Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT4G14160_circ_g.16 |
ID in PlantcircBase | ath_circ_030856 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr4: 8171915-8172176 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | circRNA_finder, find_circ |
Parent gene | AT4G14160 |
Parent gene annotation |
Sec23/Sec24 protein transport family protein |
Parent gene strand | + |
Alternative splicing | AT4G14160_circ_g.2 AT4G14160_circ_g.3 AT4G14160_circ_g.4 AT4G14160_circ_g.5 AT4G14160_circ_g.6 AT4G14160_circ_g.7 AT4G14160_circ_g.8 AT4G14160_circ_g.9 AT4G14160_circ_g.10 AT4G14160_circ_g.11 AT4G14160_circ_g.12 AT4G14160_circ_g.13 AT4G14160_circ_g.14 AT4G14160_circ_g.15 |
Support reads | 4 |
Tissues | leaf, inflorescences |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | AT4G14160.2:2 AT4G14160.3:1 AT4G14160.1:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.194749235 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |