Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | BGIOSGA011991_circ_g.14 |
ID in PlantcircBase | osi_circ_013965 |
Alias | Chr03:4276980_4277250(ZS97RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr3: 4732387-4732657 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ei-circRNA |
Identification method | CIRCexplorer2, find_circ |
Parent gene | BGIOSGA011991 |
Parent gene annotation | NA |
Parent gene strand | + |
Alternative splicing | BGIOSGA011991_circ_g.2 BGIOSGA011991_circ_g.3 BGIOSGA011991_circ_g.4 BGIOSGA011991_circ_g.5 BGIOSGA011991_circ_igg.1 BGIOSGA011991_circ_g.2 BGIOSGA011991_circ_g.3 BGIOSGA011991_circ_g.4 BGIOSGA011991_circ_g.5 BGIOSGA011991_circ_igg.6 BGIOSGA011991_circ_g.7 BGIOSGA011991_circ_g.8 BGIOSGA011991_circ_g.9 BGIOSGA011991_circ_g.10 BGIOSGA011991_circ_g.11 BGIOSGA011991_circ_g.12 BGIOSGA011991_circ_g.13 BGIOSGA011991_circ_g.15 BGIOSGA011991_circ_ig.1 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | Yes-No |
Splicing signals | GT-AA |
Number of exons covered | BGIOSGA011991-TA:1 |
Conservation Information | |
---|---|
Conserved circRNAs | osa_circ_018240 |
PMCS |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Zhou et al., 2021 |