Plant Circular RNA Database

Detail information of AT3G03380_circ_g.9

			
						 General Information
					
						CircRNA Name
						AT3G03380_circ_g.9
					
						ID in PlantcircBase
						ath_circ_019471
					
						Alias
						3:802100-805365
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr3: 802100-805365  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ; CIRI2
					
						Parent gene
						
							AT3G03380						
					
						Parent gene annotation
						
							Protease Do-like 7
							
						Parent gene strand
						+
					
						Alternative splicing
						
							3_circ_ag.3 AT3G03330_circ_g.1 AT3G03330_circ_g.2 AT3G03340_circ_g.1 AT3G03340_circ_g.2 AT3G03340_circ_g.3 AT3G03340_circ_g.4 AT3G03340_circ_g.5 AT3G03340_circ_g.6 AT3G03350_circ_g.1 AT3G03350_circ_g.2 3_circ_ag.3 AT3G03350_circ_g.4 3_circ_ag.5 AT3G03380_circ_g.1 AT3G03380_circ_g.2 AT3G03380_circ_g.3 AT3G03380_circ_g.4 AT3G03380_circ_g.5 AT3G03380_circ_g.6 AT3G03380_circ_g.7 AT3G03380_circ_g.8 AT3G03380_circ_g.10 AT3G03380_circ_g.11 AT3G03380_circ_g.12 AT3G03380_circ_g.13 AT3G03380_circ_g.14 AT3G03380_circ_g.15 AT3G03380_circ_g.16 AT3G03380_circ_g.17 AT3G03380_circ_g.18 AT3G03420_circ_g.1 AT3G03420_circ_g.2 AT3G03420_circ_g.3 AT3G03470_circ_g.1 AT3G03520_circ_g.1 AT3G03520_circ_g.2 AT3G03520_circ_g.3 AT3G03550_circ_g.1 AT3G03560_circ_g.1 AT3G03560_circ_g.2 AT3G03560_circ_g.3 AT3G03560_circ_g.4 AT3G03560_circ_g.5 AT3G03560_circ_g.6 AT3G03560_circ_g.7 AT3G03560_circ_g.8 AT3G03560_circ_g.9 AT3G03560_circ_g.10 AT3G03560_circ_g.11 AT3G03560_circ_g.12 AT3G03560_circ_g.13 AT3G03570_circ_g.1 AT3G03610_circ_g.1 AT3G03610_circ_g.2 AT3G03610_circ_g.3 AT3G03630_circ_g.1 AT3G03640_circ_g.1 AT3G03640_circ_g.2 AT3G03680_circ_g.1 AT3G03680_circ_g.2 AT3G03690_circ_g.1 AT3G03690_circ_g.2 3_circ_ag.3 3_circ_ag.4 3_circ_ag.5 3_circ_ag.6 AT3G03710_circ_g.1 AT3G03710_circ_g.2 AT3G03710_circ_g.3 3_circ_ag.4 AT3G03710_circ_g.5 AT3G03710_circ_g.6 AT3G03710_circ_g.7 AT3G03710_circ_g.8 AT3G03720_circ_g.1 AT3G03720_circ_g.2 AT3G03720_circ_g.3 AT3G03720_circ_g.4 AT3G03720_circ_g.5 AT3G03720_circ_g.6 AT3G03770_circ_g.1 AT3G03770_circ_g.2 AT3G03770_circ_g.3 AT3G03770_circ_g.4 AT3G03773_circ_g.1 AT3G03773_circ_g.2 AT3G03773_circ_g.3 AT3G03780_circ_g.1 AT3G03780_circ_g.2 AT3G03780_circ_g.3 AT3G03780_circ_g.4 AT3G03780_circ_g.5 AT3G03780_circ_g.6 AT3G03780_circ_g.7 AT3G03780_circ_g.8 AT3G03790_circ_g.1 AT3G03790_circ_g.2 AT3G03790_circ_g.3 AT3G03790_circ_g.4 AT3G03790_circ_g.5 AT3G03790_circ_g.6 AT3G03790_circ_g.7 AT3G03810_circ_g.1 AT3G03810_circ_g.2 AT3G03810_circ_g.3 AT3G03860_circ_g.1 AT3G03900_circ_g.1 AT3G03900_circ_g.2 AT3G03920_circ_g.1 AT3G03920_circ_g.2 AT3G03920_circ_g.3 AT3G03920_circ_g.4 AT3G03920_circ_g.5 AT3G03940_circ_g.1 AT3G03940_circ_g.2 AT3G03940_circ_g.3 AT3G03940_circ_g.4 AT3G03940_circ_g.5 AT3G03940_circ_g.6 AT3G03940_circ_g.7 AT3G03940_circ_g.8 AT3G03940_circ_g.9 AT3G03940_circ_g.10 AT3G03940_circ_g.11 AT3G03950_circ_g.1 AT3G03950_circ_g.2 AT3G03950_circ_g.3 AT3G03960_circ_g.1 AT3G03960_circ_g.2 AT3G03960_circ_g.3 AT3G03960_circ_g.4 AT3G03960_circ_g.5 AT3G03960_circ_g.6 AT3G03960_circ_g.7 AT3G03960_circ_g.8 AT3G03960_circ_g.9 AT3G04020_circ_g.1 AT3G04020_circ_g.2 AT3G04020_circ_g.3 AT3G04080_circ_g.1 AT3G04080_circ_g.2 AT3G04080_circ_g.3 AT3G04080_circ_g.4 AT3G04080_circ_g.5 AT3G04090_circ_g.1 AT3G04120_circ_g.1 AT3G04120_circ_g.2 AT3G04120_circ_g.3 AT3G04120_circ_g.4 AT3G04120_circ_g.5 AT3G04120_circ_g.6 AT3G04120_circ_g.7 AT3G04120_circ_g.8 AT3G04120_circ_g.9 AT3G04120_circ_g.10 AT3G04120_circ_g.11 AT3G04120_circ_g.12 AT3G04120_circ_g.13 AT3G04120_circ_g.14 AT3G04120_circ_g.15 AT3G04120_circ_g.16 AT3G04160_circ_g.1 AT3G04220_circ_g.1 AT3G04240_circ_g.1 AT3G04240_circ_g.2 AT3G04240_circ_g.3 AT3G04240_circ_g.4 AT3G04240_circ_g.5 AT3G04240_circ_g.6 AT3G04240_circ_g.7 AT3G04240_circ_g.8 AT3G04240_circ_g.9 AT3G04240_circ_g.10 AT3G04240_circ_g.11 AT3G04240_circ_g.12 AT3G04240_circ_g.13 AT3G04240_circ_g.14 AT3G04240_circ_g.15 AT3G04260_circ_g.1 AT3G04260_circ_g.2 AT3G04260_circ_g.3 AT3G04260_circ_g.4 AT3G04290_circ_g.1 AT3G04290_circ_g.2 AT3G04340_circ_g.1 AT3G04340_circ_g.2 AT3G04340_circ_g.3 AT3G04340_circ_g.4 AT3G04340_circ_g.5 AT3G04340_circ_g.6 AT3G04340_circ_g.7 AT3G04340_circ_g.8 AT3G04340_circ_g.9 AT3G04380_circ_g.1 AT3G04400_circ_g.1 AT3G04400_circ_g.2 AT3G04400_circ_g.3 AT3G04400_circ_g.4 AT3G04420_circ_g.1 AT3G04420_circ_g.2 						
					
						Support reads
						1/1
					
						Tissues
						flower
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT3G03380.1:9
AT3G03380.2:10

General Information
CircRNA Name	AT3G03380_circ_g.9
ID in PlantcircBase	ath_circ_019471
Alias	3:802100-805365
Organism	Arabidpsis thaliana
Position	chr3: 802100-805365 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	find_circ; CIRI2
Parent gene	AT3G03380
Parent gene annotation	Protease Do-like 7
Parent gene strand	+
Alternative splicing	3_circ_ag.3 AT3G03330_circ_g.1 AT3G03330_circ_g.2 AT3G03340_circ_g.1 AT3G03340_circ_g.2 AT3G03340_circ_g.3 AT3G03340_circ_g.4 AT3G03340_circ_g.5 AT3G03340_circ_g.6 AT3G03350_circ_g.1 AT3G03350_circ_g.2 3_circ_ag.3 AT3G03350_circ_g.4 3_circ_ag.5 AT3G03380_circ_g.1 AT3G03380_circ_g.2 AT3G03380_circ_g.3 AT3G03380_circ_g.4 AT3G03380_circ_g.5 AT3G03380_circ_g.6 AT3G03380_circ_g.7 AT3G03380_circ_g.8 AT3G03380_circ_g.10 AT3G03380_circ_g.11 AT3G03380_circ_g.12 AT3G03380_circ_g.13 AT3G03380_circ_g.14 AT3G03380_circ_g.15 AT3G03380_circ_g.16 AT3G03380_circ_g.17 AT3G03380_circ_g.18 AT3G03420_circ_g.1 AT3G03420_circ_g.2 AT3G03420_circ_g.3 AT3G03470_circ_g.1 AT3G03520_circ_g.1 AT3G03520_circ_g.2 AT3G03520_circ_g.3 AT3G03550_circ_g.1 AT3G03560_circ_g.1 AT3G03560_circ_g.2 AT3G03560_circ_g.3 AT3G03560_circ_g.4 AT3G03560_circ_g.5 AT3G03560_circ_g.6 AT3G03560_circ_g.7 AT3G03560_circ_g.8 AT3G03560_circ_g.9 AT3G03560_circ_g.10 AT3G03560_circ_g.11 AT3G03560_circ_g.12 AT3G03560_circ_g.13 AT3G03570_circ_g.1 AT3G03610_circ_g.1 AT3G03610_circ_g.2 AT3G03610_circ_g.3 AT3G03630_circ_g.1 AT3G03640_circ_g.1 AT3G03640_circ_g.2 AT3G03680_circ_g.1 AT3G03680_circ_g.2 AT3G03690_circ_g.1 AT3G03690_circ_g.2 3_circ_ag.3 3_circ_ag.4 3_circ_ag.5 3_circ_ag.6 AT3G03710_circ_g.1 AT3G03710_circ_g.2 AT3G03710_circ_g.3 3_circ_ag.4 AT3G03710_circ_g.5 AT3G03710_circ_g.6 AT3G03710_circ_g.7 AT3G03710_circ_g.8 AT3G03720_circ_g.1 AT3G03720_circ_g.2 AT3G03720_circ_g.3 AT3G03720_circ_g.4 AT3G03720_circ_g.5 AT3G03720_circ_g.6 AT3G03770_circ_g.1 AT3G03770_circ_g.2 AT3G03770_circ_g.3 AT3G03770_circ_g.4 AT3G03773_circ_g.1 AT3G03773_circ_g.2 AT3G03773_circ_g.3 AT3G03780_circ_g.1 AT3G03780_circ_g.2 AT3G03780_circ_g.3 AT3G03780_circ_g.4 AT3G03780_circ_g.5 AT3G03780_circ_g.6 AT3G03780_circ_g.7 AT3G03780_circ_g.8 AT3G03790_circ_g.1 AT3G03790_circ_g.2 AT3G03790_circ_g.3 AT3G03790_circ_g.4 AT3G03790_circ_g.5 AT3G03790_circ_g.6 AT3G03790_circ_g.7 AT3G03810_circ_g.1 AT3G03810_circ_g.2 AT3G03810_circ_g.3 AT3G03860_circ_g.1 AT3G03900_circ_g.1 AT3G03900_circ_g.2 AT3G03920_circ_g.1 AT3G03920_circ_g.2 AT3G03920_circ_g.3 AT3G03920_circ_g.4 AT3G03920_circ_g.5 AT3G03940_circ_g.1 AT3G03940_circ_g.2 AT3G03940_circ_g.3 AT3G03940_circ_g.4 AT3G03940_circ_g.5 AT3G03940_circ_g.6 AT3G03940_circ_g.7 AT3G03940_circ_g.8 AT3G03940_circ_g.9 AT3G03940_circ_g.10 AT3G03940_circ_g.11 AT3G03950_circ_g.1 AT3G03950_circ_g.2 AT3G03950_circ_g.3 AT3G03960_circ_g.1 AT3G03960_circ_g.2 AT3G03960_circ_g.3 AT3G03960_circ_g.4 AT3G03960_circ_g.5 AT3G03960_circ_g.6 AT3G03960_circ_g.7 AT3G03960_circ_g.8 AT3G03960_circ_g.9 AT3G04020_circ_g.1 AT3G04020_circ_g.2 AT3G04020_circ_g.3 AT3G04080_circ_g.1 AT3G04080_circ_g.2 AT3G04080_circ_g.3 AT3G04080_circ_g.4 AT3G04080_circ_g.5 AT3G04090_circ_g.1 AT3G04120_circ_g.1 AT3G04120_circ_g.2 AT3G04120_circ_g.3 AT3G04120_circ_g.4 AT3G04120_circ_g.5 AT3G04120_circ_g.6 AT3G04120_circ_g.7 AT3G04120_circ_g.8 AT3G04120_circ_g.9 AT3G04120_circ_g.10 AT3G04120_circ_g.11 AT3G04120_circ_g.12 AT3G04120_circ_g.13 AT3G04120_circ_g.14 AT3G04120_circ_g.15 AT3G04120_circ_g.16 AT3G04160_circ_g.1 AT3G04220_circ_g.1 AT3G04240_circ_g.1 AT3G04240_circ_g.2 AT3G04240_circ_g.3 AT3G04240_circ_g.4 AT3G04240_circ_g.5 AT3G04240_circ_g.6 AT3G04240_circ_g.7 AT3G04240_circ_g.8 AT3G04240_circ_g.9 AT3G04240_circ_g.10 AT3G04240_circ_g.11 AT3G04240_circ_g.12 AT3G04240_circ_g.13 AT3G04240_circ_g.14 AT3G04240_circ_g.15 AT3G04260_circ_g.1 AT3G04260_circ_g.2 AT3G04260_circ_g.3 AT3G04260_circ_g.4 AT3G04290_circ_g.1 AT3G04290_circ_g.2 AT3G04340_circ_g.1 AT3G04340_circ_g.2 AT3G04340_circ_g.3 AT3G04340_circ_g.4 AT3G04340_circ_g.5 AT3G04340_circ_g.6 AT3G04340_circ_g.7 AT3G04340_circ_g.8 AT3G04340_circ_g.9 AT3G04380_circ_g.1 AT3G04400_circ_g.1 AT3G04400_circ_g.2 AT3G04400_circ_g.3 AT3G04400_circ_g.4 AT3G04420_circ_g.1 AT3G04420_circ_g.2
Support reads	1/1
Tissues	flower
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT3G03380.1:9 AT3G03380.2:10

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGATACTACAGTTTTAAGAGACTTCGAAGGTGCAACAGCACTGTCTGCTAATGCTTCATTGGCT
GAGCGTGCTATTGAGCCTGCACTTGTCATGTTTGAGgttgttagggcgttaagttttctccaaa
aaagcattgactcgcggacggataagccaaaagcagttcatattcctcgtggtacacttcaggt
ttgttttt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1161
Transcript exons: 802100-802189,802632-802697,802792-802848,802972-803037,
803262-803369,803689-803769,804116-804165,804322-804487,
804889-805365
GTTGTTAGGGCGTTAAGTTTTCTCCAAAAAAGCATTGACTCGCGGACGGATAAGCCAAAAGCAG
TTCATATTCCTCGTGGTACACTTCAGATGACATTTCTTCATAAAGGATTCGATGAGATACGGCG
ACTTGGTCTCAGGAGCGAAACTGAACAGGTGGTTCGACATGCATCTCCAACTGGGGAAACAGGA
ATGCTTGTTGTCGATTCTGTGGTGCCAAGTGGCCCTGCTGATAAACATTTGGAGCCGGGAGATG
TTCTTGTTCGGGTGAATGGAACAGTGCTCACACAATTTTTGAACTTGGAGAATCTGCTTGATGA
CGGTGTTGGCCAGATACTTGAATTGGAGATTGAAAGGGGTGGACAACCACTATCTGTTAGTGTA
TCAGTACAAGATTTACACTCAATCACTCCAGATCACTTCCTGGAAGTAAGCGGTGCTGTAATTC
ATCCGTTGTCTTATCAGCAGGCTCGCAATTTTCGTTTTCCTTGTGGCCTGGCTTATGTTGCGGA
CCCTGGATACATGCTATTTAGAGCTGGGGTCCCTCGACATGCTATCATAAAGAAGGTTGCTAAT
GAGGATATTTCCAGTCTTGGAGACTTAGTATCTGTTCTTTCAAAGCTTTCTAGGGGTGCTCGTG
TTCCATTGGAATATATGTCTCACACTGATCGTCATCGCAAGAAGTCTGTGTTAGTCACGATTGA
TCATCATGAATGGTACGCTCCTCCTCAGTTGTATACCCGTAATGACAGTTCCGGTTTATGGGAT
GCGAAACCTGCAATTGAACCTGCTTCTGTTTCACCATCTATTGGTAATAATGGCTTTCCTATAA
GCCAAGATATTTCTCTATGCCATCACGATACGGAACCCATGCATGAAGTGAATGTTCGTGGGGT
TACTGATATTGCAGCGATTATGGAAACTTCTAGTGGGGATGGTTCTCAGAATGATTTTGGCTCA
GAAGCAAAGAAACAAAGAGTTGACGAGGATTCTTCAGATGGGATTGCTGCAAACGGTTCCTTAT
ATGGCAGTGAATTTAAATCTGATGATGCAATGGAAACAGATACTACAGTTTTAAGAGACTTCGA
AGGTGCAACAGCACTGTCTGCTAATGCTTCATTGGCTGAGCGTGCTATTGAGCCTGCACTTGTC
ATGTTTGAG
						
					

						Genomic sequence
						
							GTTGTTAGGGCGTTAAGTTTTCTCCAAAAAAGCATTGACTCGCGGACGGATAAGCCAAAAGCAG
TTCATATTCCTCGTGGTACACTTCAGGTTTGTTTTTCCCTCTCTGATTTTTGAGACTCTTCATA
GTGCCGTTACGAAAATTTCCGCGAATATCAACTTTTGACTCTTTTTTAAATAGCTGGGTTCAGT
TTATTGTCTGAAAAACTACACATACCATTACATGTACATGGTATGTCAATTAAATGTATGCGAT
ATGAATGTTGTGTTCAAATCCTAGAGGGAAAATATATACGTTGAAAATCGTGAATATTACTTGA
TATCTGAATGACCATGGAACTTTGATCTGGACTACTGTGGCTGGTGATAGAAAGAATATCCTTG
GGATCTGAAATAGTTCATGGTTTAATTTCTATTCACTTTCCAACGATTGTTAGATTTGAGATTC
AGAGGAAGTTCAATATCTCTTACTTAATTATTAGTTCTGGGGTTTTCTTATGTAAGCTTTTATC
TGTTTTCTTGTGTACTTTAGATGACATTTCTTCATAAAGGATTCGATGAGATACGGCGACTTGG
TCTCAGGAGCGAAACTGAACAGGTACATACTATTCCTTCTTACCATCATTTAGGGCATCAGCTT
TCCTCGTGATGCTCACTAACACCTTACAAAATGCTATCTCTTGATCGTGTAGGTGGTTCGACAT
GCATCTCCAACTGGGGAAACAGGAATGCTTGTTGTCGATTCTGTGGTGAGTGCATTGCTTTATT
AATAACATTCAATACAATAATTATTTTCAAAGAATATGGCTATTGTTTAAGTGATGGTTAAATT
CGAAACTTTTTATCCTAAATTTGATATGTCGTGATGGTAGGTGCCAAGTGGCCCTGCTGATAAA
CATTTGGAGCCGGGAGATGTTCTTGTTCGGGTGAATGGAACAGTAAGTTGTCTTGATTGCATCT
TCTTAGTGAGAATTTAAATTTTTTTTGCCTCAAGTAATCGAGAATTGTGATATCTTTTGCGGCA
ACATTAGTAAAGAAACGTATTGTTTAGAGATTGGTTATTACCTGGCCACAGAACGTATTAATCA
GTGCACTTAGATTGTCTAGTTCCTTTTTCCTCAGTTTGCTAAATCTTCCTTTATGCGTTTGATT
GTTATTACAGGTGCTCACACAATTTTTGAACTTGGAGAATCTGCTTGATGACGGTGTTGGCCAG
ATACTTGAATTGGAGATTGAAAGGGGTGGACAACCACTATCTGTTAGTGTATCAGTGAGTTCCA
TTCTTCTATTTCTAACTTTGGTTTTATGTTCCTCGTAGTCTTCTAGGATCTTGTGTTTAGTTTC
TGCCCTGTCACATACTGACTAGAAAAGCAGGAGACTATGCAAAGACTAGAAGTAAAATATATGT
AGCCGTCTCTTCTCTTTTATTTTGGTCATTAAATTTGTTCTTGTAGCTCTTTTCGTTTCCCCTG
ATAGATGGAGTTCCTCAATACTTAATTTGCATTTAGAATTCTGCCTTAATGTGATTTATACTTC
CTATCTATCATAAAAATCAAGAGCCTTATGTGTTTGTGTATTTCCTGCCACAGGTACAAGATTT
ACACTCAATCACTCCAGATCACTTCCTGGAAGTAAGCGGTGCTGTAATTCATCCGTTGTCTTAT
CAGCAGGTAACTTAACTATGACTTGAAAAGATATTATCTGGAAATTTCTGTGCCTGCATGCATG
ATATTCTTGTGTCGTACAGGTGGAACTGTTGTGTTTAATTATGGCTTGTAACTATTTAATGTTC
TATTAGTTGGAGAATCATATCAACATGCTAGATATTTTATTCATAATAAATGCTGTGGATCCAC
TTTATCCCCCACACTGTCTTGCTAGATCTGATTATGGAAGCATAACTAAGTGAAATAGTGATGT
GACTACACTACCTCCTGCTAATAAAGAAGCTTACACGTATTTCACTGACACTTTCTTATTGGCA
TTAGCTGATCTTAAAATATTGTGATTTAACAGGCTCGCAATTTTCGTTTTCCTTGTGGCCTGGC
TTATGTTGCGGACCCTGGGTAATTCCCTCTACTTCCGCCATCAAAATTTTCACGTTTTCTTGAT
TTATTTTTGACTGATGTGTCAATATTCTGACATGTGAGCTTATTGTTAATGTAAATGATTACGT
GTCTCTGTATTTCTGGATTTACTTTGAAGAGCTCTTTTCTATTCAGATACATGCTATTTAGAGC
TGGGGTCCCTCGACATGCTATCATAAAGAAGGTTGCTAATGAGGATATTTCCAGTCTTGGAGAC
TTAGTATCTGTTCTTTCAAAGCTTTCTAGGGGTGCTCGTGTTCCATTGGAATATATGTCTCACA
CTGATCGTCATCGCAAGAAGGTGATATTTCTTGTTTAAACAATCTTTTTGCTTAACTTCCTAAC
CCACTGTAAGCATATACTTGTCAAAATTTGATGCTAGCATTTATATATGATATTTTCTTAGGCT
ACTCCATATCAGCATCTTCATTCTTGCAAACAGTTTGTTGATTCTGTGATAATATTACCTCTCT
ACTCGGTGTTCCTAGTGTGTGAAATTTTGTGCTACTGCAGTGCTGCTAGATCTCTGTGATCACT
TTTTACGGAAAACCGTTATCTTTAAGACTATAATTTTCACAACTGTGGATCTTTTTGCGTTAGC
AACGTTCCTGTTATTAACATGCTTGCTTGTCCACGTTTCGTTTTGAACTCTATGTTAATACTCA
AACGAGAAGTACTTATTGTCGGGTTCCATTCCTGCAGTCTGTGTTAGTCACGATTGATCATCAT
GAATGGTACGCTCCTCCTCAGTTGTATACCCGTAATGACAGTTCCGGTTTATGGGATGCGAAAC
CTGCAATTGAACCTGCTTCTGTTTCACCATCTATTGGTAATAATGGCTTTCCTATAAGCCAAGA
TATTTCTCTATGCCATCACGATACGGAACCCATGCATGAAGTGAATGTTCGTGGGGTTACTGAT
ATTGCAGCGATTATGGAAACTTCTAGTGGGGATGGTTCTCAGAATGATTTTGGCTCAGAAGCAA
AGAAACAAAGAGTTGACGAGGATTCTTCAGATGGGATTGCTGCAAACGGTTCCTTATATGGCAG
TGAATTTAAATCTGATGATGCAATGGAAACAGATACTACAGTTTTAAGAGACTTCGAAGGTGCA
ACAGCACTGTCTGCTAATGCTTCATTGGCTGAGCGTGCTATTGAGCCTGCACTTGTCATGTTTG
AG
						
					

			
		

Sequences
Splice junction sequence	AGATACTACAGTTTTAAGAGACTTCGAAGGTGCAACAGCACTGTCTGCTAATGCTTCATTGGCT GAGCGTGCTATTGAGCCTGCACTTGTCATGTTTGAGgttgttagggcgttaagttttctccaaa aaagcattgactcgcggacggataagccaaaagcagttcatattcctcgtggtacacttcaggt ttgttttt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1161 Transcript exons: 802100-802189,802632-802697,802792-802848,802972-803037, 803262-803369,803689-803769,804116-804165,804322-804487, 804889-805365 GTTGTTAGGGCGTTAAGTTTTCTCCAAAAAAGCATTGACTCGCGGACGGATAAGCCAAAAGCAG TTCATATTCCTCGTGGTACACTTCAGATGACATTTCTTCATAAAGGATTCGATGAGATACGGCG ACTTGGTCTCAGGAGCGAAACTGAACAGGTGGTTCGACATGCATCTCCAACTGGGGAAACAGGA ATGCTTGTTGTCGATTCTGTGGTGCCAAGTGGCCCTGCTGATAAACATTTGGAGCCGGGAGATG TTCTTGTTCGGGTGAATGGAACAGTGCTCACACAATTTTTGAACTTGGAGAATCTGCTTGATGA CGGTGTTGGCCAGATACTTGAATTGGAGATTGAAAGGGGTGGACAACCACTATCTGTTAGTGTA TCAGTACAAGATTTACACTCAATCACTCCAGATCACTTCCTGGAAGTAAGCGGTGCTGTAATTC ATCCGTTGTCTTATCAGCAGGCTCGCAATTTTCGTTTTCCTTGTGGCCTGGCTTATGTTGCGGA CCCTGGATACATGCTATTTAGAGCTGGGGTCCCTCGACATGCTATCATAAAGAAGGTTGCTAAT GAGGATATTTCCAGTCTTGGAGACTTAGTATCTGTTCTTTCAAAGCTTTCTAGGGGTGCTCGTG TTCCATTGGAATATATGTCTCACACTGATCGTCATCGCAAGAAGTCTGTGTTAGTCACGATTGA TCATCATGAATGGTACGCTCCTCCTCAGTTGTATACCCGTAATGACAGTTCCGGTTTATGGGAT GCGAAACCTGCAATTGAACCTGCTTCTGTTTCACCATCTATTGGTAATAATGGCTTTCCTATAA GCCAAGATATTTCTCTATGCCATCACGATACGGAACCCATGCATGAAGTGAATGTTCGTGGGGT TACTGATATTGCAGCGATTATGGAAACTTCTAGTGGGGATGGTTCTCAGAATGATTTTGGCTCA GAAGCAAAGAAACAAAGAGTTGACGAGGATTCTTCAGATGGGATTGCTGCAAACGGTTCCTTAT ATGGCAGTGAATTTAAATCTGATGATGCAATGGAAACAGATACTACAGTTTTAAGAGACTTCGA AGGTGCAACAGCACTGTCTGCTAATGCTTCATTGGCTGAGCGTGCTATTGAGCCTGCACTTGTC ATGTTTGAG
Genomic sequence	GTTGTTAGGGCGTTAAGTTTTCTCCAAAAAAGCATTGACTCGCGGACGGATAAGCCAAAAGCAG TTCATATTCCTCGTGGTACACTTCAGGTTTGTTTTTCCCTCTCTGATTTTTGAGACTCTTCATA GTGCCGTTACGAAAATTTCCGCGAATATCAACTTTTGACTCTTTTTTAAATAGCTGGGTTCAGT TTATTGTCTGAAAAACTACACATACCATTACATGTACATGGTATGTCAATTAAATGTATGCGAT ATGAATGTTGTGTTCAAATCCTAGAGGGAAAATATATACGTTGAAAATCGTGAATATTACTTGA TATCTGAATGACCATGGAACTTTGATCTGGACTACTGTGGCTGGTGATAGAAAGAATATCCTTG GGATCTGAAATAGTTCATGGTTTAATTTCTATTCACTTTCCAACGATTGTTAGATTTGAGATTC AGAGGAAGTTCAATATCTCTTACTTAATTATTAGTTCTGGGGTTTTCTTATGTAAGCTTTTATC TGTTTTCTTGTGTACTTTAGATGACATTTCTTCATAAAGGATTCGATGAGATACGGCGACTTGG TCTCAGGAGCGAAACTGAACAGGTACATACTATTCCTTCTTACCATCATTTAGGGCATCAGCTT TCCTCGTGATGCTCACTAACACCTTACAAAATGCTATCTCTTGATCGTGTAGGTGGTTCGACAT GCATCTCCAACTGGGGAAACAGGAATGCTTGTTGTCGATTCTGTGGTGAGTGCATTGCTTTATT AATAACATTCAATACAATAATTATTTTCAAAGAATATGGCTATTGTTTAAGTGATGGTTAAATT CGAAACTTTTTATCCTAAATTTGATATGTCGTGATGGTAGGTGCCAAGTGGCCCTGCTGATAAA CATTTGGAGCCGGGAGATGTTCTTGTTCGGGTGAATGGAACAGTAAGTTGTCTTGATTGCATCT TCTTAGTGAGAATTTAAATTTTTTTTGCCTCAAGTAATCGAGAATTGTGATATCTTTTGCGGCA ACATTAGTAAAGAAACGTATTGTTTAGAGATTGGTTATTACCTGGCCACAGAACGTATTAATCA GTGCACTTAGATTGTCTAGTTCCTTTTTCCTCAGTTTGCTAAATCTTCCTTTATGCGTTTGATT GTTATTACAGGTGCTCACACAATTTTTGAACTTGGAGAATCTGCTTGATGACGGTGTTGGCCAG ATACTTGAATTGGAGATTGAAAGGGGTGGACAACCACTATCTGTTAGTGTATCAGTGAGTTCCA TTCTTCTATTTCTAACTTTGGTTTTATGTTCCTCGTAGTCTTCTAGGATCTTGTGTTTAGTTTC TGCCCTGTCACATACTGACTAGAAAAGCAGGAGACTATGCAAAGACTAGAAGTAAAATATATGT AGCCGTCTCTTCTCTTTTATTTTGGTCATTAAATTTGTTCTTGTAGCTCTTTTCGTTTCCCCTG ATAGATGGAGTTCCTCAATACTTAATTTGCATTTAGAATTCTGCCTTAATGTGATTTATACTTC CTATCTATCATAAAAATCAAGAGCCTTATGTGTTTGTGTATTTCCTGCCACAGGTACAAGATTT ACACTCAATCACTCCAGATCACTTCCTGGAAGTAAGCGGTGCTGTAATTCATCCGTTGTCTTAT CAGCAGGTAACTTAACTATGACTTGAAAAGATATTATCTGGAAATTTCTGTGCCTGCATGCATG ATATTCTTGTGTCGTACAGGTGGAACTGTTGTGTTTAATTATGGCTTGTAACTATTTAATGTTC TATTAGTTGGAGAATCATATCAACATGCTAGATATTTTATTCATAATAAATGCTGTGGATCCAC TTTATCCCCCACACTGTCTTGCTAGATCTGATTATGGAAGCATAACTAAGTGAAATAGTGATGT GACTACACTACCTCCTGCTAATAAAGAAGCTTACACGTATTTCACTGACACTTTCTTATTGGCA TTAGCTGATCTTAAAATATTGTGATTTAACAGGCTCGCAATTTTCGTTTTCCTTGTGGCCTGGC TTATGTTGCGGACCCTGGGTAATTCCCTCTACTTCCGCCATCAAAATTTTCACGTTTTCTTGAT TTATTTTTGACTGATGTGTCAATATTCTGACATGTGAGCTTATTGTTAATGTAAATGATTACGT GTCTCTGTATTTCTGGATTTACTTTGAAGAGCTCTTTTCTATTCAGATACATGCTATTTAGAGC TGGGGTCCCTCGACATGCTATCATAAAGAAGGTTGCTAATGAGGATATTTCCAGTCTTGGAGAC TTAGTATCTGTTCTTTCAAAGCTTTCTAGGGGTGCTCGTGTTCCATTGGAATATATGTCTCACA CTGATCGTCATCGCAAGAAGGTGATATTTCTTGTTTAAACAATCTTTTTGCTTAACTTCCTAAC CCACTGTAAGCATATACTTGTCAAAATTTGATGCTAGCATTTATATATGATATTTTCTTAGGCT ACTCCATATCAGCATCTTCATTCTTGCAAACAGTTTGTTGATTCTGTGATAATATTACCTCTCT ACTCGGTGTTCCTAGTGTGTGAAATTTTGTGCTACTGCAGTGCTGCTAGATCTCTGTGATCACT TTTTACGGAAAACCGTTATCTTTAAGACTATAATTTTCACAACTGTGGATCTTTTTGCGTTAGC AACGTTCCTGTTATTAACATGCTTGCTTGTCCACGTTTCGTTTTGAACTCTATGTTAATACTCA AACGAGAAGTACTTATTGTCGGGTTCCATTCCTGCAGTCTGTGTTAGTCACGATTGATCATCAT GAATGGTACGCTCCTCCTCAGTTGTATACCCGTAATGACAGTTCCGGTTTATGGGATGCGAAAC CTGCAATTGAACCTGCTTCTGTTTCACCATCTATTGGTAATAATGGCTTTCCTATAAGCCAAGA TATTTCTCTATGCCATCACGATACGGAACCCATGCATGAAGTGAATGTTCGTGGGGTTACTGAT ATTGCAGCGATTATGGAAACTTCTAGTGGGGATGGTTCTCAGAATGATTTTGGCTCAGAAGCAA AGAAACAAAGAGTTGACGAGGATTCTTCAGATGGGATTGCTGCAAACGGTTCCTTATATGGCAG TGAATTTAAATCTGATGATGCAATGGAAACAGATACTACAGTTTTAAGAGACTTCGAAGGTGCA ACAGCACTGTCTGCTAATGCTTCATTGGCTGAGCGTGCTATTGAGCCTGCACTTGTCATGTTTG AG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.229349444

Conservation Information
Conserved circRNAs	NA
PMCS	0.229349444

			
						 Functional Information
					
						Coding potential
						NA
					
						Potential coding position
						
							NA
						
						Potential amino acid sequence
						
							NA
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	NA
Potential coding position	NA
Potential amino acid sequence	NA
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Philips et al., 2020

circRNA

Detail information of AT3G03380_circ_g.9

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