Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os11g0202300_circ_ag.1 |
ID in PlantcircBase | osa_circ_008778 |
Alias | NA |
Organism | Oryza sativa |
Position | chr11: 5170319-5343125 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ag-circRNA |
Identification method | CIRI |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | Os11g0202300_circ_ag.2 Os11g0202300_circ_ag.3 Os11g0202450_circ_ag.1 Os11g0202600_circ_g.1 Os11g0202600_circ_g.2 Os11g0202600_circ_g.3 Os11g0202600_circ_g.4 Os11g0205500_circ_igg.1 Os11g0204600_circ_g.1 Os11g0204600_circ_g.2 Os11g0204600_circ_g.3 Os11g0204600_circ_g.4 Os11g0205500_circ_g.1 |
Support reads | 4 |
Tissues | seed, pistil |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | osi_circ_009012 |
PMCS | 0.539961973 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | osa-miR2919 osa-miR5809 osa-miR160d-3p osa-miR816 osa-miR821c osa-miR528-3p |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |