Splice junction sequence |
CAAGTTCTGCAGTAGTTTTTGCTATAGTAGGACGAGCTCTTAGCATTGTTTGGAGCACAGGGCT CTTTGGTTCAGTAAGGTGATGCTTCTGATCATTATGtcttttataactggttgtgctttgaaga gcctcttctgggcttcttctgtctccattctcctcctctcttccctttctcttcgcatttcctc ttcgtgcc
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 620 Transcript exons: 948429-948640,948697-948816,949076-949207,949297-949452 TCTTTTATAACTGGTTGTGCTTTGAAGAGCCTCTTCTGGGCTTCTTCTGTCTCCATTCTCCTCC TCTCTTCCCTTTCTCTTCGCATTTCCTCTTCGTGCCTTACTAGACTCTCTAACTGGAACGGTTC TGGTTGTGTGCATTGCTTAGGTTCTGGTTTTGGTGGTACCTGAGAGTTGGAACACGTAAGATTT ATCAACACCATCTCTCTCTTCACTGGATAGTCCGTCGTGTAAGGATATGGATTTGCCTTTGGAA CTCTTGCCTTTACATCTCCTAATTTCTTATACATGAGTTCCATATAAAATTTCTTCTCTTTCTC AGCGCCTCTTTCCTTGTCGAATATATCTAAGACAGATTCTGGTCGTGATATCCTCTCATCTGTC GCAAAGTGAAACTCTTGAGGTATCGTTATGTGCTTCTTGGTGTTGCAAAAGATACCCATTTCTC CTTTACTTTCAAATATCTTTTTGTTCAAAGGTTTTGCTTTGAACTTTGGTGCCTTCTCCAGTTC CTCTTGCTCAAGTTCTGCAGTAGTTTTTGCTATAGTAGGACGAGCTCTTAGCATTGTTTGGAGC ACAGGGCTCTTTGGTTCAGTAAGGTGATGCTTCTGATCATTATG
Transcript length: 656 Transcript exons: 948429-948595,948697-948816,948912-948992,949076-949207, 949297-949452 TCTTTTATAACTGGTTGTGCTTTGAAGAGCCTCTTCTGGGCTTCTTCTGTCTCCATTCTCCTCC TCTCTTCCCTTTCTCTTCGCATTTCCTCTTCGTGCCTTACTAGACTCTCTAACTGGAACGGTTC TGGTTGTGTGCATTGCTTAGGTTCTGGTTTTGGTGGTACCACTGGATAGTCCGTCGTGTAAGGA TATGGATTTGCCTTTGGAACTCTTGCCTTTACATCTCCTAATTTCTTATACATGAGTTCCATAT AAAATTTCTTCTCTTTCTCAGCGCCTCTTTCTTCTGTCTTAAGATTGAAGGGGTTTGGAGCAGT GTTCCTTGGTAGAGGTTTTTCATGGCAAGATTCGGAGTTCAGTGAGAGCTTGTCGAATATATCT AAGACAGATTCTGGTCGTGATATCCTCTCATCTGTCGCAAAGTGAAACTCTTGAGGTATCGTTA TGTGCTTCTTGGTGTTGCAAAAGATACCCATTTCTCCTTTACTTTCAAATATCTTTTTGTTCAA AGGTTTTGCTTTGAACTTTGGTGCCTTCTCCAGTTCCTCTTGCTCAAGTTCTGCAGTAGTTTTT GCTATAGTAGGACGAGCTCTTAGCATTGTTTGGAGCACAGGGCTCTTTGGTTCAGTAAGGTGAT GCTTCTGATCATTATG
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Genomic sequence |
TCTTTTATAACTGGTTGTGCTTTGAAGAGCCTCTTCTGGGCTTCTTCTGTCTCCATTCTCCTCC TCTCTTCCCTTTCTCTTCGCATTTCCTCTTCGTGCCTTACTAGACTCTCTAACTGGAACGGTTC TGGTTGTGTGCATTGCTTAGGTTCTGGTTTTGGTGGTACCTGAGAGTTGGAACACGTAAGATTT ATCAACACCATCTCTCTCTTCTGCAACACAAAAACAAAACCAAGGAAGGAAAATAAGAAGTTTA GGATGTACATACCACTGGATAGTCCGTCGTGTAAGGATATGGATTTGCCTTTGGAACTCTTGCC TTTACATCTCCTAATTTCTTATACATGAGTTCCATATAAAATTTCTTCTCTTTCTCAGCGCCTC TTTCCTGGATTCCACAAAAAAGTAGTTTTCAAAGAACGGTCAGCAAAGATTGGTGGCAAGTCAT TTGGACCTTAGAGAGGTTGTTCGTTGTACACATACTTCTGTCTTAAGATTGAAGGGGTTTGGAG CAGTGTTCCTTGGTAGAGGTTTTTCATGGCAAGATTCGGAGTTCAGTGAGAGCTGAAAAGAAAA ATTGTGTCAAAGACCGAGACATCCAGAGGAAAATACTAAAGAATACAGTGGTTCTGTTAATTGA AGTATACCTTGTCGAATATATCTAAGACAGATTCTGGTCGTGATATCCTCTCATCTGTCGCAAA GTGAAACTCTTGAGGTATCGTTATGTGCTTCTTGGTGTTGCAAAAGATACCCATTTCTCCTTTA CTTTCAAATATCTGGGTGATTTGATGTGATTTCAAGTTAGATTAAGAGAGAGAAATGAAGTAAA CAGTATTAAACTACACCAGTTCAGTAGTTGTAGTACCTTTTTGTTCAAAGGTTTTGCTTTGAAC TTTGGTGCCTTCTCCAGTTCCTCTTGCTCAAGTTCTGCAGTAGTTTTTGCTATAGTAGGACGAG CTCTTAGCATTGTTTGGAGCACAGGGCTCTTTGGTTCAGTAAGGTGATGCTTCTGATCATTATG |