Splice junction sequence |
ACGCGTCAGATCGGCTAATGCCATTGGTCCAAGCCCACAGATAAATAATAATACTGCTGCAGGG AGGACTCCGGGGTTTGATCACCCTGTCCACAAGAATattcggttctgattggagctgccatgga acgcatcatcggcggcaagtacaagctcggacggaagatcggcggtggttcgttcggagagatt tttctagg
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 1136 Transcript exons: 14251328-14251426,14251523-14251563,14251766-14251835,14 251925-14252073,14252177-14252272,14252350-14252420,1425 2531-14252592,14252668-14252731,14252858-14252942,142530 22-14253148,14253256-14253332,14253421-14253478,14253554 -14253690 ATTCGGTTCTGATTGGAGCTGCCATGGAACGCATCATCGGCGGCAAGTACAAGCTCGGACGGAA GATCGGCGGTGGTTCGTTCGGAGAGATTTTTCTAGCTACGCACGTCGATACCTTCGAGATCGTA GCTGTTAAGATCGAGAACAGTAAAACAAAGCATCCTCAACTTCTCTATGAAGCTAAGCTATATA GAATTCTTGAAGGAGGAAGTGGAATTCCGCGCATAAAATGGTTTGGAGTTGATGGAACAGAGAA TGCTTTAGTGATGGATTTGCTCGGTCCAAGTCTCGAAGATCTTTTCGTCTACTGTGGGAGGAAA TTCTCACCAAAGACAGTCTTGATGTTGGCTGATCAAATGCTAACAAGAATAGAATTTGTACATT CGAAAGGATATCTGCATAGAGATATTAAACCCGATAACTTCCTCATGGGCCTAGGTCGGAAAGC AAATCAGGTTTATCTAATTGACTTTGGACTTGCCAAAAGATATCGGGATGCCAACACCAACCGC CACATCCCTTACAGGGAAAACAAGAATTTAACAGGAACTGCACGATATGCAAGTTGCAATACAC ATCTTGGAATTGAGCAAAGTCGACGGGATGATCTAGAATCGCTGGGATATGTGCTTCTGTATTT CCTAAGAGGAAGTCTTCCATGGCAGGGTCTTAAGGCTGTTGACAAGAAGCAAAAGTATGATAAA ATCTGTGAGAAGAAGATATCAACTCCCATTGAGGTGCTATGCAAAAATCACCCTGTGGAGTTTG CATCATATTTTCATTACTGCCATACACTGACATTTGATCAGCGCCCAGATTATGGATTCTTGAA GCGGCTTTTTCGTGATTTATTTTCGCGGGAAGGATATGAGTTCGACTATATATTTGACTGGACT ATCATAAAGTATCAACAAGCACAGAAATCTAGAAATCAGTCTCAGGCAGTTCCTGGGTCTAGCA ATCCTCGTGCAATGCCAGTGGACACAAGCAATCATCGGGGAGGACCAAATATTTCTTATGAAGC CGAGGCCTCTGAACGCGTCAGATCGGCTAATGCCATTGGTCCAAGCCCACAGATAAATAATAAT ACTGCTGCAGGGAGGACTCCGGGGTTTGATCACCCTGTCCACAAGAAT
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Genomic sequence |
ATTCGGTTCTGATTGGAGCTGCCATGGAACGCATCATCGGCGGCAAGTACAAGCTCGGACGGAA GATCGGCGGTGGTTCGTTCGGAGAGATTTTTCTAGGTTTTGTGTTCTCCTCTGTTCTTGTCCCT TTGGTTTTCCGAGTTTGCTTTTTTATTTGAAATTGACGCTCTTCTCTTCTGTTTGTTGTTTTCG CAGCTACGCACGTCGATACCTTCGAGATCGTAGCTGTTAAGATCGTAAGTCCCAGCTCAATTTG CCTTGAGACGAATTGAATCCATCCAATCTGGAGATTTGATTTGGATCTGCTATGTCTCTTAATT GATTTTGTTTGAATTGCTTTACTCTAAAATTGAGCAAGGTTTTAAACTCGGTGCTTTTTAGCTG CAATATATTCTTCAAGCTAACACTTGTTTTTAATTCAATCATTTTCTCTTGCAGGAGAACAGTA AAACAAAGCATCCTCAACTTCTCTATGAAGCTAAGCTATATAGAATTCTTGAAGGAGGAAGTAT GATTCTCTTTCCTCTCTTTTCTCAGTTGTTGGACATTGGAGGGATTCATTAGCAGTACAATACT AATTTTTATGTTATGTGTCAGGTGGAATTCCGCGCATAAAATGGTTTGGAGTTGATGGAACAGA GAATGCTTTAGTGATGGATTTGCTCGGTCCAAGTCTCGAAGATCTTTTCGTCTACTGTGGGAGG AAATTCTCACCAAAGACAGTCTTGATGTTGGCTGATCAAATGGTATGGCATGACTTTCAACTAT TCATTAGGCTATTTATAATATCTGTTGACTTATACATTGATTATCTAATGTGCTTCCGATTTTC TTATCCCGCTGTTACAGCTAACAAGAATAGAATTTGTACATTCGAAAGGATATCTGCATAGAGA TATTAAACCCGATAACTTCCTCATGGGCCTAGGTCGGAAAGCAAATCAGGTATATTTCTGCAAC TTCTTATCTTCATCAGATGCCATAAGTAGAGTATGGTATGATTGATAAGTCTCATTTTTCAGGT TTATCTAATTGACTTTGGACTTGCCAAAAGATATCGGGATGCCAACACCAACCGCCACATCCCT TACAGGTATTGTGGCCTTGGTTCAATATACAGATTGTAAATGATCTATCTGTTTTTAAGTTTTA CGGTCACGTTAATCATTATACAACTTATTTCCTTTATTCGGCTATATTCAGGGAAAACAAGAAT TTAACAGGAACTGCACGATATGCAAGTTGCAATACACATCTTGGAATTGGTAAGAAATGCTGGC ATTCTTTATCCTTATGTAAAAGTAAATCGCTTTTGCTCATATTTTGGGTTCTCTTCACAGAGCA AAGTCGACGGGATGATCTAGAATCGCTGGGATATGTGCTTCTGTATTTCCTAAGAGGAAGGTGT GTTGTCTTTTTGAAAGAAACTAGTTAACATTATGTTATTTCGCAGGGTATTTCTATTCCTTGTT TTTAGAGATTTACTTAACTGTTTTTTGTGTTCCTCATTTCATGAACGTCCTTTTCTAGTCTTCC ATGGCAGGGTCTTAAGGCTGTTGACAAGAAGCAAAAGTATGATAAAATCTGTGAGAAGAAGATA TCAACTCCCATTGAGGTATGTTTCCCTATTGTGTGATTGATTCTTTTTTTGTTAATCCTCATTC GACTAAGTATATATCGATATCCCATTGCAGGTGCTATGCAAAAATCACCCTGTGGAGTTTGCAT CATATTTTCATTACTGCCATACACTGACATTTGATCAGCGCCCAGATTATGGATTCTTGAAGCG GCTTTTTCGTGATTTATTTTCGCGGGAAGGTAGGTACTTTGGATAAAGACATCTCTTCATCATT CATAGTTCACTCAGCTGATAAGGTTCACCGGCATCATCTACCTACCTCACTATTATATGTTCTC TTTTGCAGGATATGAGTTCGACTATATATTTGACTGGACTATCATAAAGTATCAACAAGCACAG AAATCTAGAAATCAGTCTCAGGTATAGTTTTCAATGTTTTCTCAATCTTAATTTGCTGCTGTGT CACCTTTCTTGTTACTAACAAAAAGTATTGTCATTTCTACTGCAGGCAGTTCCTGGGTCTAGCA ATCCTCGTGCAATGCCAGTGGACACAAGCAATCATCGGGGTTAGCTCTAATTAATAGCTTGTTG TTGCAATTGTTTATTTTGAAATCTCTGTTTTCTGACGCTCTGTTTGGCAGGAGGACCAAATATT TCTTATGAAGCCGAGGCCTCTGAACGCGTCAGATCGGCTAATGCCATTGGTCCAAGCCCACAGA TAAATAATAATACTGCTGCAGGGAGGACTCCGGGGTTTGATCACCCTGTCCACAAGAAT |