Plant Circular RNA Database

Detail information of Os11g0286800_circ_g.11

			
						 General Information
					
						CircRNA Name
						Os11g0286800_circ_g.11
					
						ID in PlantcircBase
						osa_circ_009089
					
						Alias
						Os_ciR1589
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr11: 10360941-10367476  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, CIRI, KNIFE, PcircRNA_finder, circRNA_finder, find_circ
					
						Parent gene
						
							Os11g0286800						
					
						Parent gene annotation
						
							Squalene cyclase domain containing protein. (Os11t0286800-01);Si
milar to Cycloartenol synthase. (Os11t0286800-02);Similar to Cyc
loartenol synthase. (Os11t0286800-03);Similar to Cycloartenol sy
nthase. (Os11t0286800-04)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os11g0286500_circ_ag.1 Os11g0286500_circ_ag.2 Os11g0286800_circ_g.1 Os11g0286800_circ_g.2 Os11g0286800_circ_g.3 Os11g0286800_circ_g.4 Os11g0286800_circ_g.5 Os11g0286800_circ_g.6 Os11g0286800_circ_g.7 Os11g0286800_circ_g.8 Os11g0286800_circ_g.9 Os11g0286800_circ_g.10 Os11g0286800_circ_g.12 Os11g0286800_circ_g.13 Os11g0286800_circ_g.14 Os11g0286800_circ_g.15 						
					
						Support reads
						9/9
					
						Tissues
						root/shoot, root, seed
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os11t0286800-02:7
Os11t0286800-03:6
Os11t0286800-01:7
Os11t0286800-04:3

General Information
CircRNA Name	Os11g0286800_circ_g.11
ID in PlantcircBase	osa_circ_009089
Alias	Os_ciR1589
Organism	Oryza sativa
Position	chr11: 10360941-10367476 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, CIRI, KNIFE, PcircRNA_finder, circRNA_finder, find_circ
Parent gene	Os11g0286800
Parent gene annotation	Squalene cyclase domain containing protein. (Os11t0286800-01);Si milar to Cycloartenol synthase. (Os11t0286800-02);Similar to Cyc loartenol synthase. (Os11t0286800-03);Similar to Cycloartenol sy nthase. (Os11t0286800-04)
Parent gene strand	-
Alternative splicing	Os11g0286500_circ_ag.1 Os11g0286500_circ_ag.2 Os11g0286800_circ_g.1 Os11g0286800_circ_g.2 Os11g0286800_circ_g.3 Os11g0286800_circ_g.4 Os11g0286800_circ_g.5 Os11g0286800_circ_g.6 Os11g0286800_circ_g.7 Os11g0286800_circ_g.8 Os11g0286800_circ_g.9 Os11g0286800_circ_g.10 Os11g0286800_circ_g.12 Os11g0286800_circ_g.13 Os11g0286800_circ_g.14 Os11g0286800_circ_g.15
Support reads	9/9
Tissues	root/shoot, root, seed
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os11t0286800-02:7 Os11t0286800-03:6 Os11t0286800-01:7 Os11t0286800-04:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CACGTCTTAAAGACGTTAATAGAACTTCTTCTGTGACTTCTGAACTGTCTTTAAGATTGCTTAC
TTCATGTTTACTGTAAACTTGGTTCTCTTTTGCAAActttgacttcattccatcttctgcaagc
cataggaaatcatgaatccttggaacgtgtcgtctgaatgcattggagttcggattttctatcc
agcagcaa

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1026
Transcript exons: 10360941-10361054,10362181-10362369,10364108-10364274,10
364869-10364953,10365216-10365410,10365493-10365582,1036
7291-10367476
CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGTGTCGTCTG
AATGCATTGGAGTTCGGATTTTCTATCCAGCAGCAAATCATATTTAATACCTTGTTAATTGGGC
ATAAACCCACATAATTGCTGTTTTCATCTTCATAGTGAATATGATCCATGAGGTTGGTCAAAGC
TCTTTTTCTTAGCTTGTTCATTGGCCACATATTAAATAGTGGTTCCATAAATTTATGTAAAGAA
GCCATAGCAATGTTTTGGAACCACGAAGGAGGATAAATAATGTCGTCCTTGCAACAAGAAATGC
GAGCATTGTTCCAATTGATCTTGTTGTATGGTACATCATAGAGCTCTTCTCTTAGTGCCAGTAT
AGTTGGAGTTATTGGCCCAATAAATCTTTTTGCATATATATAAGACATTGGCATATAAACCATC
CGGCAAAAGCACCAAAATCTTCCTGGATGAATGGGAAGAAAATGTGGAAGCAACCATAGTTCTG
GAATAATTGGATTGTTCCCTGACCAATCGTAAACACCAATTACCGAGAGATATATCTTTGCCCA
TTGTGGTGCTACAGTTGCACTGCCATGAGACAGAATCCAGGCACGCCCTTTTGATAATCCATCA
TTGTGTTCATCCAGTACCTCCCCTAAGAGCCTTAAGGTAGCATAGTTAACACATGAGCCAAACA
TGGAGCTTGGGCCTAAAGTATGTGTACTCCAACCCCCATCTTCATTCTGAATGTTGTAGATGTA
GCGGCATATCTCACGTATATGCTCAGATGATAAGACATCGTTTAGTGACTTAGTCACATGTAAG
GCAAATATCATGAGCGGCAGAATGAACAAAATCCCGCTGTAACCACCAGGCCAATACCCATCTG
GTGCTTGCAAAGAGGAATATTGATCAAGAACACGTCTTAAAGACGTTAATAGAACTTCTTCTGT
GACTTCTGAACTGTCTTTAAGATTGCTTACTTCATGTTTACTGTAAACTTGGTTCTCTTTTGCA
AA
Transcript length: 216
Transcript exons: 10360941-10360995,10364108-10364135,10367344-10367476
CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGCTTGCAACA
AGAAATGCGAGCATTGTTCCTGGTGCTTGCAAAGAGGAATATTGATCAAGAACACGTCTTAAAG
ACGTTAATAGAACTTCTTCTGTGACTTCTGAACTGTCTTTAAGATTGCTTACTTCATGTTTACT
GTAAACTTGGTTCTCTTTTGCAAA
Transcript length: 229
Transcript exons: 10360941-10361052,10367360-10367476
CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGTGTCGTCTG
AATGCATTGGAGTTCGGATTTTCTATCCAGCAGCAAATCATATTTAATGGAATATTGATCAAGA
ACACGTCTTAAAGACGTTAATAGAACTTCTTCTGTGACTTCTGAACTGTCTTTAAGATTGCTTA
CTTCATGTTTACTGTAAACTTGGTTCTCTTTTGCAAA
Transcript length: 255
Transcript exons: 10360941-10361046,10367328-10367476
CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGTGTCGTCTG
AATGCATTGGAGTTCGGATTTTCTATCCAGCAGCAAATCATACCAGGCCAATACCCATCTGGTG
CTTGCAAAGAGGAATATTGATCAAGAACACGTCTTAAAGACGTTAATAGAACTTCTTCTGTGAC
TTCTGAACTGTCTTTAAGATTGCTTACTTCATGTTTACTGTAAACTTGGTTCTCTTTTGCAAA
Transcript length: 299
Transcript exons: 10360941-10361034,10364108-10364195,10367360-10367476
CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGTGTCGTCTG
AATGCATTGGAGTTCGGATTTTCTATCCAGCTTGCAACAAGAAATGCGAGCATTGTTCCAATTG
ATCTTGTTGTATGGTACATCATAGAGCTCTTCTCTTAGTGCCAGTATAGTTGGAGGAATATTGA
TCAAGAACACGTCTTAAAGACGTTAATAGAACTTCTTCTGTGACTTCTGAACTGTCTTTAAGAT
TGCTTACTTCATGTTTACTGTAAACTTGGTTCTCTTTTGCAAA
Transcript length: 337
Transcript exons: 10360941-10361042,10364108-10364193,10367328-10367476
CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGTGTCGTCTG
AATGCATTGGAGTTCGGATTTTCTATCCAGCAGCAAATCTTGCAACAAGAAATGCGAGCATTGT
TCCAATTGATCTTGTTGTATGGTACATCATAGAGCTCTTCTCTTAGTGCCAGTATAGTTGCCAG
GCCAATACCCATCTGGTGCTTGCAAAGAGGAATATTGATCAAGAACACGTCTTAAAGACGTTAA
TAGAACTTCTTCTGTGACTTCTGAACTGTCTTTAAGATTGCTTACTTCATGTTTACTGTAAACT
TGGTTCTCTTTTGCAAA
Transcript length: 372
Transcript exons: 10360941-10360997,10364108-10364238,10367293-10367476
CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGTGCTTGCAA
CAAGAAATGCGAGCATTGTTCCAATTGATCTTGTTGTATGGTACATCATAGAGCTCTTCTCTTA
GTGCCAGTATAGTTGGAGTTATTGGCCCAATAAATCTTTTTGCATATATATAAGACATTGTGAG
CGGCAGAATGAACAAAATCCCGCTGTAACCACCAGGCCAATACCCATCTGGTGCTTGCAAAGAG
GAATATTGATCAAGAACACGTCTTAAAGACGTTAATAGAACTTCTTCTGTGACTTCTGAACTGT
CTTTAAGATTGCTTACTTCATGTTTACTGTAAACTTGGTTCTCTTTTGCAAA
Transcript length: 393
Transcript exons: 10360941-10361026,10364108-10364193,10365502-10365584,10
367339-10367476
CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGTGTCGTCTG
AATGCATTGGAGTTCGGATTTTCTTGCAACAAGAAATGCGAGCATTGTTCCAATTGATCTTGTT
GTATGGTACATCATAGAGCTCTTCTCTTAGTGCCAGTATAGTTGGTAGATGTAGCGGCATATCT
CACGTATATGCTCAGATGATAAGACATCGTTTAGTGACTTAGTCACATGTAAGGCAAATATCTC
CCATCTGGTGCTTGCAAAGAGGAATATTGATCAAGAACACGTCTTAAAGACGTTAATAGAACTT
CTTCTGTGACTTCTGAACTGTCTTTAAGATTGCTTACTTCATGTTTACTGTAAACTTGGTTCTC
TTTTGCAAA
Transcript length: 837
Transcript exons: 10360941-10361054,10364108-10364274,10364869-10364953,10
365216-10365410,10365493-10365582,10367291-10367476
CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGTGTCGTCTG
AATGCATTGGAGTTCGGATTTTCTATCCAGCAGCAAATCATATTTAATACCTTGCAACAAGAAA
TGCGAGCATTGTTCCAATTGATCTTGTTGTATGGTACATCATAGAGCTCTTCTCTTAGTGCCAG
TATAGTTGGAGTTATTGGCCCAATAAATCTTTTTGCATATATATAAGACATTGGCATATAAACC
ATCCGGCAAAAGCACCAAAATCTTCCTGGATGAATGGGAAGAAAATGTGGAAGCAACCATAGTT
CTGGAATAATTGGATTGTTCCCTGACCAATCGTAAACACCAATTACCGAGAGATATATCTTTGC
CCATTGTGGTGCTACAGTTGCACTGCCATGAGACAGAATCCAGGCACGCCCTTTTGATAATCCA
TCATTGTGTTCATCCAGTACCTCCCCTAAGAGCCTTAAGGTAGCATAGTTAACACATGAGCCAA
ACATGGAGCTTGGGCCTAAAGTATGTGTACTCCAACCCCCATCTTCATTCTGAATGTTGTAGAT
GTAGCGGCATATCTCACGTATATGCTCAGATGATAAGACATCGTTTAGTGACTTAGTCACATGT
AAGGCAAATATCATGAGCGGCAGAATGAACAAAATCCCGCTGTAACCACCAGGCCAATACCCAT
CTGGTGCTTGCAAAGAGGAATATTGATCAAGAACACGTCTTAAAGACGTTAATAGAACTTCTTC
TGTGACTTCTGAACTGTCTTTAAGATTGCTTACTTCATGTTTACTGTAAACTTGGTTCTCTTTT
GCAAA
						
					

						Genomic sequence
						
							TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.						
					

			
		

Sequences
Splice junction sequence	CACGTCTTAAAGACGTTAATAGAACTTCTTCTGTGACTTCTGAACTGTCTTTAAGATTGCTTAC TTCATGTTTACTGTAAACTTGGTTCTCTTTTGCAAActttgacttcattccatcttctgcaagc cataggaaatcatgaatccttggaacgtgtcgtctgaatgcattggagttcggattttctatcc agcagcaa
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1026 Transcript exons: 10360941-10361054,10362181-10362369,10364108-10364274,10 364869-10364953,10365216-10365410,10365493-10365582,1036 7291-10367476 CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGTGTCGTCTG AATGCATTGGAGTTCGGATTTTCTATCCAGCAGCAAATCATATTTAATACCTTGTTAATTGGGC ATAAACCCACATAATTGCTGTTTTCATCTTCATAGTGAATATGATCCATGAGGTTGGTCAAAGC TCTTTTTCTTAGCTTGTTCATTGGCCACATATTAAATAGTGGTTCCATAAATTTATGTAAAGAA GCCATAGCAATGTTTTGGAACCACGAAGGAGGATAAATAATGTCGTCCTTGCAACAAGAAATGC GAGCATTGTTCCAATTGATCTTGTTGTATGGTACATCATAGAGCTCTTCTCTTAGTGCCAGTAT AGTTGGAGTTATTGGCCCAATAAATCTTTTTGCATATATATAAGACATTGGCATATAAACCATC CGGCAAAAGCACCAAAATCTTCCTGGATGAATGGGAAGAAAATGTGGAAGCAACCATAGTTCTG GAATAATTGGATTGTTCCCTGACCAATCGTAAACACCAATTACCGAGAGATATATCTTTGCCCA TTGTGGTGCTACAGTTGCACTGCCATGAGACAGAATCCAGGCACGCCCTTTTGATAATCCATCA TTGTGTTCATCCAGTACCTCCCCTAAGAGCCTTAAGGTAGCATAGTTAACACATGAGCCAAACA TGGAGCTTGGGCCTAAAGTATGTGTACTCCAACCCCCATCTTCATTCTGAATGTTGTAGATGTA GCGGCATATCTCACGTATATGCTCAGATGATAAGACATCGTTTAGTGACTTAGTCACATGTAAG GCAAATATCATGAGCGGCAGAATGAACAAAATCCCGCTGTAACCACCAGGCCAATACCCATCTG GTGCTTGCAAAGAGGAATATTGATCAAGAACACGTCTTAAAGACGTTAATAGAACTTCTTCTGT GACTTCTGAACTGTCTTTAAGATTGCTTACTTCATGTTTACTGTAAACTTGGTTCTCTTTTGCA AA Transcript length: 216 Transcript exons: 10360941-10360995,10364108-10364135,10367344-10367476 CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGCTTGCAACA AGAAATGCGAGCATTGTTCCTGGTGCTTGCAAAGAGGAATATTGATCAAGAACACGTCTTAAAG ACGTTAATAGAACTTCTTCTGTGACTTCTGAACTGTCTTTAAGATTGCTTACTTCATGTTTACT GTAAACTTGGTTCTCTTTTGCAAA Transcript length: 229 Transcript exons: 10360941-10361052,10367360-10367476 CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGTGTCGTCTG AATGCATTGGAGTTCGGATTTTCTATCCAGCAGCAAATCATATTTAATGGAATATTGATCAAGA ACACGTCTTAAAGACGTTAATAGAACTTCTTCTGTGACTTCTGAACTGTCTTTAAGATTGCTTA CTTCATGTTTACTGTAAACTTGGTTCTCTTTTGCAAA Transcript length: 255 Transcript exons: 10360941-10361046,10367328-10367476 CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGTGTCGTCTG AATGCATTGGAGTTCGGATTTTCTATCCAGCAGCAAATCATACCAGGCCAATACCCATCTGGTG CTTGCAAAGAGGAATATTGATCAAGAACACGTCTTAAAGACGTTAATAGAACTTCTTCTGTGAC TTCTGAACTGTCTTTAAGATTGCTTACTTCATGTTTACTGTAAACTTGGTTCTCTTTTGCAAA Transcript length: 299 Transcript exons: 10360941-10361034,10364108-10364195,10367360-10367476 CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGTGTCGTCTG AATGCATTGGAGTTCGGATTTTCTATCCAGCTTGCAACAAGAAATGCGAGCATTGTTCCAATTG ATCTTGTTGTATGGTACATCATAGAGCTCTTCTCTTAGTGCCAGTATAGTTGGAGGAATATTGA TCAAGAACACGTCTTAAAGACGTTAATAGAACTTCTTCTGTGACTTCTGAACTGTCTTTAAGAT TGCTTACTTCATGTTTACTGTAAACTTGGTTCTCTTTTGCAAA Transcript length: 337 Transcript exons: 10360941-10361042,10364108-10364193,10367328-10367476 CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGTGTCGTCTG AATGCATTGGAGTTCGGATTTTCTATCCAGCAGCAAATCTTGCAACAAGAAATGCGAGCATTGT TCCAATTGATCTTGTTGTATGGTACATCATAGAGCTCTTCTCTTAGTGCCAGTATAGTTGCCAG GCCAATACCCATCTGGTGCTTGCAAAGAGGAATATTGATCAAGAACACGTCTTAAAGACGTTAA TAGAACTTCTTCTGTGACTTCTGAACTGTCTTTAAGATTGCTTACTTCATGTTTACTGTAAACT TGGTTCTCTTTTGCAAA Transcript length: 372 Transcript exons: 10360941-10360997,10364108-10364238,10367293-10367476 CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGTGCTTGCAA CAAGAAATGCGAGCATTGTTCCAATTGATCTTGTTGTATGGTACATCATAGAGCTCTTCTCTTA GTGCCAGTATAGTTGGAGTTATTGGCCCAATAAATCTTTTTGCATATATATAAGACATTGTGAG CGGCAGAATGAACAAAATCCCGCTGTAACCACCAGGCCAATACCCATCTGGTGCTTGCAAAGAG GAATATTGATCAAGAACACGTCTTAAAGACGTTAATAGAACTTCTTCTGTGACTTCTGAACTGT CTTTAAGATTGCTTACTTCATGTTTACTGTAAACTTGGTTCTCTTTTGCAAA Transcript length: 393 Transcript exons: 10360941-10361026,10364108-10364193,10365502-10365584,10 367339-10367476 CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGTGTCGTCTG AATGCATTGGAGTTCGGATTTTCTTGCAACAAGAAATGCGAGCATTGTTCCAATTGATCTTGTT GTATGGTACATCATAGAGCTCTTCTCTTAGTGCCAGTATAGTTGGTAGATGTAGCGGCATATCT CACGTATATGCTCAGATGATAAGACATCGTTTAGTGACTTAGTCACATGTAAGGCAAATATCTC CCATCTGGTGCTTGCAAAGAGGAATATTGATCAAGAACACGTCTTAAAGACGTTAATAGAACTT CTTCTGTGACTTCTGAACTGTCTTTAAGATTGCTTACTTCATGTTTACTGTAAACTTGGTTCTC TTTTGCAAA Transcript length: 837 Transcript exons: 10360941-10361054,10364108-10364274,10364869-10364953,10 365216-10365410,10365493-10365582,10367291-10367476 CTTTGACTTCATTCCATCTTCTGCAAGCCATAGGAAATCATGAATCCTTGGAACGTGTCGTCTG AATGCATTGGAGTTCGGATTTTCTATCCAGCAGCAAATCATATTTAATACCTTGCAACAAGAAA TGCGAGCATTGTTCCAATTGATCTTGTTGTATGGTACATCATAGAGCTCTTCTCTTAGTGCCAG TATAGTTGGAGTTATTGGCCCAATAAATCTTTTTGCATATATATAAGACATTGGCATATAAACC ATCCGGCAAAAGCACCAAAATCTTCCTGGATGAATGGGAAGAAAATGTGGAAGCAACCATAGTT CTGGAATAATTGGATTGTTCCCTGACCAATCGTAAACACCAATTACCGAGAGATATATCTTTGC CCATTGTGGTGCTACAGTTGCACTGCCATGAGACAGAATCCAGGCACGCCCTTTTGATAATCCA TCATTGTGTTCATCCAGTACCTCCCCTAAGAGCCTTAAGGTAGCATAGTTAACACATGAGCCAA ACATGGAGCTTGGGCCTAAAGTATGTGTACTCCAACCCCCATCTTCATTCTGAATGTTGTAGAT GTAGCGGCATATCTCACGTATATGCTCAGATGATAAGACATCGTTTAGTGACTTAGTCACATGT AAGGCAAATATCATGAGCGGCAGAATGAACAAAATCCCGCTGTAACCACCAGGCCAATACCCAT CTGGTGCTTGCAAAGAGGAATATTGATCAAGAACACGTCTTAAAGACGTTAATAGAACTTCTTC TGTGACTTCTGAACTGTCTTTAAGATTGCTTACTTCATGTTTACTGTAAACTTGGTTCTCTTTT GCAAA
Genomic sequence	TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.358212324

Conservation Information
Conserved circRNAs	NA
PMCS	0.358212324

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							10367295-10360943(-)
						
						Potential amino acid sequence
						
							MIFALHVTKSLNDVLSSEHIREICRYIYNIQNEDGGWSTHTLGPSSMFGSCVNYATLRLLGEVL
DEHNDGLSKGRAWILSHGSATVAPQWAKIYLSVIGVYDWSGNNPIIPELWLLPHFLPIHPGRFW
CFCRMVYMPMSYIYAKRFIGPITPTILALREELYDVPYNKINWNNARISCCKVLNMICCWIENP
NSNAFRRHVPRIHDFLWLAEDGMKSKFAKENQVYSKHEVSNLKDSSEVTEEVLLTSLRRVLDQY
SSLQAPDGYWPGGYSGILFILPLMIFALHVTKSLNDVLSSEHIREICRYIYNIQNEDGGWSTHT
LGPSSMFGSCVNYATLRLLGEVLDEHNDGLSKGRAWILSHGSATVAPQWAKIYLSVIGVYDWSG
NNPIIPELWLLPHFLPIHPGRFWCFCRMVYMPMSYIYAKRFIGPITPTILALREELYDVPYNKI
NWNNARISCCKVLNMICCWIENPNSNAFRRHVPRIHDFLWLAEDGMKSKFAKENQVYSKHEVSN
LKDSSEVTEEVLLTSLRRVLDQYSSLQAPDGYWPGGYSGILFILPLMIFALHVTKSLNDVLSSE
HIREICRYIYNIQNEDGGWSTHTLGPSSMFGSCVNYATLRLLGEVLDEHNDGLSKGRAWILSHG
SATVAPQWAKIYLSVIGVYDWSGNNPIIPELWLLPHFLPIHPGRFWCFCRMVYMPMSYIYAKRF
IGPITPTILALREELYDVPYNKINWNNARISCCKVLNMICCWIENPNSNAFRRHVPRIHDFLWL
AEDGMKSKFAKENQVYSKHEVSNLKDSSEVTEEVLLTSLRRVLDQYSSLQAPDGYWPGGYSGIL
FILPLMIFALHVTKSLNDVLSSEHIREICRYIYNIQNEDGGWSTHTLGPSSMFGSCVNYATLRL
LGEVLDEHNDGLSKGRAWILSHGSATVAPQWAKIYLSVIGVYDWSGNNPIIPELWLLPHFLPIH
PGRFWCFCRMVYMPMSYIYAKRFIGPITPTILALREELYDVPYNKINWNNARISCCKVLNMICC
WIENPNSNAFRRHVPRIHDFLWLAEDGMKSK(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	10367295-10360943(-)
Potential amino acid sequence	MIFALHVTKSLNDVLSSEHIREICRYIYNIQNEDGGWSTHTLGPSSMFGSCVNYATLRLLGEVL DEHNDGLSKGRAWILSHGSATVAPQWAKIYLSVIGVYDWSGNNPIIPELWLLPHFLPIHPGRFW CFCRMVYMPMSYIYAKRFIGPITPTILALREELYDVPYNKINWNNARISCCKVLNMICCWIENP NSNAFRRHVPRIHDFLWLAEDGMKSKFAKENQVYSKHEVSNLKDSSEVTEEVLLTSLRRVLDQY SSLQAPDGYWPGGYSGILFILPLMIFALHVTKSLNDVLSSEHIREICRYIYNIQNEDGGWSTHT LGPSSMFGSCVNYATLRLLGEVLDEHNDGLSKGRAWILSHGSATVAPQWAKIYLSVIGVYDWSG NNPIIPELWLLPHFLPIHPGRFWCFCRMVYMPMSYIYAKRFIGPITPTILALREELYDVPYNKI NWNNARISCCKVLNMICCWIENPNSNAFRRHVPRIHDFLWLAEDGMKSKFAKENQVYSKHEVSN LKDSSEVTEEVLLTSLRRVLDQYSSLQAPDGYWPGGYSGILFILPLMIFALHVTKSLNDVLSSE HIREICRYIYNIQNEDGGWSTHTLGPSSMFGSCVNYATLRLLGEVLDEHNDGLSKGRAWILSHG SATVAPQWAKIYLSVIGVYDWSGNNPIIPELWLLPHFLPIHPGRFWCFCRMVYMPMSYIYAKRF IGPITPTILALREELYDVPYNKINWNNARISCCKVLNMICCWIENPNSNAFRRHVPRIHDFLWL AEDGMKSKFAKENQVYSKHEVSNLKDSSEVTEEVLLTSLRRVLDQYSSLQAPDGYWPGGYSGIL FILPLMIFALHVTKSLNDVLSSEHIREICRYIYNIQNEDGGWSTHTLGPSSMFGSCVNYATLRL LGEVLDEHNDGLSKGRAWILSHGSATVAPQWAKIYLSVIGVYDWSGNNPIIPELWLLPHFLPIH PGRFWCFCRMVYMPMSYIYAKRFIGPITPTILALREELYDVPYNKINWNNARISCCKVLNMICC WIENPNSNAFRRHVPRIHDFLWLAEDGMKSK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os11g0286800_circ_g.11

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