Plant Circular RNA Database

Detail information of AT4G14160_circ_g.3

			
						 General Information
					
						CircRNA Name
						AT4G14160_circ_g.3
					
						ID in PlantcircBase
						ath_circ_030843
					
						Alias
						Ath_circ_FC2638
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr4: 8168487-8172352  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							AT4G14160						
					
						Parent gene annotation
						
							Sec23/Sec24 protein transport family protein
							
						Parent gene strand
						+
					
						Alternative splicing
						
							AT4G14160_circ_g.2 AT4G14160_circ_g.4 AT4G14160_circ_g.5 AT4G14160_circ_g.6 AT4G14160_circ_g.7 AT4G14160_circ_g.8 AT4G14160_circ_g.9 AT4G14160_circ_g.10 AT4G14160_circ_g.11 AT4G14160_circ_g.12 AT4G14160_circ_g.13 AT4G14160_circ_g.14 AT4G14160_circ_g.15 AT4G14160_circ_g.16 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT4G14160.3:9
AT4G14160.1:9
AT4G14160.2:9

General Information
CircRNA Name	AT4G14160_circ_g.3
ID in PlantcircBase	ath_circ_030843
Alias	Ath_circ_FC2638
Organism	Arabidpsis thaliana
Position	chr4: 8168487-8172352 JBrowse»
Reference genome	TAIR10.38
Type	ue-circRNA
Identification method	CIRCexplorer
Parent gene	AT4G14160
Parent gene annotation	Sec23/Sec24 protein transport family protein
Parent gene strand	+
Alternative splicing	AT4G14160_circ_g.2 AT4G14160_circ_g.4 AT4G14160_circ_g.5 AT4G14160_circ_g.6 AT4G14160_circ_g.7 AT4G14160_circ_g.8 AT4G14160_circ_g.9 AT4G14160_circ_g.10 AT4G14160_circ_g.11 AT4G14160_circ_g.12 AT4G14160_circ_g.13 AT4G14160_circ_g.14 AT4G14160_circ_g.15 AT4G14160_circ_g.16
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT4G14160.3:9 AT4G14160.1:9 AT4G14160.2:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GATTCTTCTATTAGATGCATATTTTAGTGTTGTTGTCTTCCATGGAATGACTATATCGCAATGG
CGAAACATGGGTTATCATCATCAGCCTGAACATGAGcttttggatgagctccaatcagaccagt
ggcctgttcagccaggtcatcgtccccaacgatgcacaggggttgcattgagtgtagctgcagg
attgcttg

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTTTTGGATGAGCTCCAATCAGACCAGTGGCCTGTTCAGCCAGGTCATCGTCCCCAACGATGCA
CAGGGGTTGCATTGAGTGTAGCTGCAGGATTGCTTGGAGCTTGCTTACCTGGAACTGGTGCTAG
AATTGTAGCTTTGGTTGGAGGTCCATGTACAGAGGGCCCTGGAACGGTTAGTGCTTATTGATTC
CTCGGTTGATGGCACTCTCAAGTTTTATCGCTCCATATTTTGAACCATATTTGTTATATTCTGA
ATCAAATTTTCTTTCTTTTGTCTTTTCAGATTATCTCAAAGGATTTGTCAGATCCTGTGCGCTC
CCACAAAGATCTAGATAAAGATGCTGCTCCTTATTATAAAAAAGCTGTAAAGTTTTATGATAGT
ATTGCAAAGCAGCTTGTCGCTCAGGGTCATGTGTTAGACCTTTTCGCTTCTGCACTTGATCAGG
TATTAATTGTCGTGATTATAGTTTGCTTGTTGGCATGATGCCCAACCTCTGGTTTTGTTCTTCA
GGTATAAATGTGTAGTTTCTTGCAATGCTTGATTTTTCAATTTTGTCTATGTCGCTGTTATATT
TTAGCTAAAATGAATGCCATGCCTCATTAACTCTCTGAAAGTGTTGTTTTATGTGTATGATCTT
GAATATGTATTCTTAGTTACTAAATTGTTAGGTGAATTTGACATTGTTGATGCACACCAATTGT
GAAAGCTCTTACTTGTACTCGAGTTGTTTAACTAACCTGTGATCACCAGTTTCTATTCTTTTCC
TTCTGATTATTTTTGCAGATGTTAGTAGTTGCGCACGAAAGAGCGTCCATTTGTAGATATCTGT
TACATACATTTTGAAATTTTGAAGGGCAATCTATGTGATTGTTTTAGAACATCCCTTTAATCTA
GAAATCAGAATTGTTTCTTTTAACACTATAGAAAATATGCTTTCCCAAGCCATATCAGAAACCC
CCGCTTTTCTATTCACATTGTTTTCCTTTGCCTCATGAAAGACGTATTATATCAATACCATGTT
TTCTTTTTAACTTCAGTGTTGATAGGCTTTGCTTGTTGTATCTATCAAAAAATTCCACTTTAGC
TATCATTTCCATCACATGATACGATACCTAACTATAATTGTTTCTGCTGTTGCATTTTGGGTAT
AGTTAGGTCGGGGTTGCTGAAATGAAAGTAGCCGTTGAAAGTACCGGTGGTCTCGTTGTTCTGT
CTGAAAGTTTTGGCCATTCTGTATTTAAAGATTCCTTTAAGAGGATGTTTGAAGATGGCGAGCA
CTCTCTTGGTCTCTGCTTCAAGTATGTTTCTGCTCTGCTTCTGTGTCAACACTTTGCTATTATA
TCTTCTGTTGAGTTGGTGTTGCAAGATAAATAATATTTTGGCAATTAAGACCCTTTCTTGTAGA
GCATTATGCATAATACTGCTTGTATGCTATGATAATATATATTTTGCATTCCTTAGTGCAAACT
AACTCCGAACCTTTCATTTTCAGTGGCACGCTTGAGATAAATTGTTCAAAAGACATCAAAATTC
AAGGGGTTATCGGGCCTTGCTCATCATTAGAAAAGGTTTTACCTGGAGTGCTTAGAATCCATTT
TATTTCAAGATGTATTTTTAATGCTTGGTGAATGAATAAAGCTATCTGCTATTAATTGATTTTA
ATTTATTTTCATTTGATGCCTTGCAGAAAGGTCCCAATGTTGCTGACACAGTCATTGGAGAGGG
GAATACCAGTGCTTGGAAATTGTGTGGCCTCGACAAGAGTACCTGCTTGACTGTATTCTTTGAT
CTATCTTCAACCGGGTCAACTGCTCCTGGAGCTTTAAATCAGCAGTTGTATTTGCAGTTTATCA
CAAGGTATTCTTGCAGCTTTTGTTTGTCTCTAATTTTCCTTCATTTGTTAAACTTTTTATCTGT
CTGCATTAAGCTATTACTTTATATCTAGAAGCATTGGATTTACTGTTGTTGACTCGATTGCAGA
TACCAAAACTCTGAAGGTAAAAGTTTGGCCCGGGTTACAACTTTAACCAGACAGTGGGTAGATA
CTGCTGTGAGCACAGAGGTAGTCTTGTTTTCTGCCAAACTTACCACTTTATACAAATGTTATAC
GCAATTGGGTTTATATGTAATCTACTAGCTCTTTTACCGTAGCACTGTTTATTATGTTTTGGTA
GCGTTGCTATGTTAGGATTATAATCTATAACTCTGCTAGCAAGTATTATTATTTGCCAAGTGAA
AATGCGGTTAACGATAGTAACCTTTTTTTTTTTTTGTTAACGATAGTATTGTTAAGCATGGTAT
CATTTTTTGTTCTCATTTTGGTCAACCAAAAATTAATTTCCATTTCTCACTGGTGTAATTTAGT
AAAAGCTATTTACTGTGAATAGAAAGCAAAAAAAGCTTTGGTTTTTGGGATTTCAACGGGACTT
ACATCTTTCTTTCTTGGAAAAATTTGTTTGTTAGGATAAACATGGATCCCTTAAATACCGTTAC
TGTATAACATACTATGATTCCTAATGCTTTATTTTATATGATTCCTAATCCTTAGCCTCCCATG
AGTGTTTTGCGGCAAATTCATATCATGTGAATCTCAGAATCATGATGTTGGTTGCATGATTTTG
ACATATTATCCACATGTTAATGCTAGTACCAGCTTGATAGCCAATTTCTTTTACATTTTACTAT
TGTCATGGAATCAATAATAACCGTGGTCAGGGTTATGTGCCATTCATGTAAATGTGTTATGGTG
TTCAAATAGTTTTCTGGCAAGCAAACATTTTCTTACCATGGTTGCTGTATACATTCTCAGAATC
TTGTGCAAGGCTTTGACCAAGAAACTGCTGCAGTGGTTATGGCAAGATTAACTTCCTTAAAAAT
GGAAACAGAGGTACCTTACATCATCTTTTCTTTGCTTACAATATGTGAGTTAATTTGACCGTGA
CTTAAATTTTTTGTGCTGTTGGGGTAAGGGTTAAGCTCATATTGCTTTTGATGAATTAAAATAT
GGGTTCTTTTCTCCTGGCCATATTTATTTACCTAGGGTTCAGGATCTTTGGCCAAATGTTCATC
TATATGTCCAAAGGAAGTAAAACTTTACTTTTCCCACAACTAATTGAGGTGGATTACAGTTGTC
CCTGTAGCATCTTGTTTGAGGAACTATTGTGGCTGTATGAGATGTAGCTTTCATCTCTTTATAC
CAATAATTTGTAGTCTGTGTGAGGCTCATAGTGAAACTCTAAGTAACAGTTGCTATATACTCAT
GTCTTGTACTTTGTTTAGTGATGTCTACTTTATTTTTGTCATATACTCACGTATGCAGTGTATT
ATGTATAACCTCAGGAGGGATTTGATGCAACTCGGTGGCTAGATCGGACTCTCATTCGTCTGTG
TTCAAAATTTGGTGAATATAGAAAGGATGATCCAACCTCGTTTACGCTGAAACCATATCTTACA
TTGTTCCCTCAATTCATGTTTAACCTGAGGCGGTCACAGTTTGTTCAGGTAGACTACCGTTTTT
AGATTTCATCAATATCTGCCTTTATGTAATTGGCCTACATAGTTGAATCATGTTTTCTTTTGCG
GTGTTGGAATGGTGGCAGGTCTTTAACAATAGTCCTGATGAAACCGCATACTTCCGCATGTTGC
TAAACCGGGAAAACATTTCAAATGCAATTGTCATGATCCAACCTTCTCTGACGTCATATTCATT
CAATTCAGGACCTCAGGCAGCTTTGCTGGATGTGGCTTCCATTGCAGCTGACAAGATTCTTCTA
TTAGATGCATATTTTAGTGTTGTTGTCTTCCATGGAATGACTATATCGCAATGGCGAAACATGG
GTTATCATCATCAGCCTGAACATGAG
						
					

			
		

Sequences
Splice junction sequence	GATTCTTCTATTAGATGCATATTTTAGTGTTGTTGTCTTCCATGGAATGACTATATCGCAATGG CGAAACATGGGTTATCATCATCAGCCTGAACATGAGcttttggatgagctccaatcagaccagt ggcctgttcagccaggtcatcgtccccaacgatgcacaggggttgcattgagtgtagctgcagg attgcttg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTTTTGGATGAGCTCCAATCAGACCAGTGGCCTGTTCAGCCAGGTCATCGTCCCCAACGATGCA CAGGGGTTGCATTGAGTGTAGCTGCAGGATTGCTTGGAGCTTGCTTACCTGGAACTGGTGCTAG AATTGTAGCTTTGGTTGGAGGTCCATGTACAGAGGGCCCTGGAACGGTTAGTGCTTATTGATTC CTCGGTTGATGGCACTCTCAAGTTTTATCGCTCCATATTTTGAACCATATTTGTTATATTCTGA ATCAAATTTTCTTTCTTTTGTCTTTTCAGATTATCTCAAAGGATTTGTCAGATCCTGTGCGCTC CCACAAAGATCTAGATAAAGATGCTGCTCCTTATTATAAAAAAGCTGTAAAGTTTTATGATAGT ATTGCAAAGCAGCTTGTCGCTCAGGGTCATGTGTTAGACCTTTTCGCTTCTGCACTTGATCAGG TATTAATTGTCGTGATTATAGTTTGCTTGTTGGCATGATGCCCAACCTCTGGTTTTGTTCTTCA GGTATAAATGTGTAGTTTCTTGCAATGCTTGATTTTTCAATTTTGTCTATGTCGCTGTTATATT TTAGCTAAAATGAATGCCATGCCTCATTAACTCTCTGAAAGTGTTGTTTTATGTGTATGATCTT GAATATGTATTCTTAGTTACTAAATTGTTAGGTGAATTTGACATTGTTGATGCACACCAATTGT GAAAGCTCTTACTTGTACTCGAGTTGTTTAACTAACCTGTGATCACCAGTTTCTATTCTTTTCC TTCTGATTATTTTTGCAGATGTTAGTAGTTGCGCACGAAAGAGCGTCCATTTGTAGATATCTGT TACATACATTTTGAAATTTTGAAGGGCAATCTATGTGATTGTTTTAGAACATCCCTTTAATCTA GAAATCAGAATTGTTTCTTTTAACACTATAGAAAATATGCTTTCCCAAGCCATATCAGAAACCC CCGCTTTTCTATTCACATTGTTTTCCTTTGCCTCATGAAAGACGTATTATATCAATACCATGTT TTCTTTTTAACTTCAGTGTTGATAGGCTTTGCTTGTTGTATCTATCAAAAAATTCCACTTTAGC TATCATTTCCATCACATGATACGATACCTAACTATAATTGTTTCTGCTGTTGCATTTTGGGTAT AGTTAGGTCGGGGTTGCTGAAATGAAAGTAGCCGTTGAAAGTACCGGTGGTCTCGTTGTTCTGT CTGAAAGTTTTGGCCATTCTGTATTTAAAGATTCCTTTAAGAGGATGTTTGAAGATGGCGAGCA CTCTCTTGGTCTCTGCTTCAAGTATGTTTCTGCTCTGCTTCTGTGTCAACACTTTGCTATTATA TCTTCTGTTGAGTTGGTGTTGCAAGATAAATAATATTTTGGCAATTAAGACCCTTTCTTGTAGA GCATTATGCATAATACTGCTTGTATGCTATGATAATATATATTTTGCATTCCTTAGTGCAAACT AACTCCGAACCTTTCATTTTCAGTGGCACGCTTGAGATAAATTGTTCAAAAGACATCAAAATTC AAGGGGTTATCGGGCCTTGCTCATCATTAGAAAAGGTTTTACCTGGAGTGCTTAGAATCCATTT TATTTCAAGATGTATTTTTAATGCTTGGTGAATGAATAAAGCTATCTGCTATTAATTGATTTTA ATTTATTTTCATTTGATGCCTTGCAGAAAGGTCCCAATGTTGCTGACACAGTCATTGGAGAGGG GAATACCAGTGCTTGGAAATTGTGTGGCCTCGACAAGAGTACCTGCTTGACTGTATTCTTTGAT CTATCTTCAACCGGGTCAACTGCTCCTGGAGCTTTAAATCAGCAGTTGTATTTGCAGTTTATCA CAAGGTATTCTTGCAGCTTTTGTTTGTCTCTAATTTTCCTTCATTTGTTAAACTTTTTATCTGT CTGCATTAAGCTATTACTTTATATCTAGAAGCATTGGATTTACTGTTGTTGACTCGATTGCAGA TACCAAAACTCTGAAGGTAAAAGTTTGGCCCGGGTTACAACTTTAACCAGACAGTGGGTAGATA CTGCTGTGAGCACAGAGGTAGTCTTGTTTTCTGCCAAACTTACCACTTTATACAAATGTTATAC GCAATTGGGTTTATATGTAATCTACTAGCTCTTTTACCGTAGCACTGTTTATTATGTTTTGGTA GCGTTGCTATGTTAGGATTATAATCTATAACTCTGCTAGCAAGTATTATTATTTGCCAAGTGAA AATGCGGTTAACGATAGTAACCTTTTTTTTTTTTTGTTAACGATAGTATTGTTAAGCATGGTAT CATTTTTTGTTCTCATTTTGGTCAACCAAAAATTAATTTCCATTTCTCACTGGTGTAATTTAGT AAAAGCTATTTACTGTGAATAGAAAGCAAAAAAAGCTTTGGTTTTTGGGATTTCAACGGGACTT ACATCTTTCTTTCTTGGAAAAATTTGTTTGTTAGGATAAACATGGATCCCTTAAATACCGTTAC TGTATAACATACTATGATTCCTAATGCTTTATTTTATATGATTCCTAATCCTTAGCCTCCCATG AGTGTTTTGCGGCAAATTCATATCATGTGAATCTCAGAATCATGATGTTGGTTGCATGATTTTG ACATATTATCCACATGTTAATGCTAGTACCAGCTTGATAGCCAATTTCTTTTACATTTTACTAT TGTCATGGAATCAATAATAACCGTGGTCAGGGTTATGTGCCATTCATGTAAATGTGTTATGGTG TTCAAATAGTTTTCTGGCAAGCAAACATTTTCTTACCATGGTTGCTGTATACATTCTCAGAATC TTGTGCAAGGCTTTGACCAAGAAACTGCTGCAGTGGTTATGGCAAGATTAACTTCCTTAAAAAT GGAAACAGAGGTACCTTACATCATCTTTTCTTTGCTTACAATATGTGAGTTAATTTGACCGTGA CTTAAATTTTTTGTGCTGTTGGGGTAAGGGTTAAGCTCATATTGCTTTTGATGAATTAAAATAT GGGTTCTTTTCTCCTGGCCATATTTATTTACCTAGGGTTCAGGATCTTTGGCCAAATGTTCATC TATATGTCCAAAGGAAGTAAAACTTTACTTTTCCCACAACTAATTGAGGTGGATTACAGTTGTC CCTGTAGCATCTTGTTTGAGGAACTATTGTGGCTGTATGAGATGTAGCTTTCATCTCTTTATAC CAATAATTTGTAGTCTGTGTGAGGCTCATAGTGAAACTCTAAGTAACAGTTGCTATATACTCAT GTCTTGTACTTTGTTTAGTGATGTCTACTTTATTTTTGTCATATACTCACGTATGCAGTGTATT ATGTATAACCTCAGGAGGGATTTGATGCAACTCGGTGGCTAGATCGGACTCTCATTCGTCTGTG TTCAAAATTTGGTGAATATAGAAAGGATGATCCAACCTCGTTTACGCTGAAACCATATCTTACA TTGTTCCCTCAATTCATGTTTAACCTGAGGCGGTCACAGTTTGTTCAGGTAGACTACCGTTTTT AGATTTCATCAATATCTGCCTTTATGTAATTGGCCTACATAGTTGAATCATGTTTTCTTTTGCG GTGTTGGAATGGTGGCAGGTCTTTAACAATAGTCCTGATGAAACCGCATACTTCCGCATGTTGC TAAACCGGGAAAACATTTCAAATGCAATTGTCATGATCCAACCTTCTCTGACGTCATATTCATT CAATTCAGGACCTCAGGCAGCTTTGCTGGATGTGGCTTCCATTGCAGCTGACAAGATTCTTCTA TTAGATGCATATTTTAGTGTTGTTGTCTTCCATGGAATGACTATATCGCAATGGCGAAACATGG GTTATCATCATCAGCCTGAACATGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.11241422

Conservation Information
Conserved circRNAs	NA
PMCS	0.11241422

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							8169660-8172349(+)
						
					

						Potential amino acid sequence
						
							MKVAVESTGGLVVLSESFGHSVFKDSFKRMFEDGEHSLGLCFNGTLEINCSKDIKIQGVIGPCS
SLEKKGPNVADTVIGEGNTSAWKLCGLDKSTCLTVFFDLSSTGSTAPGALNQQLYLQFITRYQN
SEGKSLARVTTLTRQWVDTAVSTENLVQGFDQETAAVVMARLTSLKMETEEGFDATRWLDRTLI
RLCSKFGEYRKDDPTSFTLKPYLTLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENISNA
IVMIQPSLTSYSFNSGPQAALLDVASIAADKILLLDAYFSVVVFHGMTISQWRNMGYHHQPEHE
LLDELQSDQWPVQPGHRPQRCTGVALSVAAGLLGACLPGTGARIVALVGGPCTEGPGTIISKDL
SDPVRSHKDLDKDAAPYYKKAVKFYDSIAKQLVAQGHVLDLFASALDQVGVAEMKVAVESTGGL
VVLSESFGHSVFKDSFKRMFEDGEHSLGLCFNGTLEINCSKDIKIQGVIGPCSSLEKKGPNVAD
TVIGEGNTSAWKLCGLDKSTCLTVFFDLSSTGSTAPGALNQQLYLQFITRYQNSEGKSLARVTT
LTRQWVDTAVSTENLVQGFDQETAAVVMARLTSLKMETEEGFDATRWLDRTLIRLCSKFGEYRK
DDPTSFTLKPYLTLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENISNAIVMIQPSLTSY
SFNSGPQAALLDVASIAADKILLLDAYFSVVVFHGMTISQWRNMGYHHQPEHELLDELQSDQWP
VQPGHRPQRCTGVALSVAAGLLGACLPGTGARIVALVGGPCTEGPGTIISKDLSDPVRSHKDLD
KDAAPYYKKAVKFYDSIAKQLVAQGHVLDLFASALDQVGVAEMKVAVESTGGLVVLSESFGHSV
FKDSFKRMFEDGEHSLGLCFNGTLEINCSKDIKIQGVIGPCSSLEKKGPNVADTVIGEGNTSAW
KLCGLDKSTCLTVFFDLSSTGSTAPGALNQQLYLQFITRYQNSEGKSLARVTTLTRQWVDTAVS
TENLVQGFDQETAAVVMARLTSLKMETEEGFDATRWLDRTLIRLCSKFGEYRKDDPTSFTLKPY
LTLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENISNAIVMIQPSLTSYSFNSGPQAALL
DVASIAADKILLLDAYFSVVVFHGMTISQWRNMGYHHQPEHELLDELQSDQWPVQPGHRPQRCT
GVALSVAAGLLGACLPGTGARIVALVGGPCTEGPGTIISKDLSDPVRSHKDLDKDAAPYYKKAV
KFYDSIAKQLVAQGHVLDLFASALDQVGVAEMKVAVESTGGLVVLSESFGHSVFKDSFKRMFED
GEHSLGLCFNGTLEINCSKDIKIQGVIGPCSSLEKKGPNVADTVIGEGNTSAWKLCGLDKSTCL
TVFFDLSSTGSTAPGALNQQLYLQFITRYQNSEGKSLARVTTLTRQWVDTAVSTENLVQGFDQE
TAAVVMARLTSLKMETEEGFDATRWLDRTLIRLCSKFGEYRKDDPTSFTLKPYLTLFPQFMFNL
RRSQFVQVFNNSPDETAYFRMLLNRENISNAIVMIQPSLTSYSFNSGPQAALLDVASIAADKIL
LLDAYFSVVVFHGMTISQWRNMGYHHQPEHE(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	8169660-8172349(+)
Potential amino acid sequence	MKVAVESTGGLVVLSESFGHSVFKDSFKRMFEDGEHSLGLCFNGTLEINCSKDIKIQGVIGPCS SLEKKGPNVADTVIGEGNTSAWKLCGLDKSTCLTVFFDLSSTGSTAPGALNQQLYLQFITRYQN SEGKSLARVTTLTRQWVDTAVSTENLVQGFDQETAAVVMARLTSLKMETEEGFDATRWLDRTLI RLCSKFGEYRKDDPTSFTLKPYLTLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENISNA IVMIQPSLTSYSFNSGPQAALLDVASIAADKILLLDAYFSVVVFHGMTISQWRNMGYHHQPEHE LLDELQSDQWPVQPGHRPQRCTGVALSVAAGLLGACLPGTGARIVALVGGPCTEGPGTIISKDL SDPVRSHKDLDKDAAPYYKKAVKFYDSIAKQLVAQGHVLDLFASALDQVGVAEMKVAVESTGGL VVLSESFGHSVFKDSFKRMFEDGEHSLGLCFNGTLEINCSKDIKIQGVIGPCSSLEKKGPNVAD TVIGEGNTSAWKLCGLDKSTCLTVFFDLSSTGSTAPGALNQQLYLQFITRYQNSEGKSLARVTT LTRQWVDTAVSTENLVQGFDQETAAVVMARLTSLKMETEEGFDATRWLDRTLIRLCSKFGEYRK DDPTSFTLKPYLTLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENISNAIVMIQPSLTSY SFNSGPQAALLDVASIAADKILLLDAYFSVVVFHGMTISQWRNMGYHHQPEHELLDELQSDQWP VQPGHRPQRCTGVALSVAAGLLGACLPGTGARIVALVGGPCTEGPGTIISKDLSDPVRSHKDLD KDAAPYYKKAVKFYDSIAKQLVAQGHVLDLFASALDQVGVAEMKVAVESTGGLVVLSESFGHSV FKDSFKRMFEDGEHSLGLCFNGTLEINCSKDIKIQGVIGPCSSLEKKGPNVADTVIGEGNTSAW KLCGLDKSTCLTVFFDLSSTGSTAPGALNQQLYLQFITRYQNSEGKSLARVTTLTRQWVDTAVS TENLVQGFDQETAAVVMARLTSLKMETEEGFDATRWLDRTLIRLCSKFGEYRKDDPTSFTLKPY LTLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENISNAIVMIQPSLTSYSFNSGPQAALL DVASIAADKILLLDAYFSVVVFHGMTISQWRNMGYHHQPEHELLDELQSDQWPVQPGHRPQRCT GVALSVAAGLLGACLPGTGARIVALVGGPCTEGPGTIISKDLSDPVRSHKDLDKDAAPYYKKAV KFYDSIAKQLVAQGHVLDLFASALDQVGVAEMKVAVESTGGLVVLSESFGHSVFKDSFKRMFED GEHSLGLCFNGTLEINCSKDIKIQGVIGPCSSLEKKGPNVADTVIGEGNTSAWKLCGLDKSTCL TVFFDLSSTGSTAPGALNQQLYLQFITRYQNSEGKSLARVTTLTRQWVDTAVSTENLVQGFDQE TAAVVMARLTSLKMETEEGFDATRWLDRTLIRLCSKFGEYRKDDPTSFTLKPYLTLFPQFMFNL RRSQFVQVFNNSPDETAYFRMLLNRENISNAIVMIQPSLTSYSFNSGPQAALLDVASIAADKIL LLDAYFSVVVFHGMTISQWRNMGYHHQPEHE(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017;Chen et al., 2017a

circRNA

Detail information of AT4G14160_circ_g.3

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