Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT3G07160_circ_g.10 |
ID in PlantcircBase | ath_circ_020245 |
Alias | At_ciR5259 |
Organism | Arabidpsis thaliana |
Position | chr3: 2268701-2273175 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | AT3G07160 |
Parent gene annotation |
Glucan synthase-like 10 |
Parent gene strand | - |
Alternative splicing | AT3G07160_circ_g.4 AT3G07160_circ_g.5 AT3G07160_circ_g.6 AT3G07160_circ_g.7 AT3G07160_circ_g.8 AT3G07160_circ_g.9 AT3G07160_circ_g.11 AT3G07160_circ_g.12 AT3G07160_circ_g.13 AT3G07160_circ_g.14 AT3G07160_circ_g.15 AT3G07160_circ_g.16 AT3G07160_circ_g.17 AT3G07160_circ_g.18 AT3G07160_circ_g.19 AT3G07160_circ_g.20 AT3G07160_circ_g.21 AT3G07160_circ_g.22 |
Support reads | 2 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT3G07160.2:16 AT3G07160.3:16 AT3G07160.1:16 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.11747863 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | ath-miR4239 |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |