Plant Circular RNA Database

Detail information of Zm00001d046579_circ_g.5

			
						 General Information
					
						CircRNA Name
						Zm00001d046579_circ_g.5
					
						ID in PlantcircBase
						zma_circ_009984
					
						Alias
						zma_circ_0003263
					
						Organism
						
							Zea mays						
					
						Position
						
							chr9: 96781626-96785764  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d046579						
					
						Parent gene annotation
						
							Transcription initiation factor TFIID subunit 1
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d046579_circ_g.1 Zm00001d046579_circ_g.2 Zm00001d046579_circ_g.3 Zm00001d046579_circ_g.4 Zm00001d046579_circ_g.6 Zm00001d046579_circ_g.7 Zm00001d046579_circ_g.8 Zm00001d046579_circ_g.9 Zm00001d046579_circ_g.10 Zm00001d046579_circ_g.11 Zm00001d046579_circ_g.12 Zm00001d046579_circ_g.13 Zm00001d046579_circ_g.14 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d046579_T026:3
Zm00001d046579_T024:6
Zm00001d046579_T019:6
Zm00001d046579_T005:6
Zm00001d046579_T007:6
Zm00001d046579_T018:6
Zm00001d046579_T027:1
Zm00001d046579_T025:5
Zm00001d046579_T023:6
Zm00001d046579_T001:6
Zm00001d046579_T015:6
Zm00001d046579_T020:6
Zm00001d046579_T004:6
Zm00001d046579_T009:6
Zm00001d046579_T016:6
Zm00001d046579_T002:6
Zm00001d046579_T011:6
Zm00001d046579_T006:6
Zm00001d046579_T003:6
Zm00001d046579_T008:6

General Information
CircRNA Name	Zm00001d046579_circ_g.5
ID in PlantcircBase	zma_circ_009984
Alias	zma_circ_0003263
Organism	Zea mays
Position	chr9: 96781626-96785764 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d046579
Parent gene annotation	Transcription initiation factor TFIID subunit 1
Parent gene strand	+
Alternative splicing	Zm00001d046579_circ_g.1 Zm00001d046579_circ_g.2 Zm00001d046579_circ_g.3 Zm00001d046579_circ_g.4 Zm00001d046579_circ_g.6 Zm00001d046579_circ_g.7 Zm00001d046579_circ_g.8 Zm00001d046579_circ_g.9 Zm00001d046579_circ_g.10 Zm00001d046579_circ_g.11 Zm00001d046579_circ_g.12 Zm00001d046579_circ_g.13 Zm00001d046579_circ_g.14
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d046579_T026:3 Zm00001d046579_T024:6 Zm00001d046579_T019:6 Zm00001d046579_T005:6 Zm00001d046579_T007:6 Zm00001d046579_T018:6 Zm00001d046579_T027:1 Zm00001d046579_T025:5 Zm00001d046579_T023:6 Zm00001d046579_T001:6 Zm00001d046579_T015:6 Zm00001d046579_T020:6 Zm00001d046579_T004:6 Zm00001d046579_T009:6 Zm00001d046579_T016:6 Zm00001d046579_T002:6 Zm00001d046579_T011:6 Zm00001d046579_T006:6 Zm00001d046579_T003:6 Zm00001d046579_T008:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GAGGATGGGAACGCTATCCTGAGATTCTCTGAAATTTTTGGTATCCAAGAGCCTGTAAGAAAAG
TGAAGACAGATCACCACAAACGACCAGTGGATAAAGatgacgatgacgacgaggattatgagga
gcctggtggaggaaatcacttattggggtttatgttcggcaatgtagatgattctggtgattta
gatgctga

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							ATGACGATGACGACGAGGATTATGAGGAGCCTGGTGGAGGAAATCACTTATTGGGGTTTATGTT
CGGCAATGTAGATGATTCTGGTGATTTAGATGCTGACTATCTTGATGAGGTAGACACTTCTTTA
TCTGTTTTTGTTGACATGCAAATGTCCTGTTTTTTGTTGTTTTTATTATTTTATTTCATGTGTC
TGTCTCTAGGAGATGACATTCATTTTATTCGTTTCACCTTTTCAATTGTGTGGATGTCTGATAT
CTGTATCTGTTTTTGATCTTAGTGCATTCTCAATTGGTCATGATTTTATACAGATTTAACTTCT
TTGTTGGTTCTCTTTTTCTTAACATTTTGATCCTTAGACTTGTGTTTTAGGGTGCTCGGTTGCT
TTATAGGAACCATCATCACTATAAGAACCATATTCCTCTGATTAAATTAATTTAATTTGAGTTC
TGGAAATGATGAGATAGGGAAATTCAATGCGACGAAACCAAATTTCTCAGTCCATGCATTGTAA
TTTTCTCGTAATTTGGATGTTTTTTGAATAATAGTTAGTAGAACTCACTAAATTTTAGCCAGAA
TAAAGGTTAGTTGCTAAACCTTAGGGTACTTTGGTTTTATTGTTTTTCCATTGTCTGCAGGAAA
CAAAGTCATTGTTTATTGTTTAGTTATGTTTATAATGCAATTTGGATGTTGCATTTATTTATAC
TTTTATTTTGCTTAACTCAGGATGCAAAGGAACACCTTTTTGCACTGGCAGATAAGCTTGGTCC
ATCTCTCAAAGACATTGACGTAAGTTATCTTATGCGTATAGTTAATCTTACTTATCTATTTCAT
TACCAAACAAGTTAATACTATGTTGTTTGCTAATTAGCTAATGAAGTCTTCTCCAGCACCAACT
GATCCTTCCGAACAAGGTTAGTGACATATTACTGTTTCCATATAAGCTGCACCTACAGTTTTGA
GAGTTATTCATCAAGCCAACTTTGCCATTGCTTAGGAAGACCTTATTCTTCTTTTTCGTGTCAA
ACTATGCACATAATTGATAACACATCTTTTTGTTGTTATGTAGACTATGATGAGAAGGCAGAAG
ATGCTGTTGATTATGAAGATATTGATGAAGAATATGATGGACCTGAAGTTGAGGCAACTACAGA
GGAAGACAATGTGTTGTCAAAAAAGGATTACTTCTCTTCATCTACAGTGTATGCATCAGTCAAC
AGTACAGTTTCAGTGTTTGACGATGAAAACTACGATGAGGAAGAAGAACCACCCAATGATAATG
AGCCTCCTGGTGATAGTGCTGCCCAAAATTTATCTTCAGGTGATACTGGATAATGTGCCTAATG
TTTTCAAGTTCCATTTATGTTAGCATTCATCCTATTTTTCTTACTACTTTATCGTTTCCATGCT
GCCCCTTTTATTTGTTCCTTCTATCTAGTGATTAAACATTTGTAGCTTGGCACCTCCGTTTTGG
TCTGCAACTGTATTTGTCTTTATATTTGCATGTCCAACCTCCCTTCTGCTGGCTTGGGCAAGCG
TTGATGGTAGCGATGAAGTCTGTTCCAGTCTAACTCTAATAAAATGAACTGAAGACTTGACCAT
CTTTTTTTCACCTTTTTCTATTGTGATCATAGACTCTAGTTTGGCGTAAACTTCTGTTATGATC
GCTAGATCAGTGAGGGATTGGAGAGGGTATCGATGGGTAGGAACGTCGGCCGGGGGCCTCTGCC
CACGGCCTAGCAAGAGGAGGGTTTCTCCCTTCTAATTCTTGCTTAATTTATTTCTCATCCATTG
ATTACATAAATAGGCCAGCTGGCCGCCCCTATCTAGCTAGAGATCCTTATCTCCTTAAAACTCT
CCTAAAAACTCTCAACAAACTACTAACTGATAACCTTCCTAGATAATCTCAACTAATCTTCTAA
TCTTATCTCTAACTATCCTTATCTAATCCCCCTTGGAGGGCCCATGGTTGCTGCTGCTGCAGCC
CCTCCGTGGGCCTCCTTAGGCCCTGAAACTACACCCCTCCTGGATAAGCAACTCGTCCTCGAGC
TGTAGCATGACGGGTGCTCAAAGATCGAGTCTACTTGACCCAAAACTAGACACCTAGAAGACAA
ACCTTTTACATCTCGACTTATCTTATTATTCCGAATCTGAATTTTTTTGACCCCATAAGATAAG
GCGGACACCCTCCGCGCATTGGACTTGCACGTGTGTAGCCTCCTGGATCACATGGACGCCATCT
GGACGAAAGGGAAGCACATGGACGGGCTCCTGGAGTAGGTCGCAACAATAACCAGCGGAGGCGC
CCTCGTGGCGGCCGGTAGCGGAATGTGGTGGCGCTAAATAGTGCGCCCTTGTCGATGACGAGGG
GAGTGCCTTCCCTACCGCCGCTGTCGTAGAGTTGAAGTTCGTCGCCCGTGGGACACGTACCATG
CTCACACTTGGAGATAGCGGCCCGGTGCCGCTGCTGATGGCCGTCCGACAGGGCGAGGTCGCAC
CCCTGTGTGCCGAGGTCAACCGTCACCAAGGCTGCCTCGAGCATCTGCCGGCGCATCTCCCGCA
CTCTCCGTCGTGTAAGGAAGCCACAAGCAGCAGCCTGTATGCCCACAGCCGCTGACGTCTGGAG
CCATGCGGACAACACCAGCTGGTGCTGCTCATGTTGCACTACTGCGGTGATTTGCAACAGCCCT
TGCTCAACCTTCTGGAGCGTGGCTTGCATCTTTGCGAGATCAGCCCTAATGTTGGTCCACAAGT
CCCCCATCGATGGAGCTAGTGATTGCTGAGCCGTGGCTGCCCCTAGTGGCGTCGCCCATGGGGA
CGGAGACGCCGTCAATGAAAATGATGTGACGAAATTTGGCGTTGTCCTTGGGGATGGGCATGCC
GGCGTCCATGATGTGGTGTCAAAATTAGCAGGCTATGCTGCCCATTGAGATAGGGACGCCAGTT
GCCAGGATGGCGTGACGAAGGTGGCATGCGGCGCAACCCATGGAGATGGTGACATCGGTTGCCA
GGACGGCGTGACGAAGGTGACATGCGGCGCCATTTCATGGAGATGGGGACGCCGGTTGCCAGGA
TGACACCGCGAAATTGGCAGCAGAAGCCATGGGATCAGATCGAAACCCAAGCTATCCGATACCA
GATGTTATGATCGCTAGATCGGTGAGGGATTGGAGAAGAGTATCGATGGGTAGGAACGTCGGCC
GGGGGCCTCCGCCCATGGCCGAGCAAGAGGAGGGTTTCTCCCTTCTAATTCTTGCTTACTTTAT
TTCTCATCCATTGATTACATAAATAGGCCAGCTGGCCGCCCCTATCTAGCTAGAGATCCTTATC
TCCTTAAAACTCTCAACAAACTACTAACTGATAACCTTCCTAGATAATCTCAACTAATCTCCTA
AATAATCTCAACTAATATTCTAATCTTATCTCTAACTATCCTTATCTAATCCCCTTGGAGGCCC
CATGGTTGCTGCTGCCGCCGCAGCCCCTCCGTGGGCCTCCTTAGGCCCTGACAACTTCACTTTA
AATTATTGAAGATGAAAACTTGTCAGAATGTTATGCAACCTTTTTGTTCAAGCAAACTTGATTT
TAATTGCCGAGCACATGTTATAAAATAAAAGAACATTTTTTTGTTTTTTTCTTGAAACAACTAG
AGCATTCATCTGTCAGCTCTAACACATCGAATTTCAATCTTTTTATCTATTAATATTTGTTATA
GCTAAGCTAACTGACTTGATTCTCATTTCTCTTAATCTTTTTGGATATAGTTTCTATCGAGCAG
GCAGATACGACAACCTCAAGCGATAACCTTGCCATGGAAAAGATTGGCTTGTTATCACATCCAG
AGGAAAACATGGACTTTGAATATGAAGATTTGGAGGTATATGAAGCCTGAACCTAGAAATTAAC
ATTGCATTGTCCTGTATCATATTTGTATAATTAAAGCACTTCTCTTATTCATCTCTAATTAAGC
AGAATGAAAAGGGCACTGGGGAAGGCCAGCTTGAGCCTGAAAGTGCAACTTCCCTTCCTGTTTT
ATGCATAGAGGATGGGAACGCTATCCTGAGATTCTCTGAAATTTTTGGTATCCAAGAGCCTGTA
AGAAAAGTGAAGACAGATCACCACAAACGACCAGTGGATAAAG
						
					

			
		

Sequences
Splice junction sequence	GAGGATGGGAACGCTATCCTGAGATTCTCTGAAATTTTTGGTATCCAAGAGCCTGTAAGAAAAG TGAAGACAGATCACCACAAACGACCAGTGGATAAAGatgacgatgacgacgaggattatgagga gcctggtggaggaaatcacttattggggtttatgttcggcaatgtagatgattctggtgattta gatgctga
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	ATGACGATGACGACGAGGATTATGAGGAGCCTGGTGGAGGAAATCACTTATTGGGGTTTATGTT CGGCAATGTAGATGATTCTGGTGATTTAGATGCTGACTATCTTGATGAGGTAGACACTTCTTTA TCTGTTTTTGTTGACATGCAAATGTCCTGTTTTTTGTTGTTTTTATTATTTTATTTCATGTGTC TGTCTCTAGGAGATGACATTCATTTTATTCGTTTCACCTTTTCAATTGTGTGGATGTCTGATAT CTGTATCTGTTTTTGATCTTAGTGCATTCTCAATTGGTCATGATTTTATACAGATTTAACTTCT TTGTTGGTTCTCTTTTTCTTAACATTTTGATCCTTAGACTTGTGTTTTAGGGTGCTCGGTTGCT TTATAGGAACCATCATCACTATAAGAACCATATTCCTCTGATTAAATTAATTTAATTTGAGTTC TGGAAATGATGAGATAGGGAAATTCAATGCGACGAAACCAAATTTCTCAGTCCATGCATTGTAA TTTTCTCGTAATTTGGATGTTTTTTGAATAATAGTTAGTAGAACTCACTAAATTTTAGCCAGAA TAAAGGTTAGTTGCTAAACCTTAGGGTACTTTGGTTTTATTGTTTTTCCATTGTCTGCAGGAAA CAAAGTCATTGTTTATTGTTTAGTTATGTTTATAATGCAATTTGGATGTTGCATTTATTTATAC TTTTATTTTGCTTAACTCAGGATGCAAAGGAACACCTTTTTGCACTGGCAGATAAGCTTGGTCC ATCTCTCAAAGACATTGACGTAAGTTATCTTATGCGTATAGTTAATCTTACTTATCTATTTCAT TACCAAACAAGTTAATACTATGTTGTTTGCTAATTAGCTAATGAAGTCTTCTCCAGCACCAACT GATCCTTCCGAACAAGGTTAGTGACATATTACTGTTTCCATATAAGCTGCACCTACAGTTTTGA GAGTTATTCATCAAGCCAACTTTGCCATTGCTTAGGAAGACCTTATTCTTCTTTTTCGTGTCAA ACTATGCACATAATTGATAACACATCTTTTTGTTGTTATGTAGACTATGATGAGAAGGCAGAAG ATGCTGTTGATTATGAAGATATTGATGAAGAATATGATGGACCTGAAGTTGAGGCAACTACAGA GGAAGACAATGTGTTGTCAAAAAAGGATTACTTCTCTTCATCTACAGTGTATGCATCAGTCAAC AGTACAGTTTCAGTGTTTGACGATGAAAACTACGATGAGGAAGAAGAACCACCCAATGATAATG AGCCTCCTGGTGATAGTGCTGCCCAAAATTTATCTTCAGGTGATACTGGATAATGTGCCTAATG TTTTCAAGTTCCATTTATGTTAGCATTCATCCTATTTTTCTTACTACTTTATCGTTTCCATGCT GCCCCTTTTATTTGTTCCTTCTATCTAGTGATTAAACATTTGTAGCTTGGCACCTCCGTTTTGG TCTGCAACTGTATTTGTCTTTATATTTGCATGTCCAACCTCCCTTCTGCTGGCTTGGGCAAGCG TTGATGGTAGCGATGAAGTCTGTTCCAGTCTAACTCTAATAAAATGAACTGAAGACTTGACCAT CTTTTTTTCACCTTTTTCTATTGTGATCATAGACTCTAGTTTGGCGTAAACTTCTGTTATGATC GCTAGATCAGTGAGGGATTGGAGAGGGTATCGATGGGTAGGAACGTCGGCCGGGGGCCTCTGCC CACGGCCTAGCAAGAGGAGGGTTTCTCCCTTCTAATTCTTGCTTAATTTATTTCTCATCCATTG ATTACATAAATAGGCCAGCTGGCCGCCCCTATCTAGCTAGAGATCCTTATCTCCTTAAAACTCT CCTAAAAACTCTCAACAAACTACTAACTGATAACCTTCCTAGATAATCTCAACTAATCTTCTAA TCTTATCTCTAACTATCCTTATCTAATCCCCCTTGGAGGGCCCATGGTTGCTGCTGCTGCAGCC CCTCCGTGGGCCTCCTTAGGCCCTGAAACTACACCCCTCCTGGATAAGCAACTCGTCCTCGAGC TGTAGCATGACGGGTGCTCAAAGATCGAGTCTACTTGACCCAAAACTAGACACCTAGAAGACAA ACCTTTTACATCTCGACTTATCTTATTATTCCGAATCTGAATTTTTTTGACCCCATAAGATAAG GCGGACACCCTCCGCGCATTGGACTTGCACGTGTGTAGCCTCCTGGATCACATGGACGCCATCT GGACGAAAGGGAAGCACATGGACGGGCTCCTGGAGTAGGTCGCAACAATAACCAGCGGAGGCGC CCTCGTGGCGGCCGGTAGCGGAATGTGGTGGCGCTAAATAGTGCGCCCTTGTCGATGACGAGGG GAGTGCCTTCCCTACCGCCGCTGTCGTAGAGTTGAAGTTCGTCGCCCGTGGGACACGTACCATG CTCACACTTGGAGATAGCGGCCCGGTGCCGCTGCTGATGGCCGTCCGACAGGGCGAGGTCGCAC CCCTGTGTGCCGAGGTCAACCGTCACCAAGGCTGCCTCGAGCATCTGCCGGCGCATCTCCCGCA CTCTCCGTCGTGTAAGGAAGCCACAAGCAGCAGCCTGTATGCCCACAGCCGCTGACGTCTGGAG CCATGCGGACAACACCAGCTGGTGCTGCTCATGTTGCACTACTGCGGTGATTTGCAACAGCCCT TGCTCAACCTTCTGGAGCGTGGCTTGCATCTTTGCGAGATCAGCCCTAATGTTGGTCCACAAGT CCCCCATCGATGGAGCTAGTGATTGCTGAGCCGTGGCTGCCCCTAGTGGCGTCGCCCATGGGGA CGGAGACGCCGTCAATGAAAATGATGTGACGAAATTTGGCGTTGTCCTTGGGGATGGGCATGCC GGCGTCCATGATGTGGTGTCAAAATTAGCAGGCTATGCTGCCCATTGAGATAGGGACGCCAGTT GCCAGGATGGCGTGACGAAGGTGGCATGCGGCGCAACCCATGGAGATGGTGACATCGGTTGCCA GGACGGCGTGACGAAGGTGACATGCGGCGCCATTTCATGGAGATGGGGACGCCGGTTGCCAGGA TGACACCGCGAAATTGGCAGCAGAAGCCATGGGATCAGATCGAAACCCAAGCTATCCGATACCA GATGTTATGATCGCTAGATCGGTGAGGGATTGGAGAAGAGTATCGATGGGTAGGAACGTCGGCC GGGGGCCTCCGCCCATGGCCGAGCAAGAGGAGGGTTTCTCCCTTCTAATTCTTGCTTACTTTAT TTCTCATCCATTGATTACATAAATAGGCCAGCTGGCCGCCCCTATCTAGCTAGAGATCCTTATC TCCTTAAAACTCTCAACAAACTACTAACTGATAACCTTCCTAGATAATCTCAACTAATCTCCTA AATAATCTCAACTAATATTCTAATCTTATCTCTAACTATCCTTATCTAATCCCCTTGGAGGCCC CATGGTTGCTGCTGCCGCCGCAGCCCCTCCGTGGGCCTCCTTAGGCCCTGACAACTTCACTTTA AATTATTGAAGATGAAAACTTGTCAGAATGTTATGCAACCTTTTTGTTCAAGCAAACTTGATTT TAATTGCCGAGCACATGTTATAAAATAAAAGAACATTTTTTTGTTTTTTTCTTGAAACAACTAG AGCATTCATCTGTCAGCTCTAACACATCGAATTTCAATCTTTTTATCTATTAATATTTGTTATA GCTAAGCTAACTGACTTGATTCTCATTTCTCTTAATCTTTTTGGATATAGTTTCTATCGAGCAG GCAGATACGACAACCTCAAGCGATAACCTTGCCATGGAAAAGATTGGCTTGTTATCACATCCAG AGGAAAACATGGACTTTGAATATGAAGATTTGGAGGTATATGAAGCCTGAACCTAGAAATTAAC ATTGCATTGTCCTGTATCATATTTGTATAATTAAAGCACTTCTCTTATTCATCTCTAATTAAGC AGAATGAAAAGGGCACTGGGGAAGGCCAGCTTGAGCCTGAAAGTGCAACTTCCCTTCCTGTTTT ATGCATAGAGGATGGGAACGCTATCCTGAGATTCTCTGAAATTTTTGGTATCCAAGAGCCTGTA AGAAAAGTGAAGACAGATCACCACAAACGACCAGTGGATAAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.100449056

Conservation Information
Conserved circRNAs	NA
PMCS	0.100449056

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							96781686-96785761(+)
						
						Potential amino acid sequence
						
							MFGNVDDSGDLDADYLDEDAKEHLFALADKLGPSLKDIDLMKSSPAPTDPSEQDYDEKAEDAVD
YEDIDEEYDGPEVEATTEEDNVLSKKDYFSSSTVYASVNSTVSVFDDENYDEEEEPPNDNEPPG
DSAAQNLSSVSIEQADTTTSSDNLAMEKIGLLSHPEENMDFEYEDLENEKGTGEGQLEPESATS
LPVLCIEDGNAILRFSEIFGIQEPVRKVKTDHHKRPVDKDDDDDEDYEEPGGGNHLLGFMFGNV
DDSGDLDADYLDEDAKEHLFALADKLGPSLKDIDLMKSSPAPTDPSEQDYDEKAEDAVDYEDID
EEYDGPEVEATTEEDNVLSKKDYFSSSTVYASVNSTVSVFDDENYDEEEEPPNDNEPPGDSAAQ
NLSSVSIEQADTTTSSDNLAMEKIGLLSHPEENMDFEYEDLENEKGTGEGQLEPESATSLPVLC
IEDGNAILRFSEIFGIQEPVRKVKTDHHKRPVDKDDDDDEDYEEPGGGNHLLGFMFGNVDDSGD
LDADYLDEDAKEHLFALADKLGPSLKDIDLMKSSPAPTDPSEQDYDEKAEDAVDYEDIDEEYDG
PEVEATTEEDNVLSKKDYFSSSTVYASVNSTVSVFDDENYDEEEEPPNDNEPPGDSAAQNLSSV
SIEQADTTTSSDNLAMEKIGLLSHPEENMDFEYEDLENEKGTGEGQLEPESATSLPVLCIEDGN
AILRFSEIFGIQEPVRKVKTDHHKRPVDKDDDDDEDYEEPGGGNHLLGFMFGNVDDSGDLDADY
LDEDAKEHLFALADKLGPSLKDIDLMKSSPAPTDPSEQDYDEKAEDAVDYEDIDEEYDGPEVEA
TTEEDNVLSKKDYFSSSTVYASVNSTVSVFDDENYDEEEEPPNDNEPPGDSAAQNLSSVSIEQA
DTTTSSDNLAMEKIGLLSHPEENMDFEYEDLENEKGTGEGQLEPESATSLPVLCIEDGNAILRF
SEIFGIQEPVRKVKTDHHKRPVDK(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	96781686-96785761(+)
Potential amino acid sequence	MFGNVDDSGDLDADYLDEDAKEHLFALADKLGPSLKDIDLMKSSPAPTDPSEQDYDEKAEDAVD YEDIDEEYDGPEVEATTEEDNVLSKKDYFSSSTVYASVNSTVSVFDDENYDEEEEPPNDNEPPG DSAAQNLSSVSIEQADTTTSSDNLAMEKIGLLSHPEENMDFEYEDLENEKGTGEGQLEPESATS LPVLCIEDGNAILRFSEIFGIQEPVRKVKTDHHKRPVDKDDDDDEDYEEPGGGNHLLGFMFGNV DDSGDLDADYLDEDAKEHLFALADKLGPSLKDIDLMKSSPAPTDPSEQDYDEKAEDAVDYEDID EEYDGPEVEATTEEDNVLSKKDYFSSSTVYASVNSTVSVFDDENYDEEEEPPNDNEPPGDSAAQ NLSSVSIEQADTTTSSDNLAMEKIGLLSHPEENMDFEYEDLENEKGTGEGQLEPESATSLPVLC IEDGNAILRFSEIFGIQEPVRKVKTDHHKRPVDKDDDDDEDYEEPGGGNHLLGFMFGNVDDSGD LDADYLDEDAKEHLFALADKLGPSLKDIDLMKSSPAPTDPSEQDYDEKAEDAVDYEDIDEEYDG PEVEATTEEDNVLSKKDYFSSSTVYASVNSTVSVFDDENYDEEEEPPNDNEPPGDSAAQNLSSV SIEQADTTTSSDNLAMEKIGLLSHPEENMDFEYEDLENEKGTGEGQLEPESATSLPVLCIEDGN AILRFSEIFGIQEPVRKVKTDHHKRPVDKDDDDDEDYEEPGGGNHLLGFMFGNVDDSGDLDADY LDEDAKEHLFALADKLGPSLKDIDLMKSSPAPTDPSEQDYDEKAEDAVDYEDIDEEYDGPEVEA TTEEDNVLSKKDYFSSSTVYASVNSTVSVFDDENYDEEEEPPNDNEPPGDSAAQNLSSVSIEQA DTTTSSDNLAMEKIGLLSHPEENMDFEYEDLENEKGTGEGQLEPESATSLPVLCIEDGNAILRF SEIFGIQEPVRKVKTDHHKRPVDK(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d046579_circ_g.5

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