Plant Circular RNA Database

Detail information of Os03g0110400_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os03g0110400_circ_g.1
					
						ID in PlantcircBase
						osa_circ_017516
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr3: 603733-607579  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os03g0110400						
					
						Parent gene annotation
						
							Similar to nuclear matrix protein-related. (Os03t0110400-01);Hyp
othetical conserved gene. (Os03t0110400-02)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os03g0108800_circ_ag.1 Os03g0109300_circ_g.1 Os03g0109300_circ_g.2 Os03g0109300_circ_g.3 Os03g0109300_circ_g.4 Os03g0109400_circ_g.1 Os03g0109400_circ_g.2 Os03g0109400_circ_g.3 Os03g0109400_circ_g.4 Os03g0109400_circ_g.5 Os03g0109400_circ_g.6 Os03g0109600_circ_g.1 Os03g0109600_circ_g.2 Os03g0109900_circ_g.1 Os03g0109900_circ_g.2 Os03g0109900_circ_g.3 Os03g0109900_circ_g.4 Os03g0109900_circ_g.5 Os03g0109900_circ_g.6 Os03g0110400_circ_g.2 Os03g0110400_circ_g.3 Os03g0110400_circ_g.4 Os03g0110400_circ_g.5 Os03g0110500_circ_g.1 Os03g0110900_circ_g.1 Os03g0111100_circ_g.1 Os03g0111100_circ_g.2 Os03g0111100_circ_g.3 Os03g0111100_circ_g.4 Os03g0111100_circ_g.5 Os03g0111100_circ_g.6 Os03g0111100_circ_g.7 Os03g0111100_circ_g.8 Os03g0111100_circ_g.9 Os03g0111100_circ_g.10 Os03g0111100_circ_g.11 Os03g0111200_circ_g.1 Os03g0111200_circ_g.2 Os03g0111200_circ_g.3 Os03g0111400_circ_g.1 Os03g0111400_circ_g.2 Os03g0111500_circ_g.1 Os03g0111500_circ_g.2 Os03g0111500_circ_g.3 Os03g0111600_circ_g.1 Os03g0111600_circ_g.2 Os03g0111700_circ_g.1 Os03g0111700_circ_g.2 Os03g0111800_circ_g.1 Os03g0112101_circ_g.1 Os03g0112101_circ_g.2 Os03g0112101_circ_igg.1 Os03g0112101_circ_ig.1 Os03g0112101_circ_ig.2 Os03g0112101_circ_ig.3 Os03g0112101_circ_ig.4 Os03g0112101_circ_ig.5 Os03g0112101_circ_ig.6 Os03g0112101_circ_ig.7 Os03g0112101_circ_ig.8 Os03g0112400_circ_g.1 Os03g0112400_circ_igg.1 EPlOSAG00000048437_circ_ig.1 EPlOSAG00000048437_circ_ig.2 Os03g0112600_circ_ig.1 Os03g0112700_circ_g.1 Os03g0112700_circ_g.2 Os03g0112700_circ_g.3 Os03g0112700_circ_g.4 Os03g0112700_circ_g.5 Os03g0112700_circ_g.6 Os03g0112700_circ_g.7 Os03g0112800_circ_g.1 Os03g0112800_circ_g.2 Os03g0113500_circ_g.1 Os03g0113500_circ_g.2 Os03g0113500_circ_g.3 Os03g0113500_circ_g.4 Os03g0113500_circ_g.5 Os03g0113700_circ_g.1 Os03g0113800_circ_g.1 Os03g0113800_circ_g.2 Os03g0113800_circ_g.3 Os03g0113800_circ_g.4 Os03g0113800_circ_g.5 Os03g0113800_circ_g.6 Os03g0113800_circ_g.7 EPlOSAG00000003330_circ_ig.1 Os03g0114000_circ_g.1 Os03g0114300_circ_g.1 Os03g0114300_circ_g.2 Os03g0114300_circ_g.3 Os03g0114300_circ_g.4 Os03g0114300_circ_g.5 Os03g0114300_circ_g.6 Os03g0114300_circ_g.7 Os03g0114300_circ_g.8 Os03g0114300_circ_g.9 Os03g0114300_circ_g.10 Os03g0114300_circ_g.11 Os03g0115100_circ_g.1 Os03g0115400_circ_g.1 Os03g0115400_circ_g.2 Os03g0115400_circ_ig.1 Os03g0115700_circ_g.1 Os03g0116000_circ_g.1 Os03g0116000_circ_g.2 Os03g0116300_circ_g.1 Os03g0116300_circ_g.2 Os03g0116300_circ_g.3 Os03g0116300_circ_g.4 Os03g0116300_circ_g.5 Os03g0116300_circ_g.6 Os03g0116400_circ_g.1 Os03g0116400_circ_g.2 Os03g0116700_circ_g.1 Os03g0116700_circ_g.2 Os03g0116900_circ_igg.1 Os03g0117100_circ_g.1 Os03g0117100_circ_g.2 Os03g0117100_circ_g.3 Os03g0117100_circ_g.4 Os03g0117800_circ_g.1 Os03g0117800_circ_g.2 Os03g0118400_circ_g.1 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os03t0110400-01:13
Os03t0110400-02:11

General Information
CircRNA Name	Os03g0110400_circ_g.1
ID in PlantcircBase	osa_circ_017516
Alias	NA
Organism	Oryza sativa
Position	chr3: 603733-607579 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os03g0110400
Parent gene annotation	Similar to nuclear matrix protein-related. (Os03t0110400-01);Hyp othetical conserved gene. (Os03t0110400-02)
Parent gene strand	+
Alternative splicing	Os03g0108800_circ_ag.1 Os03g0109300_circ_g.1 Os03g0109300_circ_g.2 Os03g0109300_circ_g.3 Os03g0109300_circ_g.4 Os03g0109400_circ_g.1 Os03g0109400_circ_g.2 Os03g0109400_circ_g.3 Os03g0109400_circ_g.4 Os03g0109400_circ_g.5 Os03g0109400_circ_g.6 Os03g0109600_circ_g.1 Os03g0109600_circ_g.2 Os03g0109900_circ_g.1 Os03g0109900_circ_g.2 Os03g0109900_circ_g.3 Os03g0109900_circ_g.4 Os03g0109900_circ_g.5 Os03g0109900_circ_g.6 Os03g0110400_circ_g.2 Os03g0110400_circ_g.3 Os03g0110400_circ_g.4 Os03g0110400_circ_g.5 Os03g0110500_circ_g.1 Os03g0110900_circ_g.1 Os03g0111100_circ_g.1 Os03g0111100_circ_g.2 Os03g0111100_circ_g.3 Os03g0111100_circ_g.4 Os03g0111100_circ_g.5 Os03g0111100_circ_g.6 Os03g0111100_circ_g.7 Os03g0111100_circ_g.8 Os03g0111100_circ_g.9 Os03g0111100_circ_g.10 Os03g0111100_circ_g.11 Os03g0111200_circ_g.1 Os03g0111200_circ_g.2 Os03g0111200_circ_g.3 Os03g0111400_circ_g.1 Os03g0111400_circ_g.2 Os03g0111500_circ_g.1 Os03g0111500_circ_g.2 Os03g0111500_circ_g.3 Os03g0111600_circ_g.1 Os03g0111600_circ_g.2 Os03g0111700_circ_g.1 Os03g0111700_circ_g.2 Os03g0111800_circ_g.1 Os03g0112101_circ_g.1 Os03g0112101_circ_g.2 Os03g0112101_circ_igg.1 Os03g0112101_circ_ig.1 Os03g0112101_circ_ig.2 Os03g0112101_circ_ig.3 Os03g0112101_circ_ig.4 Os03g0112101_circ_ig.5 Os03g0112101_circ_ig.6 Os03g0112101_circ_ig.7 Os03g0112101_circ_ig.8 Os03g0112400_circ_g.1 Os03g0112400_circ_igg.1 EPlOSAG00000048437_circ_ig.1 EPlOSAG00000048437_circ_ig.2 Os03g0112600_circ_ig.1 Os03g0112700_circ_g.1 Os03g0112700_circ_g.2 Os03g0112700_circ_g.3 Os03g0112700_circ_g.4 Os03g0112700_circ_g.5 Os03g0112700_circ_g.6 Os03g0112700_circ_g.7 Os03g0112800_circ_g.1 Os03g0112800_circ_g.2 Os03g0113500_circ_g.1 Os03g0113500_circ_g.2 Os03g0113500_circ_g.3 Os03g0113500_circ_g.4 Os03g0113500_circ_g.5 Os03g0113700_circ_g.1 Os03g0113800_circ_g.1 Os03g0113800_circ_g.2 Os03g0113800_circ_g.3 Os03g0113800_circ_g.4 Os03g0113800_circ_g.5 Os03g0113800_circ_g.6 Os03g0113800_circ_g.7 EPlOSAG00000003330_circ_ig.1 Os03g0114000_circ_g.1 Os03g0114300_circ_g.1 Os03g0114300_circ_g.2 Os03g0114300_circ_g.3 Os03g0114300_circ_g.4 Os03g0114300_circ_g.5 Os03g0114300_circ_g.6 Os03g0114300_circ_g.7 Os03g0114300_circ_g.8 Os03g0114300_circ_g.9 Os03g0114300_circ_g.10 Os03g0114300_circ_g.11 Os03g0115100_circ_g.1 Os03g0115400_circ_g.1 Os03g0115400_circ_g.2 Os03g0115400_circ_ig.1 Os03g0115700_circ_g.1 Os03g0116000_circ_g.1 Os03g0116000_circ_g.2 Os03g0116300_circ_g.1 Os03g0116300_circ_g.2 Os03g0116300_circ_g.3 Os03g0116300_circ_g.4 Os03g0116300_circ_g.5 Os03g0116300_circ_g.6 Os03g0116400_circ_g.1 Os03g0116400_circ_g.2 Os03g0116700_circ_g.1 Os03g0116700_circ_g.2 Os03g0116900_circ_igg.1 Os03g0117100_circ_g.1 Os03g0117100_circ_g.2 Os03g0117100_circ_g.3 Os03g0117100_circ_g.4 Os03g0117800_circ_g.1 Os03g0117800_circ_g.2 Os03g0118400_circ_g.1
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os03t0110400-01:13 Os03t0110400-02:11

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GAGCAAACCAATTTATTAGTGCAATCCTCTAATTATGTGTAACTTACAGATGGATCCATCTGCT
GGTATTGAGGATGAATATCACCACAAGAATAATCGTatatcgtgctttacctttgtgaaagagg
gcatgttgagggaggtatggtattccagctgttagaagatctgacagaaatgtcaactatcaaa
gactgcaa

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							ATATCGTGCTTTACCTTTGTGAAAGAGGGCATGTTGAGGGAGGTATGGTATTCCAGCTGTTAGA
AGATCTGACAGAAATGTCAACTATCAAAGACTGCAAAGATGTATTTGGATATATTGAGAGCAAA
CAAGATGTCTTGGGGAAGGTAATTGAGAATTTGTCTTTTGTACTACATTTTGTTAAATTGGTGC
TTGTAAGGCACATATGATGTATGCAGTTGCTTTGCTAATGGGGATTACCTCATTGAGTTGTTTG
TAGCAAGAGCTTTTCGGGCGTGGCAAGCTTGTTATGCTAAGGACTTGCAACCAACTACTTCGAA
GATTATCAAAGGTTAGATTCATCTGTTTTCTTATGCATACTCTGCTATCTACTTTGTCGTAGTC
CGAATGTCTGTAGATTGAAATCATTCTGTGCTTTCCTTATTTTCTGTGCTGAGCAGTTTTATCA
AGTACTAAGCTGACTGCTGTGCTCACTGTTCAGTAAGATCTTTGGTAATGACAAATTTACTGTA
AAAATACCAAGCTATTGGACATATCATAAAAATCGTATTGTACATTGCGATGTTGTGGTCCTTT
TGCTTTAGTGAGTATTGAACAAATATATTCTTTACATTTCTCGGAGTTTTGACAGCCTATAAGG
TTGTGTTCTGTACTAGCATTGATACCCTTTGTTCTGAAATACCACAGGCAAATGATGTGGTATT
CTGCGGACGTATTATCATGTTTCTAGCACATTTCTTCCCATTATCGGAACGTTCAGGTTTGCAT
ATTTTGCATCTCTCTGTCCCCTCCTAGACAGCCCCTTATTGGCAAGGAGTGCATAACTACATTT
TCCTTGTTTTTCTATTTTATCAGCTCTCAATATCAAGGGGGTTTTTAACACATCAAATGAAACA
AAGTACGAGAAAGACGCTACAGATGGTGAGTATGACTATCCTGATAAAAAAAATATTTATTATT
TTTTTGTTGTGTGTTTTTCGTGTGACTTTATTCAATTTTTTATTTCTTCAGTCAACTGTTCTCG
TAAAAGGATAGAACTCCCTAATGTAAGCCTTTTTTTTTCTCAGGAATTTCTGTTGATTTCAACT
TCTACAATACCCTATGGAGTCTGCAGGTGGCTGCTTTGTACCCTGTCATTCTGTGGGATTCAAA
AATCATAATTGATTCCTGACACGCTTCTTAACTTTTAAACATTATATTGTTTCTCATGCTCATT
TGTCTTTTTATTTATGTTCCAGGAGCATTTTAGTAACCCTGCTTTAACTGCTGCAAATCTGACA
AGATGGCAAAAGTTTGTGTCCAATTTAACGGTACATCCTTTTGCGCATTTTTACAATTACATGA
ACCTTTTTCTTTCCCAATGCAAAATGTTAATTCTGAACTTCTCGTTGATGTTTACTGTTAATGA
AAGTGCAGGTTGTGCTAAGCACATTTGAAGCTCAGCCTCTCAGTGACGATGATGGAAAACTTAA
CAATCTTGACCAAGAGGAAGATGCTGCTTTCAATATTAAGTACCTGACAAGTAGTAAATTGATG
GGTTTGGAGGTAAGAACTTTTTGATCAGCTGATACTAACTTTTTATTATTGTTCACTGTTCATA
GACTCATATGGCAATTGCTTCTTTGCAGTTGAAGGACCCAAGTTTTCGACGCCACATCCTTGTC
CAGTGCCTCATATTCTTCGACTTTCTCAAGGCACCTGGAAAGACTGACAAAGAAGGTCCAACTG
GGAGCATGGTTAGTCCACTAAATGACTTCTCTGATTGTTTTCCATGGACAGTTGAACTTAGACT
TGAGCATCTGAAATTGTGCTGTTACCAAATTTTTAGTATTCACCTATTACTACATGATTGCTCT
TGAGTTTGTGATAGTCACAACAGCAAATGTGGCAAAGCTAGCATTAGTTCTCATGAAACCATCA
GCTCCTTTTTCTGTGCATGCTATGTGAGATCGTAAGTAGTCTGTGATAGCTATTCCCATTTTAG
TTGAACCGATTATTATCACTTATTAGCATACTTCTCACAGCGTGTGCTACTGGGCATGTAAGTA
TTAACAAACACTGATTGCACAAATTGTCCAAACCGTATGAAGTTGCTTGGCAGTGCTAGTTTTT
AGTATAACAGTGCCAACTAATACCAACTGCCTGCCTGATACAACTGGGTTATAGTGGCTAGTAC
AGACAATGAATCAGGATTAAGGAAATGCCACTCTGTACTCTGTATTAACTTTATGCTCTCTACA
ATCAGAAAGAGGAAATCGATTCTTGTGAAGAGCGTGTTAAGAAACTTCTGGAGATAATTCCACC
AAAAGGGAAGGACTTCCTACAAAGCATCGAGCATATTCTTGAGCGGGAGAAAAATTGGGTATCC
TCTTAGCTGCATGTAAGCAATATTTTATCTTAACATAGTAATTCTCACAACCAATGATTCTGTT
CCTGCTGGCTCAACTTGAAGGTATGGTGGAAACGAGATGGGTGTCTAGCGTTTGAAAAACAACC
TTTTGAAAAGAAACCAGGCCAAGCTGGAGTCAGAAAACGGTATGCTACTTCCTTTCTTCTGGCA
CTGAATTTGCCATTAGTCTATTATTGGTTCTGCTGTTGATGTGCTAGCCTATCATAATGTGTAA
CAGTTACAATAGATTTGAAATGATTTTAGTGCTAACTAAAAGAACAGCAGCTATCAACTGTGAT
ATTGTCTTATTAAATACATCCCGCAAAGCATACTGTTTATAATTTTGATGGTACTGGGAGCACC
ATATCCTAAACATTGTGTCACTGGGAGCATTAACTTCAAATACACTTTATCTGAATTACCATGG
AGCAGACAAATTAGTTATTTTATAATTTTGTGCTGCCAGTTTTTTTAATGTTCGCCAGAAGCAA
GAATCATGAATTTCACCTGTTTCACATCAACATTCTTATATAGTGTCAACTTACAATGTTATGG
ATTTAGATGTGTTGTTATATGTATGAAGTTCACAATTTGTATTCATTTGTGCTAATGCAACTAG
TTTCATATTTTTCATGAGTGAAGAGTGTAAGAATGGTCTTTGATATCGATTGCCTCGTTGAGTA
GTTGTTTGTGGCATAGGTTTATTTAGAGAAAAGGTAAAAAAACAAATTAGTAGGAAATATAGCA
TAGATTCTTGGAGTTAACAAGCCAGTATTCTACTTCACATCCTCATGTCGATTTGTAATATGAA
TTCACACAAGAAAGTCCATGTCCAAATGCAATCTAATTCTTTGATATTTTGCTTTCCTTCCTTG
TAGTAAGCCAAGGTGGAGATTGGGAAACAAAGAACTTGCCCAACTGTGGAAATGGGCTGAACAA
AACCCTGTATGTTCTACCAAGCATCCCATTACTATTATGTTTGACTTGTTACTAATAGATTTGC
ATAATCCAGTTTAAAAGGGTTCCATCCGTTGAGTTCCCTATCTGTGCCTTTCTGAGTCATTTTC
TATCCTTTTGTCATGCAACACTCTACTATTTGAAGGCATACATCTTCCATTAATCGGCCTTTCT
CATCACTTTTTATCATTTTGTGATGCAACTTGTCCAACATTTAAATTCATCATTTTTTTAGCAT
TTATTTTTTTGCATCTGACTTCTAATTTCTCCGTGAGCTGCAGAATGCTCTGACTGATTCTGAA
CGTATTTGCATGCCATCAGTAACAGAATATTGGAAACCACTTGCAGAAGATGTAAGTGTTTCAA
TTTATATAGTCATTTTTATCCGTCCTTTTTGCTTTGAGCAAACCAATTTATTAGTGCAATCCTC
TAATTATGTGTAACTTACAGATGGATCCATCTGCTGGTATTGAGGATGAATATCACCACAAGAA
TAATCGT
						
					

			
		

Sequences
Splice junction sequence	GAGCAAACCAATTTATTAGTGCAATCCTCTAATTATGTGTAACTTACAGATGGATCCATCTGCT GGTATTGAGGATGAATATCACCACAAGAATAATCGTatatcgtgctttacctttgtgaaagagg gcatgttgagggaggtatggtattccagctgttagaagatctgacagaaatgtcaactatcaaa gactgcaa
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	ATATCGTGCTTTACCTTTGTGAAAGAGGGCATGTTGAGGGAGGTATGGTATTCCAGCTGTTAGA AGATCTGACAGAAATGTCAACTATCAAAGACTGCAAAGATGTATTTGGATATATTGAGAGCAAA CAAGATGTCTTGGGGAAGGTAATTGAGAATTTGTCTTTTGTACTACATTTTGTTAAATTGGTGC TTGTAAGGCACATATGATGTATGCAGTTGCTTTGCTAATGGGGATTACCTCATTGAGTTGTTTG TAGCAAGAGCTTTTCGGGCGTGGCAAGCTTGTTATGCTAAGGACTTGCAACCAACTACTTCGAA GATTATCAAAGGTTAGATTCATCTGTTTTCTTATGCATACTCTGCTATCTACTTTGTCGTAGTC CGAATGTCTGTAGATTGAAATCATTCTGTGCTTTCCTTATTTTCTGTGCTGAGCAGTTTTATCA AGTACTAAGCTGACTGCTGTGCTCACTGTTCAGTAAGATCTTTGGTAATGACAAATTTACTGTA AAAATACCAAGCTATTGGACATATCATAAAAATCGTATTGTACATTGCGATGTTGTGGTCCTTT TGCTTTAGTGAGTATTGAACAAATATATTCTTTACATTTCTCGGAGTTTTGACAGCCTATAAGG TTGTGTTCTGTACTAGCATTGATACCCTTTGTTCTGAAATACCACAGGCAAATGATGTGGTATT CTGCGGACGTATTATCATGTTTCTAGCACATTTCTTCCCATTATCGGAACGTTCAGGTTTGCAT ATTTTGCATCTCTCTGTCCCCTCCTAGACAGCCCCTTATTGGCAAGGAGTGCATAACTACATTT TCCTTGTTTTTCTATTTTATCAGCTCTCAATATCAAGGGGGTTTTTAACACATCAAATGAAACA AAGTACGAGAAAGACGCTACAGATGGTGAGTATGACTATCCTGATAAAAAAAATATTTATTATT TTTTTGTTGTGTGTTTTTCGTGTGACTTTATTCAATTTTTTATTTCTTCAGTCAACTGTTCTCG TAAAAGGATAGAACTCCCTAATGTAAGCCTTTTTTTTTCTCAGGAATTTCTGTTGATTTCAACT TCTACAATACCCTATGGAGTCTGCAGGTGGCTGCTTTGTACCCTGTCATTCTGTGGGATTCAAA AATCATAATTGATTCCTGACACGCTTCTTAACTTTTAAACATTATATTGTTTCTCATGCTCATT TGTCTTTTTATTTATGTTCCAGGAGCATTTTAGTAACCCTGCTTTAACTGCTGCAAATCTGACA AGATGGCAAAAGTTTGTGTCCAATTTAACGGTACATCCTTTTGCGCATTTTTACAATTACATGA ACCTTTTTCTTTCCCAATGCAAAATGTTAATTCTGAACTTCTCGTTGATGTTTACTGTTAATGA AAGTGCAGGTTGTGCTAAGCACATTTGAAGCTCAGCCTCTCAGTGACGATGATGGAAAACTTAA CAATCTTGACCAAGAGGAAGATGCTGCTTTCAATATTAAGTACCTGACAAGTAGTAAATTGATG GGTTTGGAGGTAAGAACTTTTTGATCAGCTGATACTAACTTTTTATTATTGTTCACTGTTCATA GACTCATATGGCAATTGCTTCTTTGCAGTTGAAGGACCCAAGTTTTCGACGCCACATCCTTGTC CAGTGCCTCATATTCTTCGACTTTCTCAAGGCACCTGGAAAGACTGACAAAGAAGGTCCAACTG GGAGCATGGTTAGTCCACTAAATGACTTCTCTGATTGTTTTCCATGGACAGTTGAACTTAGACT TGAGCATCTGAAATTGTGCTGTTACCAAATTTTTAGTATTCACCTATTACTACATGATTGCTCT TGAGTTTGTGATAGTCACAACAGCAAATGTGGCAAAGCTAGCATTAGTTCTCATGAAACCATCA GCTCCTTTTTCTGTGCATGCTATGTGAGATCGTAAGTAGTCTGTGATAGCTATTCCCATTTTAG TTGAACCGATTATTATCACTTATTAGCATACTTCTCACAGCGTGTGCTACTGGGCATGTAAGTA TTAACAAACACTGATTGCACAAATTGTCCAAACCGTATGAAGTTGCTTGGCAGTGCTAGTTTTT AGTATAACAGTGCCAACTAATACCAACTGCCTGCCTGATACAACTGGGTTATAGTGGCTAGTAC AGACAATGAATCAGGATTAAGGAAATGCCACTCTGTACTCTGTATTAACTTTATGCTCTCTACA ATCAGAAAGAGGAAATCGATTCTTGTGAAGAGCGTGTTAAGAAACTTCTGGAGATAATTCCACC AAAAGGGAAGGACTTCCTACAAAGCATCGAGCATATTCTTGAGCGGGAGAAAAATTGGGTATCC TCTTAGCTGCATGTAAGCAATATTTTATCTTAACATAGTAATTCTCACAACCAATGATTCTGTT CCTGCTGGCTCAACTTGAAGGTATGGTGGAAACGAGATGGGTGTCTAGCGTTTGAAAAACAACC TTTTGAAAAGAAACCAGGCCAAGCTGGAGTCAGAAAACGGTATGCTACTTCCTTTCTTCTGGCA CTGAATTTGCCATTAGTCTATTATTGGTTCTGCTGTTGATGTGCTAGCCTATCATAATGTGTAA CAGTTACAATAGATTTGAAATGATTTTAGTGCTAACTAAAAGAACAGCAGCTATCAACTGTGAT ATTGTCTTATTAAATACATCCCGCAAAGCATACTGTTTATAATTTTGATGGTACTGGGAGCACC ATATCCTAAACATTGTGTCACTGGGAGCATTAACTTCAAATACACTTTATCTGAATTACCATGG AGCAGACAAATTAGTTATTTTATAATTTTGTGCTGCCAGTTTTTTTAATGTTCGCCAGAAGCAA GAATCATGAATTTCACCTGTTTCACATCAACATTCTTATATAGTGTCAACTTACAATGTTATGG ATTTAGATGTGTTGTTATATGTATGAAGTTCACAATTTGTATTCATTTGTGCTAATGCAACTAG TTTCATATTTTTCATGAGTGAAGAGTGTAAGAATGGTCTTTGATATCGATTGCCTCGTTGAGTA GTTGTTTGTGGCATAGGTTTATTTAGAGAAAAGGTAAAAAAACAAATTAGTAGGAAATATAGCA TAGATTCTTGGAGTTAACAAGCCAGTATTCTACTTCACATCCTCATGTCGATTTGTAATATGAA TTCACACAAGAAAGTCCATGTCCAAATGCAATCTAATTCTTTGATATTTTGCTTTCCTTCCTTG TAGTAAGCCAAGGTGGAGATTGGGAAACAAAGAACTTGCCCAACTGTGGAAATGGGCTGAACAA AACCCTGTATGTTCTACCAAGCATCCCATTACTATTATGTTTGACTTGTTACTAATAGATTTGC ATAATCCAGTTTAAAAGGGTTCCATCCGTTGAGTTCCCTATCTGTGCCTTTCTGAGTCATTTTC TATCCTTTTGTCATGCAACACTCTACTATTTGAAGGCATACATCTTCCATTAATCGGCCTTTCT CATCACTTTTTATCATTTTGTGATGCAACTTGTCCAACATTTAAATTCATCATTTTTTTAGCAT TTATTTTTTTGCATCTGACTTCTAATTTCTCCGTGAGCTGCAGAATGCTCTGACTGATTCTGAA CGTATTTGCATGCCATCAGTAACAGAATATTGGAAACCACTTGCAGAAGATGTAAGTGTTTCAA TTTATATAGTCATTTTTATCCGTCCTTTTTGCTTTGAGCAAACCAATTTATTAGTGCAATCCTC TAATTATGTGTAACTTACAGATGGATCCATCTGCTGGTATTGAGGATGAATATCACCACAAGAA TAATCGT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.110215259

Conservation Information
Conserved circRNAs	NA
PMCS	0.110215259

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							603778-603792(+)
						
						Potential amino acid sequence
						
							MVFQLLEDLTEMSTIKDCKDVFGYIESKQDVLGKQELFGRGKLVMLRTCNQLLRRLSKANDVVF
CGRIIMFLAHFFPLSERSALNIKGVFNTSNETKYEKDATDGISVDFNFYNTLWSLQEHFSNPAL
TAANLTRWQKFVSNLTVVLSTFEAQPLSDDDGKLNNLDQEEDAAFNIKYLTSSKLMGLELKDPS
FRRHILVQCLIFFDFLKAPGKTDKEGPTGSMKEEIDSCEERVKKLLEIIPPKGKDFLQSIEHIL
EREKNWVWWKRDGCLAFEKQPFEKKPGQAGVRKRKPRWRLGNKELAQLWKWAEQNPNALTDSER
ICMPSVTEYWKPLAEDMDPSAGIEDEYHHKNNRISCFTFVKEGMLREVWYSSC*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	603778-603792(+)
Potential amino acid sequence	MVFQLLEDLTEMSTIKDCKDVFGYIESKQDVLGKQELFGRGKLVMLRTCNQLLRRLSKANDVVF CGRIIMFLAHFFPLSERSALNIKGVFNTSNETKYEKDATDGISVDFNFYNTLWSLQEHFSNPAL TAANLTRWQKFVSNLTVVLSTFEAQPLSDDDGKLNNLDQEEDAAFNIKYLTSSKLMGLELKDPS FRRHILVQCLIFFDFLKAPGKTDKEGPTGSMKEEIDSCEERVKKLLEIIPPKGKDFLQSIEHIL EREKNWVWWKRDGCLAFEKQPFEKKPGQAGVRKRKPRWRLGNKELAQLWKWAEQNPNALTDSER ICMPSVTEYWKPLAEDMDPSAGIEDEYHHKNNRISCFTFVKEGMLREVWYSSC*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os03g0110400_circ_g.1

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