Plant Circular RNA Database

Detail information of Os12g0568200_circ_ag.1

			
						 General Information
					
						CircRNA Name
						Os12g0568200_circ_ag.1
					
						ID in PlantcircBase
						osa_circ_012047
					
						Alias
						Os_ciR2015
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr12: 23383724-23390797  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ag-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							NA						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						NA
					
						Alternative splicing
						
							Os12g0567800_circ_g.1 Os12g0567800_circ_ag.1 Os12g0567800_circ_g.2 Os12g0567800_circ_g.3 Os12g0567800_circ_g.4 Os12g0567800_circ_g.5 Os12g0567800_circ_ag.6 Os12g0567800_circ_ag.7 Os12g0567800_circ_igg.1 Os12g0567800_circ_ag.2 Os12g0567800_circ_ag.3 Os12g0568100_circ_ig.1 Os12g0568200_circ_igg.1 Os12g0568500_circ_igg.1 Os12g0568166_circ_g.1 Os12g0568200_circ_ag.2 Os12g0568350_circ_g.1 Os12g0568350_circ_g.2 Os12g0568350_circ_g.3 Os12g0568350_circ_g.4 Os12g0568350_circ_g.5 						
					
						Support reads
						75
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						NA

General Information
CircRNA Name	Os12g0568200_circ_ag.1
ID in PlantcircBase	osa_circ_012047
Alias	Os_ciR2015
Organism	Oryza sativa
Position	chr12: 23383724-23390797 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ag-circRNA
Identification method	find_circ
Parent gene	NA
Parent gene annotation	NA
Parent gene strand	NA
Alternative splicing	Os12g0567800_circ_g.1 Os12g0567800_circ_ag.1 Os12g0567800_circ_g.2 Os12g0567800_circ_g.3 Os12g0567800_circ_g.4 Os12g0567800_circ_g.5 Os12g0567800_circ_ag.6 Os12g0567800_circ_ag.7 Os12g0567800_circ_igg.1 Os12g0567800_circ_ag.2 Os12g0567800_circ_ag.3 Os12g0568100_circ_ig.1 Os12g0568200_circ_igg.1 Os12g0568500_circ_igg.1 Os12g0568166_circ_g.1 Os12g0568200_circ_ag.2 Os12g0568350_circ_g.1 Os12g0568350_circ_g.2 Os12g0568350_circ_g.3 Os12g0568350_circ_g.4 Os12g0568350_circ_g.5
Support reads	75
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	NA

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAGCCACAGCTGCAGCCATGGGCAGCCTCACCA
GACTCACCTGCCTTGCCAACCATCACCTCAAAATGCcccttctcaggtgcaacgccgaggacag
tggttgcagtagtggtggtggtggtgatcttctcagccaggtcagggtacatctttctgaacca
agaaaaaa

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 475
Transcript exons: 23383724-23383810,23384047-23384201,23390565-23390797
CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG
CCAGGTCAGGGTACATCTTTCTGTACCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACA
ACTTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGT
TGGATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCACCTGATTCGCAC
ATGGTTGAGACAAACACACACACACACAGGCATGAGCCATCACACTGGATGGACTCTTTATTTA
TTCATCATGTAGACAGGCTGGTGCATTGGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTT
GCAGGGGTTGCACTTGCAGCTGGAGCCACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCT
GCCTTGCCAACCATCACCTCAAAATGC
Transcript length: 502
Transcript exons: 23383724-23383808,23384049-23384234,23390567-23390797
CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG
CCAGGTCAGGGTACATCTTTCCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAACTT
CCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTGGA
TGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTAGT
AGTACCCTTGAGAAGCCTGATTCGCACATGGTTGAGACAAACACACACACACACAGGCATGAGC
CATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGTGCATTGGCAATTCAG
TCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAGCCACAGCTGCAG
CCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAAAATGC
Transcript length: 503
Transcript exons: 23383724-23383810,23384050-23384232,23390565-23390797
CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG
CCAGGTCAGGGTACATCTTTCTGCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAACT
TCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTGG
ATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTAG
TAGTACCCTTGAGACACCTGATTCGCACATGGTTGAGACAAACACACACACACACAGGCATGAG
CCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGTGCATTGGCAATTCA
GTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAGCCACAGCTGCA
GCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAAAATGC
Transcript length: 506
Transcript exons: 23383724-23383810,23384049-23384236,23390567-23390797
CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG
CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC
TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG
GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA
GTAGTACCCTTGAGAAGAACCTGATTCGCACATGGTTGAGACAAACACACACACACACAGGCAT
GAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGTGCATTGGCAAT
TCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAGCCACAGCT
GCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAAAATGC
Transcript length: 507
Transcript exons: 23383724-23383808,23384049-23384231,23390559-23390797
CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG
CCAGGTCAGGGTACATCTTTCCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAACTT
CCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTGGA
TGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTAGT
AGTACCCTTGAGTTTTGACACCTGATTCGCACATGGTTGAGACAAACACACACACACACAGGCA
TGAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGTGCATTGGCAA
TTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAGCCACAGC
TGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAAAATGC
Transcript length: 511
Transcript exons: 23383724-23383810,23384049-23384241,23390567-23390797
CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG
CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC
TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG
GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA
GTAGTACCCTTGAGAAGAAGCTGCCCTGATTCGCACATGGTTGAGACAAACACACACACACACA
GGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGTGCATTG
GCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAGCCA
CAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAAAATGC
Transcript length: 512
Transcript exons: 23383724-23383809,23384048-23384242,23390567-23390797
CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG
CCAGGTCAGGGTACATCTTTCTACCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC
TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG
GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA
GTAGTACCCTTGAGAAGAAGCTGCGCCTGATTCGCACATGGTTGAGACAAACACACACACACAC
AGGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGTGCATT
GGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAGCC
ACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAAAATGC
Transcript length: 512
Transcript exons: 23383724-23383810,23384049-23384243,23390568-23390797
CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG
CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC
TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG
GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA
GTAGTACCCTTGAGAAGAAGCTGCGGCTGATTCGCACATGGTTGAGACAAACACACACACACAC
AGGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGTGCATT
GGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAGCC
ACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAAAATGC
Transcript length: 514
Transcript exons: 23383724-23383810,23384049-23384243,23390566-23390797
CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG
CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC
TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG
GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA
GTAGTACCCTTGAGAAGAAGCTGCGGACCTGATTCGCACATGGTTGAGACAAACACACACACAC
ACAGGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGTGCA
TTGGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAG
CCACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAAAAT
GC
Transcript length: 517
Transcript exons: 23383724-23383810,23384049-23384248,23390568-23390797
CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG
CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC
TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG
GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA
GTAGTACCCTTGAGAAGAAGCTGCGGAATTACTGATTCGCACATGGTTGAGACAAACACACACA
CACACAGGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGT
GCATTGGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTG
GAGCCACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAA
AATGC
Transcript length: 520
Transcript exons: 23383724-23383810,23384049-23384242,23390559-23390797
CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG
CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC
TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG
GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA
GTAGTACCCTTGAGAAGAAGCTGCGTTTTGACACCTGATTCGCACATGGTTGAGACAAACACAC
ACACACACAGGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCT
GGTGCATTGGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAG
CTGGAGCCACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCT
CAAAATGC
Transcript length: 521
Transcript exons: 23383724-23383810,23384049-23384243,23390559-23390797
CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG
CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC
TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG
GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA
GTAGTACCCTTGAGAAGAAGCTGCGGTTTTGACACCTGATTCGCACATGGTTGAGACAAACACA
CACACACACAGGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGC
TGGTGCATTGGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCA
GCTGGAGCCACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACC
TCAAAATGC
Transcript length: 531
Transcript exons: 23383724-23383810,23384049-23384256,23390562-23390797
CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG
CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC
TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG
GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA
GTAGTACCCTTGAGAAGAAGCTGCGGAATTATGTCAAAGTGACACCTGATTCGCACATGGTTGA
GACAAACACACACACACACAGGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATCAT
GTAGACAGGCTGGTGCATTGGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGT
TGCACTTGCAGCTGGAGCCACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCC
AACCATCACCTCAAAATGC
Transcript length: 533
Transcript exons: 23383724-23383810,23384049-23384256,23390560-23390797
CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG
CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC
TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG
GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA
GTAGTACCCTTGAGAAGAAGCTGCGGAATTATGTCAAAGTTTGACACCTGATTCGCACATGGTT
GAGACAAACACACACACACACAGGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATC
ATGTAGACAGGCTGGTGCATTGGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGG
GTTGCACTTGCAGCTGGAGCCACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTG
CCAACCATCACCTCAAAATGC
Transcript length: 537
Transcript exons: 23383724-23383810,23384049-23384261,23390561-23390797
CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG
CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC
TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG
GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA
GTAGTACCCTTGAGAAGAAGCTGCGGAATTATGTCAAAGCATTATTGACACCTGATTCGCACAT
GGTTGAGACAAACACACACACACACAGGCATGAGCCATCACACTGGATGGACTCTTTATTTATT
CATCATGTAGACAGGCTGGTGCATTGGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGC
AGGGGTTGCACTTGCAGCTGGAGCCACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGC
CTTGCCAACCATCACCTCAAAATGC
						
					

						Genomic sequence
						
							TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.						
					

			
		

Sequences
Splice junction sequence	TTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAGCCACAGCTGCAGCCATGGGCAGCCTCACCA GACTCACCTGCCTTGCCAACCATCACCTCAAAATGCcccttctcaggtgcaacgccgaggacag tggttgcagtagtggtggtggtggtgatcttctcagccaggtcagggtacatctttctgaacca agaaaaaa
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 475 Transcript exons: 23383724-23383810,23384047-23384201,23390565-23390797 CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG CCAGGTCAGGGTACATCTTTCTGTACCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACA ACTTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGT TGGATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCACCTGATTCGCAC ATGGTTGAGACAAACACACACACACACAGGCATGAGCCATCACACTGGATGGACTCTTTATTTA TTCATCATGTAGACAGGCTGGTGCATTGGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTT GCAGGGGTTGCACTTGCAGCTGGAGCCACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCT GCCTTGCCAACCATCACCTCAAAATGC Transcript length: 502 Transcript exons: 23383724-23383808,23384049-23384234,23390567-23390797 CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG CCAGGTCAGGGTACATCTTTCCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAACTT CCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTGGA TGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTAGT AGTACCCTTGAGAAGCCTGATTCGCACATGGTTGAGACAAACACACACACACACAGGCATGAGC CATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGTGCATTGGCAATTCAG TCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAGCCACAGCTGCAG CCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAAAATGC Transcript length: 503 Transcript exons: 23383724-23383810,23384050-23384232,23390565-23390797 CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG CCAGGTCAGGGTACATCTTTCTGCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAACT TCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTGG ATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTAG TAGTACCCTTGAGACACCTGATTCGCACATGGTTGAGACAAACACACACACACACAGGCATGAG CCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGTGCATTGGCAATTCA GTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAGCCACAGCTGCA GCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAAAATGC Transcript length: 506 Transcript exons: 23383724-23383810,23384049-23384236,23390567-23390797 CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA GTAGTACCCTTGAGAAGAACCTGATTCGCACATGGTTGAGACAAACACACACACACACAGGCAT GAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGTGCATTGGCAAT TCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAGCCACAGCT GCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAAAATGC Transcript length: 507 Transcript exons: 23383724-23383808,23384049-23384231,23390559-23390797 CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG CCAGGTCAGGGTACATCTTTCCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAACTT CCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTGGA TGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTAGT AGTACCCTTGAGTTTTGACACCTGATTCGCACATGGTTGAGACAAACACACACACACACAGGCA TGAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGTGCATTGGCAA TTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAGCCACAGC TGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAAAATGC Transcript length: 511 Transcript exons: 23383724-23383810,23384049-23384241,23390567-23390797 CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA GTAGTACCCTTGAGAAGAAGCTGCCCTGATTCGCACATGGTTGAGACAAACACACACACACACA GGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGTGCATTG GCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAGCCA CAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAAAATGC Transcript length: 512 Transcript exons: 23383724-23383809,23384048-23384242,23390567-23390797 CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG CCAGGTCAGGGTACATCTTTCTACCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA GTAGTACCCTTGAGAAGAAGCTGCGCCTGATTCGCACATGGTTGAGACAAACACACACACACAC AGGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGTGCATT GGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAGCC ACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAAAATGC Transcript length: 512 Transcript exons: 23383724-23383810,23384049-23384243,23390568-23390797 CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA GTAGTACCCTTGAGAAGAAGCTGCGGCTGATTCGCACATGGTTGAGACAAACACACACACACAC AGGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGTGCATT GGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAGCC ACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAAAATGC Transcript length: 514 Transcript exons: 23383724-23383810,23384049-23384243,23390566-23390797 CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA GTAGTACCCTTGAGAAGAAGCTGCGGACCTGATTCGCACATGGTTGAGACAAACACACACACAC ACAGGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGTGCA TTGGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTGGAG CCACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAAAAT GC Transcript length: 517 Transcript exons: 23383724-23383810,23384049-23384248,23390568-23390797 CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA GTAGTACCCTTGAGAAGAAGCTGCGGAATTACTGATTCGCACATGGTTGAGACAAACACACACA CACACAGGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCTGGT GCATTGGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAGCTG GAGCCACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCTCAA AATGC Transcript length: 520 Transcript exons: 23383724-23383810,23384049-23384242,23390559-23390797 CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA GTAGTACCCTTGAGAAGAAGCTGCGTTTTGACACCTGATTCGCACATGGTTGAGACAAACACAC ACACACACAGGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGCT GGTGCATTGGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCAG CTGGAGCCACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACCT CAAAATGC Transcript length: 521 Transcript exons: 23383724-23383810,23384049-23384243,23390559-23390797 CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA GTAGTACCCTTGAGAAGAAGCTGCGGTTTTGACACCTGATTCGCACATGGTTGAGACAAACACA CACACACACAGGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATCATGTAGACAGGC TGGTGCATTGGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGTTGCACTTGCA GCTGGAGCCACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCCAACCATCACC TCAAAATGC Transcript length: 531 Transcript exons: 23383724-23383810,23384049-23384256,23390562-23390797 CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA GTAGTACCCTTGAGAAGAAGCTGCGGAATTATGTCAAAGTGACACCTGATTCGCACATGGTTGA GACAAACACACACACACACAGGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATCAT GTAGACAGGCTGGTGCATTGGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGGGT TGCACTTGCAGCTGGAGCCACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTGCC AACCATCACCTCAAAATGC Transcript length: 533 Transcript exons: 23383724-23383810,23384049-23384256,23390560-23390797 CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA GTAGTACCCTTGAGAAGAAGCTGCGGAATTATGTCAAAGTTTGACACCTGATTCGCACATGGTT GAGACAAACACACACACACACAGGCATGAGCCATCACACTGGATGGACTCTTTATTTATTCATC ATGTAGACAGGCTGGTGCATTGGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGCAGGG GTTGCACTTGCAGCTGGAGCCACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGCCTTG CCAACCATCACCTCAAAATGC Transcript length: 537 Transcript exons: 23383724-23383810,23384049-23384261,23390561-23390797 CCCTTCTCAGGTGCAACGCCGAGGACAGTGGTTGCAGTAGTGGTGGTGGTGGTGATCTTCTCAG CCAGGTCAGGGTACATCTTTCTGCCCGCAGCCACCGCCGCATCCGCAGGAACCGCAGTTACAAC TTCCACCGCACGACATCTTGATCTTCTGGGTCTCTTGTAAACTCTTCAGGAACTTGTGTAGTTG GATGAAATGAGAGATTGAAAGCTTGATATGAACTCAGTTCAGATATGCCCTCCTATTTATAGTA GTAGTACCCTTGAGAAGAAGCTGCGGAATTATGTCAAAGCATTATTGACACCTGATTCGCACAT GGTTGAGACAAACACACACACACACAGGCATGAGCCATCACACTGGATGGACTCTTTATTTATT CATCATGTAGACAGGCTGGTGCATTGGCAATTCAGTCATAGATCATCTTGGCCTTAGCAGTTGC AGGGGTTGCACTTGCAGCTGGAGCCACAGCTGCAGCCATGGGCAGCCTCACCAGACTCACCTGC CTTGCCAACCATCACCTCAAAATGC
Genomic sequence	TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.394732043

Conservation Information
Conserved circRNAs	NA
PMCS	0.394732043

			
						 Functional Information
					
						Coding potential
						N
					
						Potential coding position
						
							NA
						
						Potential amino acid sequence
						
							NA
						
						Sponge-miRNAs
						
							osa-miR2919 osa-miR2919 						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	N
Potential coding position	NA
Potential amino acid sequence	NA
Sponge-miRNAs	osa-miR2919 osa-miR2919
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015

circRNA

Detail information of Os12g0568200_circ_ag.1

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