Plant Circular RNA Database

Detail information of Zm00001d046579_circ_g.13

			
						 General Information
					
						CircRNA Name
						Zm00001d046579_circ_g.13
					
						ID in PlantcircBase
						zma_circ_009992
					
						Alias
						Zm09circ00051, zma_circ_0003002
					
						Organism
						
							Zea mays						
					
						Position
						
							chr9: 96793895-96797627  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI2, find_circ
					
						Parent gene
						
							Zm00001d046579						
					
						Parent gene annotation
						
							Transcription initiation factor TFIID subunit 1
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d046579_circ_g.1 Zm00001d046579_circ_g.2 Zm00001d046579_circ_g.3 Zm00001d046579_circ_g.4 Zm00001d046579_circ_g.5 Zm00001d046579_circ_g.6 Zm00001d046579_circ_g.7 Zm00001d046579_circ_g.8 Zm00001d046579_circ_g.9 Zm00001d046579_circ_g.10 Zm00001d046579_circ_g.11 Zm00001d046579_circ_g.12 Zm00001d046579_circ_g.14 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d046579_T025:5
Zm00001d046579_T008:5
Zm00001d046579_T015:5
Zm00001d046579_T009:5
Zm00001d046579_T023:5
Zm00001d046579_T030:5
Zm00001d046579_T011:5
Zm00001d046579_T006:5
Zm00001d046579_T016:5
Zm00001d046579_T002:5
Zm00001d046579_T019:5
Zm00001d046579_T005:5
Zm00001d046579_T031:5
Zm00001d046579_T003:5
Zm00001d046579_T007:5
Zm00001d046579_T001:5
Zm00001d046579_T024:5
Zm00001d046579_T020:5
Zm00001d046579_T027:5
Zm00001d046579_T004:5
Zm00001d046579_T029:5
Zm00001d046579_T018:5

General Information
CircRNA Name	Zm00001d046579_circ_g.13
ID in PlantcircBase	zma_circ_009992
Alias	Zm09circ00051, zma_circ_0003002
Organism	Zea mays
Position	chr9: 96793895-96797627 JBrowse»
Reference genome	AGPv4.38
Type	ue-circRNA
Identification method	CIRI2, find_circ
Parent gene	Zm00001d046579
Parent gene annotation	Transcription initiation factor TFIID subunit 1
Parent gene strand	+
Alternative splicing	Zm00001d046579_circ_g.1 Zm00001d046579_circ_g.2 Zm00001d046579_circ_g.3 Zm00001d046579_circ_g.4 Zm00001d046579_circ_g.5 Zm00001d046579_circ_g.6 Zm00001d046579_circ_g.7 Zm00001d046579_circ_g.8 Zm00001d046579_circ_g.9 Zm00001d046579_circ_g.10 Zm00001d046579_circ_g.11 Zm00001d046579_circ_g.12 Zm00001d046579_circ_g.14
Support reads	NA
Tissues	leaf, endosperm, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d046579_T025:5 Zm00001d046579_T008:5 Zm00001d046579_T015:5 Zm00001d046579_T009:5 Zm00001d046579_T023:5 Zm00001d046579_T030:5 Zm00001d046579_T011:5 Zm00001d046579_T006:5 Zm00001d046579_T016:5 Zm00001d046579_T002:5 Zm00001d046579_T019:5 Zm00001d046579_T005:5 Zm00001d046579_T031:5 Zm00001d046579_T003:5 Zm00001d046579_T007:5 Zm00001d046579_T001:5 Zm00001d046579_T024:5 Zm00001d046579_T020:5 Zm00001d046579_T027:5 Zm00001d046579_T004:5 Zm00001d046579_T029:5 Zm00001d046579_T018:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGATGAGGCTATTGAGCTTGCTGCTGCATCACATATCGAGAGGGAACTGCAAATCACTAGCTGG
AATCTTACAAGTAATTTCGTCGCTTGTACTAATCAGaattgaagccttctgagaagatcaaatt
gttctgttctgggaaagagcttcaggatgacatctcgttagcaatgcaaaatgtgcgaccaaac
tccattgt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1082
Transcript exons: 96793895-96794132,96795073-96795409,96796179-96796385,96
796489-96796581,96797421-96797627
AATTGAAGCCTTCTGAGAAGATCAAATTGTTCTGTTCTGGGAAAGAGCTTCAGGATGACATCTC
GTTAGCAATGCAAAATGTGCGACCAAACTCCATTGTGCATGCTGTTCGCACTGAAGTGTACCTA
TGGCCAAAAGCACAGAAATTACCTGGTGAGGACAAGCCTCTACGCCCTCCTGGGGCTTTCAGGA
AAAAAACTGACTTGTCTATCAAGGATGGACATGTTTTTTTAATGGAATATTGTGAAGAGAGACC
TTTGCTTCTCTCGAATGCAGGAATGGGAGCCCGTCTCTGTACATATTACCAGAAAACTACCCCT
ACTGATCAGACAGCTGCATCACTGCGAAACAACAGTGATGGACTGGGCACAGTGCTTGCAATTG
ATCCTGCTGATAAATCCCCTTTTCTAGGAGAGATACATTCTGGGTCCCACCAATCTTGTCTTGA
AACAAACATGTATAGATCACCTGTATTTCCCCATAAGGTTGCACCAACTGATTACTTATTAGTT
CGTTCAGCCAAAGGGGCTCTTTCCCTCCGTCGCATTGACAAGCTATATGTTGTTGGCCAACAAG
AACCTCATATGGAAGTCTTTTCACCAGGGACTAAGAACATGCAAAATTATCTTCTGAACCGAGT
TCTTGCATATGTTTATCGTGAGTTTCGTGCTAGAGAGAGGCCTGATGCTATTCCTCAGATTCGA
GCTGACGAGTTACCCATACAAAGTCCTCTGACAGAAGCCATAGTGAAAAAACGATTGAAGCATT
GTGCAGATTTGAAGAAAGGACCAAAGGGGCATTTTTTCTGGACACAGAGACCTGATTTCCGGGT
TCCATCAGAAGAAGAACTGAGGAGATTATTGACGCCAGAAAGTGTTTGCTGTTATGAAAGTATG
CAAGCTGGTTTGTATCGTCTCAAGCGCTTAGGAATTCTGAAGCTTACTCAGCCTGTTGGATTGG
CTTCTGCCATGAATCAGCTTCCTGATGAGGCTATTGAGCTTGCTGCTGCATCACATATCGAGAG
GGAACTGCAAATCACTAGCTGGAATCTTACAAGTAATTTCGTCGCTTGTACTAATCAG
						
					

						Genomic sequence
						
							AATTGAAGCCTTCTGAGAAGATCAAATTGTTCTGTTCTGGGAAAGAGCTTCAGGATGACATCTC
GTTAGCAATGCAAAATGTGCGACCAAACTCCATTGTGCATGCTGTTCGCACTGAAGTGTACCTA
TGGCCAAAAGCACAGAAATTACCTGGTGAGGACAAGCCTCTACGCCCTCCTGGGGCTTTCAGGA
AAAAAACTGACTTGTCTATCAAGGATGGACATGTTTTTTTAATGGAGTAAGTCCAATTTATTCC
CCCTTATTGTATATTGAAGTTATAATTTCAATGAACTTTAATGCATATGACTTTATATAGGCGC
TGATTTTTTGAATGTTAGTTGCTAGTTCAACGAAGTGGTATTACACAACTTTTGATGTGCCATG
GTCTGTTAGTTGAAATTTGGTCATAGATATCTCTTGAATTATTTATGACCTACAAAATTGTAAC
TATAAGAATTCACATTGAAATATGGATTTTTTCTACCAGTTTTGTATCTCATTGAACTCATATA
TAGTCAACCGACTTATTAGCTAGAAGTTACTTCATCACATAGCTGTACTGATAGTGTTGCAAAC
TTTGGTTGAGATTTATAATATTTTATTAATAGTTACTAAGTCACAATTCTATGTACCTTTGAAT
ACTACTCCAACGGATTTTCTATGATTTGATCACATACATCATAGATCCTTATATTAATTTATAG
ACTAAACTTGAACTTAGACAGTCAAATGATGGCTTATATTTTTGGGTGGAGGAATTACAATGTT
TGAACTTTTAGATGATGCACCTTACAGTAATGGAGGGAGTATATGGGAGGTAGCTTCTTGGGTA
GGTATTTCTGCTTGTGAATTGTGATTTGCTTGTTGGTATTGGGACTTTCTATCATGGTAGCACA
TGTGTTATTAACACATGACTGTAGATACTGTGAATAGAGAGCTCTGATACTTTACAACATCAAC
AACTACTACAAAGCCTTTTAGTCCCAAGCAAGTTGGGGTAGGCTAAGAGCTCTGATACTTTACA
GTGATTTTTTTATTCTTTTTACTTCTATTTTGGCCAAGTGCTTATCATTATGTTTATATGTGCA
AGGCTATGTTGGTTATGCACATTGTCAAATTTTGATTATGTTTTTTCGCCACTGTAGTAATTCA
TCTGTTGTTTATTGCCCTGAGTGCAGATATTGTGAAGAGAGACCTTTGCTTCTCTCGAATGCAG
GAATGGGAGCCCGTCTCTGTACATATTACCAGAAAACTACCCCTACTGATCAGACAGCTGCATC
ACTGCGAAACAACAGTGATGGACTGGGCACAGTGCTTGCAATTGATCCTGCTGATAAATCCCCT
TTTCTAGGAGAGATACATTCTGGGTCCCACCAATCTTGTCTTGAAACAAACATGTATAGATCAC
CTGTATTTCCCCATAAGGTTGCACCAACTGATTACTTATTAGTTCGTTCAGCCAAAGGGGCTCT
TTCCCTCCGTCGCATTGACAAGCTATATGTTGTTGGCCAACAAGTAAGCTCTGGTGCCTGAAAT
ACTATGTTCTGTATAAGCAGGATGTGCAATGTTTCCAACCCTTCCCTATCTGAAGTTTTTCATA
TTGTCAAGGATATGATCCCCTCACTGAATTCTCCGCTGTGGTGCATTCCCAAGCTTTGCACTGC
AGACCATGTTCTGAAATATTCATTGCTTAGGTTTAGCTTGTGATTGTTTCTGTGTGGGACCTTT
AGGCTTTACAGCTTTAGTGAACATAGCTGAAACATTGGATATTCCTTTGTTACAGTGGTAGAGA
TAGCTCTCGTCCATCATGTTTTGCATTTATGCTTGGCAGGGAAATTCAATTTCTTTTATTGATA
AAATCTGCTATGAAGTTCAGTAATGTAGTATTGTAGTGTGTTGCATGTTTAGAAGCTTCTTTGG
CGCAGTTTTAGCATGTCATGCATTTGTTGAATGATCCTACACGTTGGCAGTTTGTTGTCAGCAT
GTGAGAACAGAAGTACATGAGAATATCTGAACGTGAGCATTACAAATATGACTGGTATATGGTT
ATTGATTTCTGCGTAAAATTTGAAGAAACTATGTTCTGTATCCACTTTTTTTTCAAACAAATAT
AATACTCCTTGAGTTTTTTGTTTTTTTGTGTCAAGAATACTCCTCGAGTTCTTGCCATTTTCTG
CTGTTGTTAGAACAATACATTGGAAATAAATCATCAGTGTTTAGGAGCTGTTCTGTATTGGAGC
TTTAACGATTTCATCCCTAGGATAATAGTCATGGTTTCTTGCAGGAACCTCATATGGAAGTCTT
TTCACCAGGGACTAAGAACATGCAAAATTATCTTCTGAACCGAGTTCTTGCATATGTTTATCGT
GAGTTTCGTGCTAGAGAGAGGCCTGATGCTATTCCTCAGATTCGAGCTGACGAGTTACCCATAC
AAAGTCCTCTGACAGAAGCCATAGTGAAAAAACGATTGAAGCATTGTGCAGATTTGAAGGTATC
TGTCTATCACACATTTTATTCATAGTTTCTTTATCTGTATATTTTTATTCTGGACTCTTATTCA
ACCATATTTAATGATCTCCTGCACTTCCTTACAGAAAGGACCAAAGGGGCATTTTTTCTGGACA
CAGAGACCTGATTTCCGGGTTCCATCAGAAGAAGAACTGAGGAGATTATTGACGCCAGAAAGTG
TGAGTTTCTGCAAATTATTATTGCCCTCATGTTAATCTCAATCAATTGTTTCTTGTTGACATGT
TTTTTCCACGAAAGGATGGCAAAAGCGTTGCTACAAGTTTTATCAGAAGAAGAAACAGAAAGAA
GTATTGGTCCAGTTCTTTTAGGGAAACCAGGCCCAAAAACCCAACAACATCTCCCCCAAACACA
ACTACTAAAACAACAGAAGTTCTCCAAGGACAAACTCAACACCACTAGCCGCTCAGAAAAACAA
ACAATGAGCCAACTAAAATGAAATGGCCAAACCACTAAACAACTCATACTCCTGCTAACCAACT
AAGCAACTATCACAACTAAGAACCAAACATCTACCAAGACTAAATGGCACCAACTTTGACAACA
ACTATCATGCTTCAAAGGTCTTGCATGCTGTCGCTCCAAACCTTTTCAACGCTCCTTTCACTAA
AAACCTGTCAAGTCTTTTGTCAATCGCCAATACAACAACAGAACTGGATGACAAGCTTTATCTT
TTGAAGAAATGCTTTATTTTGCACGTCGTGGAAATGCGAGTGCTTATTACGCTGTGCTGGCTTA
TATATGGACCACAAGCGCTGGTTATTATGCCATACCCACATTTCCAAATCTATAGGATGAAATG
TCTTTAAAAATTGGGTCATCAGAGTAAGTTGACTGAGAATATATTTTTCTTATAGAAAGTTCTA
TTGAAAGCACCAATACCTAAATAATGAGGTTTATTCTTTGAAGGTTGCCTTACCTTCTTGACTT
GGTGTTTAATAACAGTTCTCTTTTCAATCCGAAAATATGACGACGACTCAACTAAAATATCATT
ATCCAGGTTTGCTGTTATGAAAGTATGCAAGCTGGTTTGTATCGTCTCAAGCGCTTAGGAATTC
TGAAGCTTACTCAGCCTGTTGGATTGGCTTCTGCCATGAATCAGCTTCCTGATGAGGCTATTGA
GCTTGCTGCTGCATCACATATCGAGAGGGAACTGCAAATCACTAGCTGGAATCTTACAAGTAAT
TTCGTCGCTTGTACTAATCAG
						
					

			
		

Sequences
Splice junction sequence	TGATGAGGCTATTGAGCTTGCTGCTGCATCACATATCGAGAGGGAACTGCAAATCACTAGCTGG AATCTTACAAGTAATTTCGTCGCTTGTACTAATCAGaattgaagccttctgagaagatcaaatt gttctgttctgggaaagagcttcaggatgacatctcgttagcaatgcaaaatgtgcgaccaaac tccattgt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1082 Transcript exons: 96793895-96794132,96795073-96795409,96796179-96796385,96 796489-96796581,96797421-96797627 AATTGAAGCCTTCTGAGAAGATCAAATTGTTCTGTTCTGGGAAAGAGCTTCAGGATGACATCTC GTTAGCAATGCAAAATGTGCGACCAAACTCCATTGTGCATGCTGTTCGCACTGAAGTGTACCTA TGGCCAAAAGCACAGAAATTACCTGGTGAGGACAAGCCTCTACGCCCTCCTGGGGCTTTCAGGA AAAAAACTGACTTGTCTATCAAGGATGGACATGTTTTTTTAATGGAATATTGTGAAGAGAGACC TTTGCTTCTCTCGAATGCAGGAATGGGAGCCCGTCTCTGTACATATTACCAGAAAACTACCCCT ACTGATCAGACAGCTGCATCACTGCGAAACAACAGTGATGGACTGGGCACAGTGCTTGCAATTG ATCCTGCTGATAAATCCCCTTTTCTAGGAGAGATACATTCTGGGTCCCACCAATCTTGTCTTGA AACAAACATGTATAGATCACCTGTATTTCCCCATAAGGTTGCACCAACTGATTACTTATTAGTT CGTTCAGCCAAAGGGGCTCTTTCCCTCCGTCGCATTGACAAGCTATATGTTGTTGGCCAACAAG AACCTCATATGGAAGTCTTTTCACCAGGGACTAAGAACATGCAAAATTATCTTCTGAACCGAGT TCTTGCATATGTTTATCGTGAGTTTCGTGCTAGAGAGAGGCCTGATGCTATTCCTCAGATTCGA GCTGACGAGTTACCCATACAAAGTCCTCTGACAGAAGCCATAGTGAAAAAACGATTGAAGCATT GTGCAGATTTGAAGAAAGGACCAAAGGGGCATTTTTTCTGGACACAGAGACCTGATTTCCGGGT TCCATCAGAAGAAGAACTGAGGAGATTATTGACGCCAGAAAGTGTTTGCTGTTATGAAAGTATG CAAGCTGGTTTGTATCGTCTCAAGCGCTTAGGAATTCTGAAGCTTACTCAGCCTGTTGGATTGG CTTCTGCCATGAATCAGCTTCCTGATGAGGCTATTGAGCTTGCTGCTGCATCACATATCGAGAG GGAACTGCAAATCACTAGCTGGAATCTTACAAGTAATTTCGTCGCTTGTACTAATCAG
Genomic sequence	AATTGAAGCCTTCTGAGAAGATCAAATTGTTCTGTTCTGGGAAAGAGCTTCAGGATGACATCTC GTTAGCAATGCAAAATGTGCGACCAAACTCCATTGTGCATGCTGTTCGCACTGAAGTGTACCTA TGGCCAAAAGCACAGAAATTACCTGGTGAGGACAAGCCTCTACGCCCTCCTGGGGCTTTCAGGA AAAAAACTGACTTGTCTATCAAGGATGGACATGTTTTTTTAATGGAGTAAGTCCAATTTATTCC CCCTTATTGTATATTGAAGTTATAATTTCAATGAACTTTAATGCATATGACTTTATATAGGCGC TGATTTTTTGAATGTTAGTTGCTAGTTCAACGAAGTGGTATTACACAACTTTTGATGTGCCATG GTCTGTTAGTTGAAATTTGGTCATAGATATCTCTTGAATTATTTATGACCTACAAAATTGTAAC TATAAGAATTCACATTGAAATATGGATTTTTTCTACCAGTTTTGTATCTCATTGAACTCATATA TAGTCAACCGACTTATTAGCTAGAAGTTACTTCATCACATAGCTGTACTGATAGTGTTGCAAAC TTTGGTTGAGATTTATAATATTTTATTAATAGTTACTAAGTCACAATTCTATGTACCTTTGAAT ACTACTCCAACGGATTTTCTATGATTTGATCACATACATCATAGATCCTTATATTAATTTATAG ACTAAACTTGAACTTAGACAGTCAAATGATGGCTTATATTTTTGGGTGGAGGAATTACAATGTT TGAACTTTTAGATGATGCACCTTACAGTAATGGAGGGAGTATATGGGAGGTAGCTTCTTGGGTA GGTATTTCTGCTTGTGAATTGTGATTTGCTTGTTGGTATTGGGACTTTCTATCATGGTAGCACA TGTGTTATTAACACATGACTGTAGATACTGTGAATAGAGAGCTCTGATACTTTACAACATCAAC AACTACTACAAAGCCTTTTAGTCCCAAGCAAGTTGGGGTAGGCTAAGAGCTCTGATACTTTACA GTGATTTTTTTATTCTTTTTACTTCTATTTTGGCCAAGTGCTTATCATTATGTTTATATGTGCA AGGCTATGTTGGTTATGCACATTGTCAAATTTTGATTATGTTTTTTCGCCACTGTAGTAATTCA TCTGTTGTTTATTGCCCTGAGTGCAGATATTGTGAAGAGAGACCTTTGCTTCTCTCGAATGCAG GAATGGGAGCCCGTCTCTGTACATATTACCAGAAAACTACCCCTACTGATCAGACAGCTGCATC ACTGCGAAACAACAGTGATGGACTGGGCACAGTGCTTGCAATTGATCCTGCTGATAAATCCCCT TTTCTAGGAGAGATACATTCTGGGTCCCACCAATCTTGTCTTGAAACAAACATGTATAGATCAC CTGTATTTCCCCATAAGGTTGCACCAACTGATTACTTATTAGTTCGTTCAGCCAAAGGGGCTCT TTCCCTCCGTCGCATTGACAAGCTATATGTTGTTGGCCAACAAGTAAGCTCTGGTGCCTGAAAT ACTATGTTCTGTATAAGCAGGATGTGCAATGTTTCCAACCCTTCCCTATCTGAAGTTTTTCATA TTGTCAAGGATATGATCCCCTCACTGAATTCTCCGCTGTGGTGCATTCCCAAGCTTTGCACTGC AGACCATGTTCTGAAATATTCATTGCTTAGGTTTAGCTTGTGATTGTTTCTGTGTGGGACCTTT AGGCTTTACAGCTTTAGTGAACATAGCTGAAACATTGGATATTCCTTTGTTACAGTGGTAGAGA TAGCTCTCGTCCATCATGTTTTGCATTTATGCTTGGCAGGGAAATTCAATTTCTTTTATTGATA AAATCTGCTATGAAGTTCAGTAATGTAGTATTGTAGTGTGTTGCATGTTTAGAAGCTTCTTTGG CGCAGTTTTAGCATGTCATGCATTTGTTGAATGATCCTACACGTTGGCAGTTTGTTGTCAGCAT GTGAGAACAGAAGTACATGAGAATATCTGAACGTGAGCATTACAAATATGACTGGTATATGGTT ATTGATTTCTGCGTAAAATTTGAAGAAACTATGTTCTGTATCCACTTTTTTTTCAAACAAATAT AATACTCCTTGAGTTTTTTGTTTTTTTGTGTCAAGAATACTCCTCGAGTTCTTGCCATTTTCTG CTGTTGTTAGAACAATACATTGGAAATAAATCATCAGTGTTTAGGAGCTGTTCTGTATTGGAGC TTTAACGATTTCATCCCTAGGATAATAGTCATGGTTTCTTGCAGGAACCTCATATGGAAGTCTT TTCACCAGGGACTAAGAACATGCAAAATTATCTTCTGAACCGAGTTCTTGCATATGTTTATCGT GAGTTTCGTGCTAGAGAGAGGCCTGATGCTATTCCTCAGATTCGAGCTGACGAGTTACCCATAC AAAGTCCTCTGACAGAAGCCATAGTGAAAAAACGATTGAAGCATTGTGCAGATTTGAAGGTATC TGTCTATCACACATTTTATTCATAGTTTCTTTATCTGTATATTTTTATTCTGGACTCTTATTCA ACCATATTTAATGATCTCCTGCACTTCCTTACAGAAAGGACCAAAGGGGCATTTTTTCTGGACA CAGAGACCTGATTTCCGGGTTCCATCAGAAGAAGAACTGAGGAGATTATTGACGCCAGAAAGTG TGAGTTTCTGCAAATTATTATTGCCCTCATGTTAATCTCAATCAATTGTTTCTTGTTGACATGT TTTTTCCACGAAAGGATGGCAAAAGCGTTGCTACAAGTTTTATCAGAAGAAGAAACAGAAAGAA GTATTGGTCCAGTTCTTTTAGGGAAACCAGGCCCAAAAACCCAACAACATCTCCCCCAAACACA ACTACTAAAACAACAGAAGTTCTCCAAGGACAAACTCAACACCACTAGCCGCTCAGAAAAACAA ACAATGAGCCAACTAAAATGAAATGGCCAAACCACTAAACAACTCATACTCCTGCTAACCAACT AAGCAACTATCACAACTAAGAACCAAACATCTACCAAGACTAAATGGCACCAACTTTGACAACA ACTATCATGCTTCAAAGGTCTTGCATGCTGTCGCTCCAAACCTTTTCAACGCTCCTTTCACTAA AAACCTGTCAAGTCTTTTGTCAATCGCCAATACAACAACAGAACTGGATGACAAGCTTTATCTT TTGAAGAAATGCTTTATTTTGCACGTCGTGGAAATGCGAGTGCTTATTACGCTGTGCTGGCTTA TATATGGACCACAAGCGCTGGTTATTATGCCATACCCACATTTCCAAATCTATAGGATGAAATG TCTTTAAAAATTGGGTCATCAGAGTAAGTTGACTGAGAATATATTTTTCTTATAGAAAGTTCTA TTGAAAGCACCAATACCTAAATAATGAGGTTTATTCTTTGAAGGTTGCCTTACCTTCTTGACTT GGTGTTTAATAACAGTTCTCTTTTCAATCCGAAAATATGACGACGACTCAACTAAAATATCATT ATCCAGGTTTGCTGTTATGAAAGTATGCAAGCTGGTTTGTATCGTCTCAAGCGCTTAGGAATTC TGAAGCTTACTCAGCCTGTTGGATTGGCTTCTGCCATGAATCAGCTTCCTGATGAGGCTATTGA GCTTGCTGCTGCATCACATATCGAGAGGGAACTGCAAATCACTAGCTGGAATCTTACAAGTAAT TTCGTCGCTTGTACTAATCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.148074384

Conservation Information
Conserved circRNAs	NA
PMCS	0.148074384

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							96797531-96793907(+)
96793967-96793897(+)
						
						Potential amino acid sequence
						
							MRLLSLLLHHISRGNCKSLAGILQVISSLVLIRIEAF*(+)
MQNVRPNSIVHAVRTEVYLWPKAQKLPGEDKPLRPPGAFRKKTDLSIKDGHVFLMEYCEERPLL
LSNAGMGARLCTYYQKTTPTDQTAASLRNNSDGLGTVLAIDPADKSPFLGEIHSGSHQSCLETN
MYRSPVFPHKVAPTDYLLVRSAKGALSLRRIDKLYVVGQQEPHMEVFSPGTKNMQNYLLNRVLA
YVYREFRARERPDAIPQIRADELPIQSPLTEAIVKKRLKHCADLKKGPKGHFFWTQRPDFRVPS
EEELRRLLTPESVCCYESMQAGLYRLKRLGILKLTQPVGLASAMNQLPDEAIELAAASHIEREL
QITSWNLTSNFVACTNQN*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	96797531-96793907(+) 96793967-96793897(+)
Potential amino acid sequence	MRLLSLLLHHISRGNCKSLAGILQVISSLVLIRIEAF(+) MQNVRPNSIVHAVRTEVYLWPKAQKLPGEDKPLRPPGAFRKKTDLSIKDGHVFLMEYCEERPLL LSNAGMGARLCTYYQKTTPTDQTAASLRNNSDGLGTVLAIDPADKSPFLGEIHSGSHQSCLETN MYRSPVFPHKVAPTDYLLVRSAKGALSLRRIDKLYVVGQQEPHMEVFSPGTKNMQNYLLNRVLA YVYREFRARERPDAIPQIRADELPIQSPLTEAIVKKRLKHCADLKKGPKGHFFWTQRPDFRVPS EEELRRLLTPESVCCYESMQAGLYRLKRLGILKLTQPVGLASAMNQLPDEAIELAAASHIEREL QITSWNLTSNFVACTNQN(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020; Ma et al., 2021b

circRNA

Detail information of Zm00001d046579_circ_g.13

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