Splice junction sequence |
TTGCTTGTAAATTATAGCAAGGTTATTGAACGGAGCAGATAGCCCTGTAGTTACAGCCAGAGTA GCCTTGAATAATGAGGAAGCAGGACCCATCATATTCctatccttgtaagctgaggccaggtttg cgtgagcttcagccattgtaggccggaagtttatagcatgcatgtaatcctgaattgcttcagt taccctcc
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 247 Transcript exons: 1117480-1117680,1117832-1117877 CTATCCTTGTAAGCTGAGGCCAGGTTTGCGTGAGCTTCAGCCATTGTAGGCCGGAAGTTTATAG CATGCATGTAATCCTGAATTGCTTCAGTTACCCTCCCGATCTCTTTGTAAGTATTCCCTCTATT AACCAGAGCGTCAGCTGCCAATGGGTCAATACGAAGAACCTCATTATAGCAGGATATAGCATCC GAGTAATTTAGCCAGAGTAGCCTTGAATAATGAGGAAGCAGGACCCATCATATTC
Transcript length: 306 Transcript exons: 1117480-1117682,1117775-1117877 CTATCCTTGTAAGCTGAGGCCAGGTTTGCGTGAGCTTCAGCCATTGTAGGCCGGAAGTTTATAG CATGCATGTAATCCTGAATTGCTTCAGTTACCCTCCCGATCTCTTTGTAAGTATTCCCTCTATT AACCAGAGCGTCAGCTGCCAATGGGTCAATACGAAGAACCTCATTATAGCAGGATATAGCATCC GAGTAATTTCCCTGTTGCTTGTAAATTATAGCAAGGTTATTGAACGGAGCAGATAGCCCTGTAG TTACAGCCAGAGTAGCCTTGAATAATGAGGAAGCAGGACCCATCATATTC
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Genomic sequence |
CTATCCTTGTAAGCTGAGGCCAGGTTTGCGTGAGCTTCAGCCATTGTAGGCCGGAAGTTTATAG CATGCATGTAATCCTGAATTGCTTCAGTTACCCTCCCGATCTCTTTGTAAGTATTCCCTCTATT AACCAGAGCGTCAGCTGCCAATGGGTCAATACGAAGAACCTCATTATAGCAGGATATAGCATCC GAGTAATTTCCCTGTAGTAAAGGAGAAGAAAACAAGCTAAATTTGTCAAACATGAGCAAGACTA CAAAAATGATTAAAAATTGATAATGGAGCACGTAGCTACCTGTTGCTTGTAAATTATAGCAAGG TTATTGAACGGAGCAGATAGCCCTGTAGTTACAGCCAGAGTAGCCTTGAATAATGAGGAAGCAG GACCCATCATATTC |