTTCTTGAATCAGATTGGTAGTGCTAGCTATGTTGTTAAGATTCGTTTCCCCTTTCACA CTTTTCTGATGACTGCCTTTGGCTTGAGACTGGTTTTTAGGCCTTAGTGTAGATGGATTCTTCA GCAGACTAGCTATCTTTCTAGCAGTTTGCTGCTTCTTAAGATCCACCGACTTTGCCCCTAGAGA AAACTGCATTGGTGGTTTGGGTGTGCAAGCAGGAGCAATGTTCTCCTTGTCTTCTATTGGCTCA GTCGTCGGATCGCTGGCATCTACGGTCTTGTTGTTGACCTCTGCGTCCTTGGAACTGATGCGAG ACGGCTTAACAGTGCTTGCTTTAGAAGGAGCAACTTCTGCTTTCTTGGCCTGAGAAGGCTGCGA TTGTAAAGAAACAATTGGAACTACTGGTTCTAACGGCTCTTTATCCTTGAGCGTCTCTTCTTCA GCTTCATTGAAGTTGCACATGGCCTCTACCTTGAACGATCTCCTTGCTTTGATTCTAGGAACCG AAG Transcript length: 1346 Transcript exons: 949076-949207,949297-949452,949541-949621,949734-949796, 949883-950125,950198-950311,950404-950500,950582-950794, 950881-951041,951126-951211 CTTGTCGAATATATCTAAGACAGATTCTGGTCGTGATATCCTCTCATCTGTCGCAAAGTGAAAC TCTTGAGGTATCGTTATGTGCTTCTTGGTGTTGCAAAAGATACCCATTTCTCCTTTACTTTCAA ATATCTTTTTGTTCAAAGGTTTTGCTTTGAACTTTGGTGCCTTCTCCAGTTCCTCTTGCTCAAG TTCTGCAGTAGTTTTTGCTATAGTAGGACGAGCTCTTAGCATTGTTTGGAGCACAGGGCTCTTT GGTTCAGTAAGGTGATGCTTCTGATCATTATGCTGCTTAGACACTTCTGTTGAAGCTATTGAAG ATGTCTCTGCATGCTGGTTAGCCCTTGCCATTGTTTGAAGATGAAATTCCTGAAATTCTGGCAG ATGTGGTGTACTTCTTTGAGGTGCAGGCAAAGCTGGAGCTGCCAAAATCTTCTTGTTCACAGGT CGAGCTTTAAACTTGGGAATCTTTGCCAACATCTCTTCCTCAAGTTCTGCACTGCTCTTAACTC TCAAAGGACGAGCTCGTTGGGACGTCACAAATTCGGGTTCCTTTGGTCTTGTCAGTGTCAGCTT AGGTCGATTCTGGACGAATAGGTCTCGCGTGCTTGTTTGGAACTTCTTCATCAATTCAGCAGTT GAAACAAAAGGTGCAATTTGCTCACGAACATAAACCTTTCTGTTTTCCTTCGGAGTGTGCTTAG TGACTGAAGGGCATAAGTTGAAACCAGTGTTAACAAGACCATTTCTTGTCTTGTGGAGCAGAGT TGCTGGTTTTGGATTGAGAATCTGTCTTGATTTTCCATCATCTAGCTTTTGCCTTTTGATGGCT TGATTTTCTTGAATCAGATTGGTAGTGCTAGCTATGTTGTTAAGATTCGTTTCCCCTTTCACAC TTTTCTGATGACTGCCTTTGGCTTGAGACTGGTTTTTAGGCCTTAGTGTAGATGGATTCTTCAG CAGACTAGCTATCTTTCTAGCAGTTTGCTGCTTCTTAAGATCCACCGACTTTGCCCCTAGAGAA AACTGCATTGGTGGTTTGGGTGTGCAAGCAGGAGCAATGTTCTCCTTGTCTTCTATTGGCTCAG TCGTCGGATCGCTGGCATCTACGGTCTTGTTGTTGACCTCTGCGTCCTTGGAACTGATGCGAGA CGGCTTAACAGTGCTTGCTTTAGAAGGAGCAACTTCTGCTTTCTTGGCCTGAGAAGGCTGCGAT TGTAAAGAAACAATTGGAACTACTGGTTCTAACGGCTCTTTATCCTTGAGCGTCTCTTCTTCAG CTTCATTGAAGTTGCACATGGCCTCTACCTTGAACGATCTCCTTGCTTTGATTCTAGGAACCGA AG Transcript length: 218 Transcript exons: 949076-951211 CTTGTCGAATATATCTAAGACAGATTCTGGTCGTGATATCCTCTCATCTGTCGCAAAGTGAAAC TCTTGAGGTATCGTTATGTGCTTCTTGGTGTTGCAAAAGATACCCATTTCTCCTTTACTTTCAA ATATCTTGAGCGTCTCTTCTTCAGCTTCATTGAAGTTGCACATGGCCTCTACCTTGAACGATCT CCTTGCTTTGATTCTAGGAACCGAAG
Genomic sequence	CTTGTCGAATATATCTAAGACAGATTCTGGTCGTGATATCCTCTCATCTGTCGCAAAGTGAAAC TCTTGAGGTATCGTTATGTGCTTCTTGGTGTTGCAAAAGATACCCATTTCTCCTTTACTTTCAA ATATCTGGGTGATTTGATGTGATTTCAAGTTAGATTAAGAGAGAGAAATGAAGTAAACAGTATT AAACTACACCAGTTCAGTAGTTGTAGTACCTTTTTGTTCAAAGGTTTTGCTTTGAACTTTGGTG CCTTCTCCAGTTCCTCTTGCTCAAGTTCTGCAGTAGTTTTTGCTATAGTAGGACGAGCTCTTAG CATTGTTTGGAGCACAGGGCTCTTTGGTTCAGTAAGGTGATGCTTCTGATCATTATGCTGCGTG GAAAACAGAGGAATATCAGATGGCATGAAATCAATTTATGTATACATACAACTTTTCTGGGAGT GAAAAGAAGCTCCAGACCTGCTTAGACACTTCTGTTGAAGCTATTGAAGATGTCTCTGCATGCT GGTTAGCCCTTGCCATTGTTTGAAGATGAAATTCCTGCGACAGTAAGAAATGAGATCCTTGTAG AATAATAAAACAGTATCATTCAGCTATGAGTCAGTTCTAATGTGATGATACTCTCTGATGTGGG TGGGGAGAGGTTATTTACCTGAAATTCTGGCAGATGTGGTGTACTTCTTTGAGGTGCAGGCAAA GCTGGAGCTGCCAAAATCTGCATCAAATAATATAATGCATTGGATTCTTTTAGTTTTCTATTTC TGAAGTACAAATATACCTCGGTGAAACTAGATGGATTACCTTCTTGTTCACAGGTCGAGCTTTA AACTTGGGAATCTTTGCCAACATCTCTTCCTCAAGTTCTGCACTGCTCTTAACTCTCAAAGGAC GAGCTCGTTGGGACGTCACAAATTCGGGTTCCTTTGGTCTTGTCAGTGTCAGCTTAGGTCGATT CTGGACGAATAGGTCTCGCGTGCTTGTTTGGAACTTCTTCATCAATTCAGCAGTTGAAACAAAA GGTGCAATTTGCTCACGAACATAAACCTGAAAAGTGAAAACAAGGTTTGAGAGGGTCTGACAGA AAAAGTATACAAGCAACCATGAAGCACAACACACCTTTCTGTTTTCCTTCGGAGTGTGCTTAGT GACTGAAGGGCATAAGTTGAAACCAGTGTTAACAAGACCATTTCTTGTCTTGTGGAGCAGAGTT GCTGGTTTTGGATTGAGAATCTAGATAAATCAATGATAAGAAGGAAAAAGTTTCAGTCATGCAG TGAGGTATGGAGTGAATGACATGCTGATTTTAAAACAATTTGGCTCACCTGTCTTGATTTTCCA TCATCTAGCTTTTGCCTTTTGATGGCTTGATTTTCTTGAATCAGATTGGTAGTGCTAGCTATGT TGTTAAGATTCGTTTCCCTGCAGTGAGACAATCAACACATTAAAACAACTATCACAAGAGAAAC GTGAACCAGATTGGTTATTAAGAATGTGAGGTACCCTTTCACACTTTTCTGATGACTGCCTTTG GCTTGAGACTGGTTTTTAGGCCTTAGTGTAGATGGATTCTTCAGCAGACTAGCTATCTTTCTAG CAGTTTGCTGCTTCTTAAGATCCACCGACTTTGCCCCTAGAGAAAACTGCATTGGTGGTTTGGG TGTGCAAGCAGGAGCAATGTTCTCCTTGTCTTCTATTGGCTCAGTCGTCGGATCGCTGTTAAAT GAAAAAGAAGAAAGATCATTAGAATTGCCTCTTACTCACTTAACAGCGATACAATCTCCCAAAG AACGATGGAGAACCTGGCATCTACGGTCTTGTTGTTGACCTCTGCGTCCTTGGAACTGATGCGA GACGGCTTAACAGTGCTTGCTTTAGAAGGAGCAACTTCTGCTTTCTTGGCCTGAGAAGGCTGCG ATTGTAAAGAAACAATTGGAACTACTGGTTCTAACGGCTCTTTATCCTGCAATAATCAGAATGA TTAAAAAATGATCTTTCCTTGATCTTGTAATGGATGATAAATCAGTGTTGATTGTAAGAAAAAA ACCTTGAGCGTCTCTTCTTCAGCTTCATTGAAGTTGCACATGGCCTCTACCTTGAACGATCTCC TTGCTTTGATTCTAGGAACCGAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.191075843

Conservation Information
Conserved circRNAs	NA
PMCS	0.191075843

			
						 Functional Information
					
						Coding potential
						N
					
						Potential coding position
						
							NA
						
						Potential amino acid sequence
						
							NA
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	N
Potential coding position	NA
Potential amino acid sequence	NA
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of AT1G03780_circ_g.16

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