Plant Circular RNA Database

Detail information of Os03g0109900_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os03g0109900_circ_g.2
					
						ID in PlantcircBase
						osa_circ_017511
					
						Alias
						Os_ciR1255
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr3: 575482-577030  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, find_circ
					
						Parent gene
						
							Os03g0109900						
					
						Parent gene annotation
						
							Peptidase, trypsin-like serine and cysteine domain containing pr
otein. (Os03t0109900-01);Hypothetical conserved gene. (Os03t0109
900-02);Peptidase cysteine/serine, trypsin-like domain containin
g protein. (Os03t0109900-03)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os03g0108800_circ_ag.1 Os03g0109300_circ_g.1 Os03g0109300_circ_g.2 Os03g0109300_circ_g.3 Os03g0109300_circ_g.4 Os03g0109400_circ_g.1 Os03g0109400_circ_g.2 Os03g0109400_circ_g.3 Os03g0109400_circ_g.4 Os03g0109400_circ_g.5 Os03g0109400_circ_g.6 Os03g0109600_circ_g.1 Os03g0109600_circ_g.2 Os03g0109900_circ_g.1 Os03g0109900_circ_g.3 Os03g0109900_circ_g.4 Os03g0109900_circ_g.5 Os03g0109900_circ_g.6 Os03g0110400_circ_g.1 Os03g0110400_circ_g.2 Os03g0110400_circ_g.3 Os03g0110400_circ_g.4 Os03g0110400_circ_g.5 Os03g0110500_circ_g.1 Os03g0110900_circ_g.1 Os03g0111100_circ_g.1 Os03g0111100_circ_g.2 Os03g0111100_circ_g.3 Os03g0111100_circ_g.4 Os03g0111100_circ_g.5 Os03g0111100_circ_g.6 Os03g0111100_circ_g.7 Os03g0111100_circ_g.8 Os03g0111100_circ_g.9 Os03g0111100_circ_g.10 Os03g0111100_circ_g.11 Os03g0111200_circ_g.1 Os03g0111200_circ_g.2 Os03g0111200_circ_g.3 Os03g0111400_circ_g.1 Os03g0111400_circ_g.2 Os03g0111500_circ_g.1 Os03g0111500_circ_g.2 Os03g0111500_circ_g.3 Os03g0111600_circ_g.1 Os03g0111600_circ_g.2 Os03g0111700_circ_g.1 Os03g0111700_circ_g.2 Os03g0111800_circ_g.1 Os03g0112101_circ_g.1 Os03g0112101_circ_g.2 Os03g0112101_circ_igg.1 Os03g0112101_circ_ig.1 Os03g0112101_circ_ig.2 Os03g0112101_circ_ig.3 Os03g0112101_circ_ig.4 Os03g0112101_circ_ig.5 Os03g0112101_circ_ig.6 Os03g0112101_circ_ig.7 Os03g0112101_circ_ig.8 Os03g0112400_circ_g.1 Os03g0112400_circ_igg.1 EPlOSAG00000048437_circ_ig.1 EPlOSAG00000048437_circ_ig.2 Os03g0112600_circ_ig.1 Os03g0112700_circ_g.1 Os03g0112700_circ_g.2 Os03g0112700_circ_g.3 Os03g0112700_circ_g.4 Os03g0112700_circ_g.5 Os03g0112700_circ_g.6 Os03g0112700_circ_g.7 Os03g0112800_circ_g.1 Os03g0112800_circ_g.2 Os03g0113500_circ_g.1 Os03g0113500_circ_g.2 Os03g0113500_circ_g.3 Os03g0113500_circ_g.4 Os03g0113500_circ_g.5 Os03g0113700_circ_g.1 Os03g0113800_circ_g.1 Os03g0113800_circ_g.2 Os03g0113800_circ_g.3 Os03g0113800_circ_g.4 Os03g0113800_circ_g.5 Os03g0113800_circ_g.6 Os03g0113800_circ_g.7 EPlOSAG00000003330_circ_ig.1 Os03g0114000_circ_g.1 Os03g0114300_circ_g.1 Os03g0114300_circ_g.2 Os03g0114300_circ_g.3 Os03g0114300_circ_g.4 Os03g0114300_circ_g.5 Os03g0114300_circ_g.6 Os03g0114300_circ_g.7 Os03g0114300_circ_g.8 Os03g0114300_circ_g.9 Os03g0114300_circ_g.10 Os03g0114300_circ_g.11 Os03g0115100_circ_g.1 Os03g0115400_circ_g.1 Os03g0115400_circ_g.2 Os03g0115400_circ_ig.1 Os03g0115700_circ_g.1 Os03g0116000_circ_g.1 Os03g0116000_circ_g.2 Os03g0116300_circ_g.1 Os03g0116300_circ_g.2 Os03g0116300_circ_g.3 Os03g0116300_circ_g.4 Os03g0116300_circ_g.5 Os03g0116300_circ_g.6 Os03g0116400_circ_g.1 Os03g0116400_circ_g.2 Os03g0116700_circ_g.1 Os03g0116700_circ_g.2 Os03g0116900_circ_igg.1 Os03g0117100_circ_g.1 Os03g0117100_circ_g.2 Os03g0117100_circ_g.3 Os03g0117100_circ_g.4 Os03g0117800_circ_g.1 Os03g0117800_circ_g.2 Os03g0118400_circ_g.1 						
					
						Support reads
						13/3
					
						Tissues
						root/shoot, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os03t0109900-02:5
Os03t0109900-01:5
Os03t0109900-03:5

General Information
CircRNA Name	Os03g0109900_circ_g.2
ID in PlantcircBase	osa_circ_017511
Alias	Os_ciR1255
Organism	Oryza sativa
Position	chr3: 575482-577030 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, find_circ
Parent gene	Os03g0109900
Parent gene annotation	Peptidase, trypsin-like serine and cysteine domain containing pr otein. (Os03t0109900-01);Hypothetical conserved gene. (Os03t0109 900-02);Peptidase cysteine/serine, trypsin-like domain containin g protein. (Os03t0109900-03)
Parent gene strand	-
Alternative splicing	Os03g0108800_circ_ag.1 Os03g0109300_circ_g.1 Os03g0109300_circ_g.2 Os03g0109300_circ_g.3 Os03g0109300_circ_g.4 Os03g0109400_circ_g.1 Os03g0109400_circ_g.2 Os03g0109400_circ_g.3 Os03g0109400_circ_g.4 Os03g0109400_circ_g.5 Os03g0109400_circ_g.6 Os03g0109600_circ_g.1 Os03g0109600_circ_g.2 Os03g0109900_circ_g.1 Os03g0109900_circ_g.3 Os03g0109900_circ_g.4 Os03g0109900_circ_g.5 Os03g0109900_circ_g.6 Os03g0110400_circ_g.1 Os03g0110400_circ_g.2 Os03g0110400_circ_g.3 Os03g0110400_circ_g.4 Os03g0110400_circ_g.5 Os03g0110500_circ_g.1 Os03g0110900_circ_g.1 Os03g0111100_circ_g.1 Os03g0111100_circ_g.2 Os03g0111100_circ_g.3 Os03g0111100_circ_g.4 Os03g0111100_circ_g.5 Os03g0111100_circ_g.6 Os03g0111100_circ_g.7 Os03g0111100_circ_g.8 Os03g0111100_circ_g.9 Os03g0111100_circ_g.10 Os03g0111100_circ_g.11 Os03g0111200_circ_g.1 Os03g0111200_circ_g.2 Os03g0111200_circ_g.3 Os03g0111400_circ_g.1 Os03g0111400_circ_g.2 Os03g0111500_circ_g.1 Os03g0111500_circ_g.2 Os03g0111500_circ_g.3 Os03g0111600_circ_g.1 Os03g0111600_circ_g.2 Os03g0111700_circ_g.1 Os03g0111700_circ_g.2 Os03g0111800_circ_g.1 Os03g0112101_circ_g.1 Os03g0112101_circ_g.2 Os03g0112101_circ_igg.1 Os03g0112101_circ_ig.1 Os03g0112101_circ_ig.2 Os03g0112101_circ_ig.3 Os03g0112101_circ_ig.4 Os03g0112101_circ_ig.5 Os03g0112101_circ_ig.6 Os03g0112101_circ_ig.7 Os03g0112101_circ_ig.8 Os03g0112400_circ_g.1 Os03g0112400_circ_igg.1 EPlOSAG00000048437_circ_ig.1 EPlOSAG00000048437_circ_ig.2 Os03g0112600_circ_ig.1 Os03g0112700_circ_g.1 Os03g0112700_circ_g.2 Os03g0112700_circ_g.3 Os03g0112700_circ_g.4 Os03g0112700_circ_g.5 Os03g0112700_circ_g.6 Os03g0112700_circ_g.7 Os03g0112800_circ_g.1 Os03g0112800_circ_g.2 Os03g0113500_circ_g.1 Os03g0113500_circ_g.2 Os03g0113500_circ_g.3 Os03g0113500_circ_g.4 Os03g0113500_circ_g.5 Os03g0113700_circ_g.1 Os03g0113800_circ_g.1 Os03g0113800_circ_g.2 Os03g0113800_circ_g.3 Os03g0113800_circ_g.4 Os03g0113800_circ_g.5 Os03g0113800_circ_g.6 Os03g0113800_circ_g.7 EPlOSAG00000003330_circ_ig.1 Os03g0114000_circ_g.1 Os03g0114300_circ_g.1 Os03g0114300_circ_g.2 Os03g0114300_circ_g.3 Os03g0114300_circ_g.4 Os03g0114300_circ_g.5 Os03g0114300_circ_g.6 Os03g0114300_circ_g.7 Os03g0114300_circ_g.8 Os03g0114300_circ_g.9 Os03g0114300_circ_g.10 Os03g0114300_circ_g.11 Os03g0115100_circ_g.1 Os03g0115400_circ_g.1 Os03g0115400_circ_g.2 Os03g0115400_circ_ig.1 Os03g0115700_circ_g.1 Os03g0116000_circ_g.1 Os03g0116000_circ_g.2 Os03g0116300_circ_g.1 Os03g0116300_circ_g.2 Os03g0116300_circ_g.3 Os03g0116300_circ_g.4 Os03g0116300_circ_g.5 Os03g0116300_circ_g.6 Os03g0116400_circ_g.1 Os03g0116400_circ_g.2 Os03g0116700_circ_g.1 Os03g0116700_circ_g.2 Os03g0116900_circ_igg.1 Os03g0117100_circ_g.1 Os03g0117100_circ_g.2 Os03g0117100_circ_g.3 Os03g0117100_circ_g.4 Os03g0117800_circ_g.1 Os03g0117800_circ_g.2 Os03g0118400_circ_g.1
Support reads	13/3
Tissues	root/shoot, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os03t0109900-02:5 Os03t0109900-01:5 Os03t0109900-03:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TAGTGCCCCATGGCAGGAAAAAGGCTCTTCCCATAGCCAAAAAAAGGTTCATGCCAACAAAGTT
CCCATCAAAAGAAAAAAGTGGTGCACCTTCCCAAGCcctcaagttgtcaacaatcttgttctca
tcgccagaacttctaaccaagcttgctgatgtcaaaataactgtagaaccattccattcaacaa
aaaagcct

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 140
Transcript exons: 575482-575596,577006-577030
CCTCAAGTTGTCAACAATCTTGTTCTCATCGCCAGAACTTCTAACCAAGCTTGCTGATGTCAAA
ATAACTGTAGAACCATTCCATTCAACAAAAAAGCCTGTGCATGCAAAAAACAAAAAAGTGGTGC
ACCTTCCCAAGC
Transcript length: 164
Transcript exons: 575482-575537,576923-577030
CCTCAAGTTGTCAACAATCTTGTTCTCATCGCCAGAACTTCTAACCAAGCTTGCTGCTTCTGAA
TAGTGCCCCATGGCAGGAAAAAGGCTCTTCCCATAGCCAAAAAAAGGTTCATGCCAACAAAGTT
CCCATCAAAAGAAAAAAGTGGTGCACCTTCCCAAGC
Transcript length: 555
Transcript exons: 575482-575606,575686-575817,575901-575981,576332-576378,
576861-577030
CCTCAAGTTGTCAACAATCTTGTTCTCATCGCCAGAACTTCTAACCAAGCTTGCTGATGTCAAA
ATAACTGTAGAACCATTCCATTCAACAAAAAAGCCTGTGCATGCAAAAAACCTTCTCTCTCCAC
TGAATGAAGCTAGTGCGACAACACTGCGGTCTATGTTAGAACAAGATTTTTTACTGAGTTTACT
CCATACACCTTCACCACGTAGATCGCCGAAAGTCTCTTCGAAAGTATTAACCAAAATCATCCCA
TCAGCAAACATGTGTGTTGGAAACTTTGGATAGCCCATAGAGTCTATATGAATCTGCTCCGGGT
CGAGAATATCGTTGTTTACTTCTGGATGGCTGTTAGATTTCTCAGCTGTGGAACTTGTTCCAAA
CCTATAAACCTTCAAACTGTTTGACTCTGGAAGTCCCGTCTTGTTTTGCAGGGATGCCCAATGC
TTCTGAATAGTGCCCCATGGCAGGAAAAAGGCTCTTCCCATAGCCAAAAAAAGGTTCATGCCAA
CAAAGTTCCCATCAAAAGAAAAAAGTGGTGCACCTTCCCAAGC
						
					

						Genomic sequence
						
							CCTCAAGTTGTCAACAATCTTGTTCTCATCGCCAGAACTTCTAACCAAGCTTGCTGATGTCAAA
ATAACTGTAGAACCATTCCATTCAACAAAAAAGCCTGTGCATGCAAAAAACCTTCTCTCTCCTG
CATACCAAATCTTGGTAATCAGCTAGCTGTGGTCAAAACAGAGATAAAGTAACTAGCACAATAT
TAGCAAACTCACCACTGAATGAAGCTAGTGCGACAACACTGCGGTCTATGTTAGAACAAGATTT
TTTACTGAGTTTACTCCATACACCTTCACCACGTAGATCGCCGAAAGTCTCTTCGAAAGTATTA
ACCAAAATCATCCCATCTGGTGATAGATACATTATAGCGTAGTTGTTAGTGGTGCAGAAAGCTG
TAAAAGATTAGCAAATTTAAAAGCCAATGACTCACCAGCAAACATGTGTGTTGGAAACTTTGGA
TAGCCCATAGAGTCTATATGAATCTGCTCCGGGTCGAGAATATCGTTGTTTACTGTTGCAATAT
GGTTAAGTGATAAGTACTCACATAAATATGTTACTCCCTCCGTCCCAAAATATAGCAACATGGG
ACCGCATGGGACACATCCTAGTATTAAGAATCTGGACAAAGCTGGGATGCGTCCCATCTAGTCC
TAAGTTGCTATATTTTAGGACGGAGGTAGTAATTAATAAGCACTAATAATATAAGTGAAAGGGC
CAAACTAGTTGATAGTTATTAAGTACAGATATAAAAGCTAAACTTGCACAGCTTGTGAAGACTA
AATAGATATCATTACAATCTGCAACAATTTGTATGTTACCACAATCTTAAGCAGTCTCAAGGCC
ACATGGCTGTGTGCTCACCTTCTGGATGGCTGTTAGATTTCTCAGCTGTGGAACTTGTTCCAAA
CCTGCAGAAGAACATTGGAATGACTACTAACCCAAAAGTAAAATGGATCAAACCAGTGCATTAA
TATGCAAAATGGTGCCAAAACCTACATGGGTAGAATCGTAGGCAAGGAACGAGATAGATAGAAA
TGAAGGCCTGAAGTTGTATGATCCTTCTAGTGTGCACATTGAAGACAAAACAGTTTTAAACATT
GGCATAAGAAACATGACTAATCAACACGTCAACTGTGGTACATGCCCATGGATGGTAAATATTT
TGGTAGAGGTGGCAAAGAAACAAGTTAATATTGAAAGTAGGAATTGAAAATTTGCCAAGCACAG
ATGCCAAAAAAGCTAAGAAACATCAGCTAAAAATCCACATTATTTCATACATATGTTGTCTGGC
ATACAAAAAGGCTTGCTTTATATGCTCATGTAGGGGAAGGGGAGGTGAGATAGAATAGAGTAGG
TGAACTAATGATGAGCATATATCAATAAGACACACCTATAAACCTTCAAACTGTTTGACTCTGG
AAGTCCCGTCTTGTTTTGCAGGGATGCCCAATGCTTCTGAATAGTGCCCCATGGCAGGAAAAAG
GCTCTTCCCATAGCCAAAAAAAGGTTCATGCCAACAAAGTTCCCATCAAAAGAAAAAAGTGGTG
CACCTTCCCAAGC
						
					

			
		

Sequences
Splice junction sequence	TAGTGCCCCATGGCAGGAAAAAGGCTCTTCCCATAGCCAAAAAAAGGTTCATGCCAACAAAGTT CCCATCAAAAGAAAAAAGTGGTGCACCTTCCCAAGCcctcaagttgtcaacaatcttgttctca tcgccagaacttctaaccaagcttgctgatgtcaaaataactgtagaaccattccattcaacaa aaaagcct
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 140 Transcript exons: 575482-575596,577006-577030 CCTCAAGTTGTCAACAATCTTGTTCTCATCGCCAGAACTTCTAACCAAGCTTGCTGATGTCAAA ATAACTGTAGAACCATTCCATTCAACAAAAAAGCCTGTGCATGCAAAAAACAAAAAAGTGGTGC ACCTTCCCAAGC Transcript length: 164 Transcript exons: 575482-575537,576923-577030 CCTCAAGTTGTCAACAATCTTGTTCTCATCGCCAGAACTTCTAACCAAGCTTGCTGCTTCTGAA TAGTGCCCCATGGCAGGAAAAAGGCTCTTCCCATAGCCAAAAAAAGGTTCATGCCAACAAAGTT CCCATCAAAAGAAAAAAGTGGTGCACCTTCCCAAGC Transcript length: 555 Transcript exons: 575482-575606,575686-575817,575901-575981,576332-576378, 576861-577030 CCTCAAGTTGTCAACAATCTTGTTCTCATCGCCAGAACTTCTAACCAAGCTTGCTGATGTCAAA ATAACTGTAGAACCATTCCATTCAACAAAAAAGCCTGTGCATGCAAAAAACCTTCTCTCTCCAC TGAATGAAGCTAGTGCGACAACACTGCGGTCTATGTTAGAACAAGATTTTTTACTGAGTTTACT CCATACACCTTCACCACGTAGATCGCCGAAAGTCTCTTCGAAAGTATTAACCAAAATCATCCCA TCAGCAAACATGTGTGTTGGAAACTTTGGATAGCCCATAGAGTCTATATGAATCTGCTCCGGGT CGAGAATATCGTTGTTTACTTCTGGATGGCTGTTAGATTTCTCAGCTGTGGAACTTGTTCCAAA CCTATAAACCTTCAAACTGTTTGACTCTGGAAGTCCCGTCTTGTTTTGCAGGGATGCCCAATGC TTCTGAATAGTGCCCCATGGCAGGAAAAAGGCTCTTCCCATAGCCAAAAAAAGGTTCATGCCAA CAAAGTTCCCATCAAAAGAAAAAAGTGGTGCACCTTCCCAAGC
Genomic sequence	CCTCAAGTTGTCAACAATCTTGTTCTCATCGCCAGAACTTCTAACCAAGCTTGCTGATGTCAAA ATAACTGTAGAACCATTCCATTCAACAAAAAAGCCTGTGCATGCAAAAAACCTTCTCTCTCCTG CATACCAAATCTTGGTAATCAGCTAGCTGTGGTCAAAACAGAGATAAAGTAACTAGCACAATAT TAGCAAACTCACCACTGAATGAAGCTAGTGCGACAACACTGCGGTCTATGTTAGAACAAGATTT TTTACTGAGTTTACTCCATACACCTTCACCACGTAGATCGCCGAAAGTCTCTTCGAAAGTATTA ACCAAAATCATCCCATCTGGTGATAGATACATTATAGCGTAGTTGTTAGTGGTGCAGAAAGCTG TAAAAGATTAGCAAATTTAAAAGCCAATGACTCACCAGCAAACATGTGTGTTGGAAACTTTGGA TAGCCCATAGAGTCTATATGAATCTGCTCCGGGTCGAGAATATCGTTGTTTACTGTTGCAATAT GGTTAAGTGATAAGTACTCACATAAATATGTTACTCCCTCCGTCCCAAAATATAGCAACATGGG ACCGCATGGGACACATCCTAGTATTAAGAATCTGGACAAAGCTGGGATGCGTCCCATCTAGTCC TAAGTTGCTATATTTTAGGACGGAGGTAGTAATTAATAAGCACTAATAATATAAGTGAAAGGGC CAAACTAGTTGATAGTTATTAAGTACAGATATAAAAGCTAAACTTGCACAGCTTGTGAAGACTA AATAGATATCATTACAATCTGCAACAATTTGTATGTTACCACAATCTTAAGCAGTCTCAAGGCC ACATGGCTGTGTGCTCACCTTCTGGATGGCTGTTAGATTTCTCAGCTGTGGAACTTGTTCCAAA CCTGCAGAAGAACATTGGAATGACTACTAACCCAAAAGTAAAATGGATCAAACCAGTGCATTAA TATGCAAAATGGTGCCAAAACCTACATGGGTAGAATCGTAGGCAAGGAACGAGATAGATAGAAA TGAAGGCCTGAAGTTGTATGATCCTTCTAGTGTGCACATTGAAGACAAAACAGTTTTAAACATT GGCATAAGAAACATGACTAATCAACACGTCAACTGTGGTACATGCCCATGGATGGTAAATATTT TGGTAGAGGTGGCAAAGAAACAAGTTAATATTGAAAGTAGGAATTGAAAATTTGCCAAGCACAG ATGCCAAAAAAGCTAAGAAACATCAGCTAAAAATCCACATTATTTCATACATATGTTGTCTGGC ATACAAAAAGGCTTGCTTTATATGCTCATGTAGGGGAAGGGGAGGTGAGATAGAATAGAGTAGG TGAACTAATGATGAGCATATATCAATAAGACACACCTATAAACCTTCAAACTGTTTGACTCTGG AAGTCCCGTCTTGTTTTGCAGGGATGCCCAATGCTTCTGAATAGTGCCCCATGGCAGGAAAAAG GCTCTTCCCATAGCCAAAAAAAGGTTCATGCCAACAAAGTTCCCATCAAAAGAAAAAAGTGGTG CACCTTCCCAAGC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.361270024

Conservation Information
Conserved circRNAs	NA
PMCS	0.361270024

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							576921-575535(+)
576982-575929(+)
576984-575484(-)
						
						Potential amino acid sequence
						
							MLLNSAPWQEKGSSHSQKKVHANKVPIKRKKWCTFPSPQVVNNLVLIARTSNQAC*(+)
MPTKFPSKEKSGAPSQALKLSTILFSSPELLTKLADVKITVEPFHSTKKPVHAKNLLSPLNEAS
ATTLRSMLEQDFLLSLLHTPSPRRSPKVSSKVLTKIIPSANMCVGNFG*(+)
MNLFLAMGRAFFLPWGTIQKHWASLQNKTGLPESNSLKVYRFGTSSTAEKSNSHPEVNNDILDP
EQIHIDSMGYPKFPTHMFADGMILVNTFEETFGDLRGEGVWSKLSKKSCSNIDRSVVALASFSG
ERRFFACTGFFVEWNGSTVILTSASLVRSSGDENKIVDNLRAWEGAPLFSFDGNFVGMNLFLAM
GRAFFLPWGTIQKHWASLQNKTGLPESNSLKVYRFGTSSTAEKSNSHPEVNNDILDPEQIHIDS
MGYPKFPTHMFADGMILVNTFEETFGDLRGEGVWSKLSKKSCSNIDRSVVALASFSGERRFFAC
TGFFVEWNGSTVILTSASLVRSSGDENKIVDNLRAWEGAPLFSFDGNFVGMNLFLAMGRAFFLP
WGTIQKHWASLQNKTGLPESNSLKVYRFGTSSTAEKSNSHPEVNNDILDPEQIHIDSMGYPKFP
THMFADGMILVNTFEETFGDLRGEGVWSKLSKKSCSNIDRSVVALASFSGERRFFACTGFFVEW
NGSTVILTSASLVRSSGDENKIVDNLRAWEGAPLFSFDGNFVGMNLFLAMGRAFFLPWGTIQKH
WASLQNKTGLPESNSLKVYRFGTSSTAEKSNSHPEVNNDILDPEQIHIDSMGYPKFPTHMFADG
MILVNTFEETFGDLRGEGVWSKLSKKSCSNIDRSVVALASFSGERRFFACTGFFVEWNGSTVIL
TSASLVRSSGDENKIVDNLR(-)
						
						Sponge-miRNAs
						
							osa-miR396d 						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	576921-575535(+) 576982-575929(+) 576984-575484(-)
Potential amino acid sequence	MLLNSAPWQEKGSSHSQKKVHANKVPIKRKKWCTFPSPQVVNNLVLIARTSNQAC(+) MPTKFPSKEKSGAPSQALKLSTILFSSPELLTKLADVKITVEPFHSTKKPVHAKNLLSPLNEAS ATTLRSMLEQDFLLSLLHTPSPRRSPKVSSKVLTKIIPSANMCVGNFG(+) MNLFLAMGRAFFLPWGTIQKHWASLQNKTGLPESNSLKVYRFGTSSTAEKSNSHPEVNNDILDP EQIHIDSMGYPKFPTHMFADGMILVNTFEETFGDLRGEGVWSKLSKKSCSNIDRSVVALASFSG ERRFFACTGFFVEWNGSTVILTSASLVRSSGDENKIVDNLRAWEGAPLFSFDGNFVGMNLFLAM GRAFFLPWGTIQKHWASLQNKTGLPESNSLKVYRFGTSSTAEKSNSHPEVNNDILDPEQIHIDS MGYPKFPTHMFADGMILVNTFEETFGDLRGEGVWSKLSKKSCSNIDRSVVALASFSGERRFFAC TGFFVEWNGSTVILTSASLVRSSGDENKIVDNLRAWEGAPLFSFDGNFVGMNLFLAMGRAFFLP WGTIQKHWASLQNKTGLPESNSLKVYRFGTSSTAEKSNSHPEVNNDILDPEQIHIDSMGYPKFP THMFADGMILVNTFEETFGDLRGEGVWSKLSKKSCSNIDRSVVALASFSGERRFFACTGFFVEW NGSTVILTSASLVRSSGDENKIVDNLRAWEGAPLFSFDGNFVGMNLFLAMGRAFFLPWGTIQKH WASLQNKTGLPESNSLKVYRFGTSSTAEKSNSHPEVNNDILDPEQIHIDSMGYPKFPTHMFADG MILVNTFEETFGDLRGEGVWSKLSKKSCSNIDRSVVALASFSGERRFFACTGFFVEWNGSTVIL TSASLVRSSGDENKIVDNLR(-)
Sponge-miRNAs	osa-miR396d
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os03g0109900_circ_g.2

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