Splice junction sequence |
GAGTCCCGCTCACCGATATGGCCTCTACGCGCTTCAATGGATCGTGGAAGTTAATGGGAAGAAG ACTCCTGACCTAAACGCATTCGCAGATGCTACCAAGgttaaatatagttccacttcttcagaag accaccagtttgtcagaggtatcccagtatatgcaatcagccaagtccttgaaaaaatcataac cggtggaa
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 714 Transcript exons: 806862-807089,807229-807444,807607-807764,807902-808013 GTTAAATATAGTTCCACTTCTTCAGAAGACCACCAGTTTGTCAGAGGTATCCCAGTATATGCAA TCAGCCAAGTCCTTGAAAAAATCATAACCGGTGGAAATGGACCAGCTCTTCTCATAAATGGTGT CAAAAGGCCAATGCCACTTGTTCGGATTTTGGAAGTTGAATTGTATCCTACTTTGCTTTCAAAA GCCCGGAGTTTTGGTCTGAGTGATGAATGGATCCAAGTCCTAGTCAAGAAGGATCCTGTTAGAC GTCAAGTTCTGCGTGTTAAAGGTTGCCTGGCAGGATCAAAAGCTGAAAACCTTCTTGAACAAGG CGATATGGTTCTGGCAGTCAATAAGATGCCAGTTACATGCTTCAATGACATAGAAGCTGCTTGC CAAACATTGGATAAGGGTAGTTACAGCGATGAAAATCTCAATCTAACAATCCTTAGACAGGGCC AAGAACTGGAGCTCGTAGTTGGAACTGATAAGAGAGATGGGAATGGAACGACAAGAGTGATAAA TTGGTGCGGATGCGTTGTTCAGGATCCTCATCCTGCGGTTCGTGCTCTTGGATTTCTTCCTGAG GAAGGTCATGGTGTCTATGTCACAAGATGGTGTCACGGGAGTCCCGCTCACCGATATGGCCTCT ACGCGCTTCAATGGATCGTGGAAGTTAATGGGAAGAAGACTCCTGACCTAAACGCATTCGCAGA TGCTACCAAG
|
Genomic sequence |
GTTAAATATAGTTCCACTTCTTCAGAAGACCACCAGTTTGTCAGAGGTATCCCAGTATATGCAA TCAGCCAAGTCCTTGAAAAAATCATAACCGGTGGAAATGGACCAGCTCTTCTCATAAATGGTGT CAAAAGGCCAATGCCACTTGTTCGGATTTTGGAAGTTGAATTGTATCCTACTTTGCTTTCAAAA GCCCGGAGTTTTGGTCTGAGTGATGAATGGATCCAAGTAAGCCATTTGTTAATATATTTTGTGA TATTTCTGCGTAGATTGTTTATTATATCAATATATGTCTTTGTGCTTAGAATCTTAGTCTACTA AAATTAGGCATTCTCAAATCCGTTTACTATATTGATTGTTCTCACAGGTCCTAGTCAAGAAGGA TCCTGTTAGACGTCAAGTTCTGCGTGTTAAAGGTTGCCTGGCAGGATCAAAAGCTGAAAACCTT CTTGAACAAGGCGATATGGTTCTGGCAGTCAATAAGATGCCAGTTACATGCTTCAATGACATAG AAGCTGCTTGCCAAACATTGGATAAGGGTAGTTACAGCGATGAAAATCTCAATCTAACAATCCT TAGACAGGTGACACCATTAACTCATTTTTCTTGAAACATCTTATTATTTATTTGTTTCTTCTTT ATCACCTGAGTCTGTGACAAAAGTAGTTCGTATCCTTTTCTTGAGTTTCTTGACACAAATAATT TTAGGTCTACGTGTTTATTTAATCTCTTGTTGGTTTGTTAGGGCCAAGAACTGGAGCTCGTAGT TGGAACTGATAAGAGAGATGGGAATGGAACGACAAGAGTGATAAATTGGTGCGGATGCGTTGTT CAGGATCCTCATCCTGCGGTTCGTGCTCTTGGATTTCTTCCTGAGGAAGGTCATGGTGTCTATG TCACAAGGTACTAGTTAGTTGTGACCTACATATGAAATCTCAATTTGGTTTAATAAAAAATCTG GTTCTTACCAATTTATTTGTCTCAACCGACTAGAATTCATCAGTTGCTTTGATATACCCTTTGA CAAATTATCTTCTCAGATGGTGTCACGGGAGTCCCGCTCACCGATATGGCCTCTACGCGCTTCA ATGGATCGTGGAAGTTAATGGGAAGAAGACTCCTGACCTAAACGCATTCGCAGATGCTACCAAG |