Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os04g0405600_circ_g.1 |
ID in PlantcircBase | osa_circ_023742 |
Alias | Os04circ04792 |
Organism | Oryza sativa |
Position | chr4: 20124717-20129220 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ue-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Os04g0405600 |
Parent gene annotation |
Protein of unknown function DUF1350 family protein. (Os04t040560 0-01);Protein of unknown function DUF1350 family protein. (Os04t 0405600-02) |
Parent gene strand | - |
Alternative splicing | Os04g0405600_circ_g.2 Os04g0405600_circ_g.3 |
Support reads | 2 |
Tissues | panicle |
Exon boundary | No-Yes |
Splicing signals | CT-AC |
Number of exons covered | Os04t0405600-02:5 Os04t0405600-01:5 |
Conservation Information | |
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Conserved circRNAs | osi_circ_005443* osi_circ_014326 |
PMCS | 0.203430231 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |