Splice junction sequence |
TTTTGCATTTGATTTCAACTATCTCAAGGTGTGCTGATATTACAAGTGATCTATCCATTGAATG GCAGTTTCCTTTGATTTTCATTCTATGTTTAGGTCCcttggaacagatctgaagaatgagattc tctagaaccggtgcatgttgaagaatgcaagttagtgcactaaaatcatcgggcacacaccagt attcattg
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 376 Transcript exons: 5170560-5170722,5170839-5171051 CTTGGAACAGATCTGAAGAATGAGATTCTCTAGAACCGGTGCATGTTGAAGAATGCAAGTTAGT GCACTAAAATCATCGGGCACACACCAGTATTCATTGAGTAACAAAGTCTTTAGCTTGGTAAATG TTGGGCGCCATTTCAAATCCCTTTTCAAAATAAACCGATCCACGTTCACTTATCAGCCCCAACG TCTTAGCTTCCGATAAACCTTCCAAAAGCACACAATTGTTGTCCTTGATACCGTAACAAGATTC GCAGTTCTCATGACCACAATCCCCAGAGTCAGACCAAATGCAATAGTCTTTAGTCCAGTTGAGG ACTCCAACAAATGCATCAACTAATGATGGCATCCTCTCAAGCACTGGAGCCCTGTC
Transcript length: 383 Transcript exons: 5170560-5170722,5170839-5171058 CTTGGAACAGATCTGAAGAATGAGATTCTCTAGAACCGGTGCATGTTGAAGAATGCAAGTTAGT GCACTAAAATCATCGGGCACACACCAGTATTCATTGAGTAACAAAGTCTTTAGCTTGGTAAATG TTGGGCGCCATTTCAAATCCCTTTTCAAAATAAACCGATCCACGTTCACTTATCAGCCCCAACG TCTTAGCTTCCGATAAACCTTCCAAAAGCACACAATTGTTGTCCTTGATACCGTAACAAGATTC GCAGTTCTCATGACCACAATCCCCAGAGTCAGACCAAATGCAATAGTCTTTAGTCCAGTTGAGG ACTCCAACAAATGCATCAACTAATGATGGCATCCTCTCAAGCACTGGAGCCCTGTCATGGAAG
|
Genomic sequence |
CTTGGAACAGATCTGAAGAATGAGATTCTCTAGAACCGGTGCATGTTGAAGAATGCAAGTTAGT GCACTAAAATCATCGGGCACACACCAGTATTCATTGAGTAACAAAGTCTTTAGCTTGGTAAATG TTGGGCGCCATTTCAAATCCCTTTTCAAAATAAACTGCGCGGAGTGCAAAAAAGAAGATAAACA AAAACCACAGAGTTCAAGTGGATATAAGCACATTAATATAAATAATGAGATAATACAAACAACT TAAAGATGGAAGTGCAAGCATACCGATCCACGTTCACTTATCAGCCCCAACGTCTTAGCTTCCG ATAAACCTTCCAAAAGCACACAATTGTTGTCCTTGATACCGTAACAAGATTCGCAGTTCTCATG ACCACAATCCCCAGAGTCAGACCAAATGCAATAGTCTTTAGTCCAGTTGAGGACTCCAACAAAT GCATCAACTAATGATGGCATCCTCTCAAGCACTGGAGCCCTGTCATGGAAGCCATCCAGCTGCA GAGAAACAAGACTCGGGATAGCGATACGTACCCGAGATATCTCACTGAAATAGGAATTGGTTAT GCTCAAACGTTTTGCAGAGCTAGATGAGATCTTGGCACAGCCAAATTTACATGACTGAAACACT AGATGTTCCAATGCTGGACAGCTCGAGAAGTTAAGGAAGCTGTCGTTTACCCTTATATTTCGAA GCTGTAGCCTCGTCAAGTGCTGGGAGACAAGTGGCATCTCATCTATCACAAATGAGTGGTAGTA TCCGACGTCGAGCCAGAGGAACCGAGCCTTGTGGATAAGAGCATGCCTGAACCATAGGTTCACC CGAGCTGTGTCCTCGATGTCCATGTCGCCGTAATAATCGAACATTAGCACGCACGTGTCGAGAG GGGCTCCATCACGGAGTAGCAGCAGACGGTCGAGAAACTCCTTCTGTTTCTTCACGCTTCCCAG ATAGTCGCAGTCCTCGCCAATGCGCAGCCCCGTGGCGGACTTCCAGAGGTGGAGCCATCGCCGA GCCAGCAGGCACGTCCGGACAGCCTCCTGCGCCGGTAGGAAGGAGAGCACGTGGTGGAGCACCT CATCCGGGAGGTCCCCTATGCGGTCTCCCCCGGTCGAGCCAGGCGATTCCTTGGGCATCTTCCG CGGAGACATTCCGTCGAACAGGTTGCGGGCGTCGCCGCGGCGCCACCCCTCCCCTCCCAGCGTA GCAAGAACAGCTCAGGTAACAGTAACACCAGGAGCGAGGGCTGTAAGGGTCAGGACCAAGCTGC CCACATCGCCACCGGCAGCCTCCCCCCGGCCACCGGACACCGACCAGAGAGTGGAACGCGCGGC GCCCGCGTTGCAAGGATACGGATACGCCAATGGCGCGGCGCGACGCTGGAGAGGAGAAGCGCGA CACGAGCGCGGGAAGCGGACGGAGAGCTCTGGATCGGAGGGGAGGAAAGGGTGGGATGCTGTGC TGGGTGGAGAAGACGGAGAGTTTGTAGTCAGTTTCTATCTCTACTGAGGTGAGTCATGACTGGG GAGAGCCTGGGAGTCAGTTTGCTGTGCATATAGTTTTATTTTATTTTTTTGTTACTAGCATGAA AATAAAGTTAGGACGCGGGAAAAAATATTACCGCATTATTAATTGAGTTTTCATTATTATAAAC TTACAAATAAATTTATCTAATATTTTTAAGCAACTTATATAAAATAATTATTTCATATCAAGCT TATAGCCTTAGGTTGCGTTCGGTAGTCCAATGCTGCCCTCCAGCACAGAAAACGGAGTGGTCCA TTAGCGCGTGATTAATTAAGTATTAGCTAATTTTTTTCAAAAAGAATCAATATGATTTTTTAAA CAACTTTCGTACAGAAACTTTTTTTAAAAAAAGCGCACCGTTTAACAGTTTCAAAAGCGTACGC ACGGAAATTGAGACAGGAGAGTTCCGAACCTGGACTAACGAACGCAGCTTAATAAGCCAAAATA AGTTATTGGGAAATAAAAATTAGTTTCTAGATAAAACTTTTATATATTGGTTCATAGCGATTTA AAGGGCAATGCTAAAAAGAAATTACGTTGAAATATCTTAAAATCAAGTTAAAAATTTAAATTTT GGCTTTTGCTTTTACTTATTAGGCTAATTGATGGGGCTCTCAGTTTAGAGCTCATTTAAAATAT ATTTCCTCTGTCCCTATATAAATGCACTCTAATACAGGATGTGACATATCATACTACTACGAAT CTGAATATAACAGATAAAAATAAATTACAAGACAGATGATTACAAAATAAAAAAATATAAGAAT AATCGTTTAGCAGGATAAGATACAAGATGGATGAGAGATAGACTTAAACTAAAATTCCAAAAAC GTTAGAGCTCTTGGTAACTTTCCTCCAAAGTCTTTATATGATTGTACATTTCATAGAATTTCAA AGTCTTCATAAATAAAACAAATTGATTTAACCATTTGTTTTAAAGGTCATTTCAGAATTTTTTC TACAGAATTAAAATCCTTAAACTTTTTATGTTTTTCCTATGAATTAAAAAACCCTCGGAAGCAG GGGCGGATCTACCCATTAAGCAGGGTAGGTCGACTGTCCCAGCTACGACTCGTGTTGCCCCACA CCCTCAAACCCCCCCTAACCCCTTATAATAGTTGTGGACCATCAAAATTAGGTATAAGAAGGTG TAAGCACTCAATAGATGTTCGTTTCTTCACAACATACGCACGCCGCAAACAATGATTGAGACAG TTATATGCGATTGAACTATAAATACGATATGTGTTGTGTTTAATTGCTCTTATCGAGTGAACAT CTCTTTTCTCCGCCCCATCTATATTTTGAAGTTGCGTCCACCACTGCTCGGAAGCCCAGGTAGT GAGCACATGGAAGCTTAACCTTCTTAATAAATCAAAACAGTGGTGCATCAACCATTTTTCTCTT CCTCTTCCTCTTACTCTTCATCTTCATCTTCATCTTCGTCTTCGTCTTCATCGTCATCGTCTTC GTCTTCGTCTTCATTGTCTTCGTCTTCATGTTCGCCTTTGTAAGAGTCTTCATTTTCGTCTTCA AAAGGGTTTTCATAAGAGTCCTCGTCTTCATCCTCATCTTCCTCCTCTTCATCCTGGTCATTTT CATCTTCTTCCAAAATCTCGATTTCCTCAAAACTAAAAACTGCACAAAAACAAATAAGAAGAGC ACAGTAAGTTTCAAGAGGTCTCACCTGAAACTTCACTTCAAAACAAAAACTTCAAATCCATTGA CAAACTTAGTCCATTGGACCAATCCTTCAAAATCCAAATGGACATAAAGACTTCATTACTTCTT CATGACTAAAATCTGATTGTATCCACTACATTTAAAGAAAAGAAACAAAATAAAATGCCCTCAC TTGAACAAGCATTGGTCCTTTACAACATGGTTGCATCCTATAATGCATAGTAGTTGGATTCTCT ACAACCTAGCACACGGCAAGAGAGAAAATTGCATGGTCTAGGGACTATGTGAGTACCCATGGCA ATTTGTAAACAAGATTTTTGGACACCAGGCTATAATCACCAGGCGTTGTGAGCTCAACATAACA AATATAATCTAGTGTGACAAAAAAAAATTACCTTAGCCAAACAACACAACTAAGCAATCTTGCC CAATTATTAATTACTAGCTGCTATGATACAACCTGGATGACTAGTGCAGCAAACTTGCATACAG CACCTCTGGTAATGGTAAACTGATTATCATAGCAGAACAAAGTCTGTGAGGTACTTGCATACAT GGCAAATGGCATGCGAGCTATAAGAGCAACTAATAAACTGGAATTCAAGATGGCAACTGATGGG AAAGAAAATCAAATAAAATTATTGAAAGATATAATTACACACATACTGGCATACATGTTATCAT ACCGGTTACGCGATGCAAGAAAATTTTAGAAATCAGAATGGTTTTTTCGAATACTACTAGCCAA AAGAGTAGAATAGATAACGTCTTCCCAATTGTACCAAATGGAGTGCATGCTTTCATTTCTCAAT TAATCCATGTTCCTAGCATCAATTTCCAAAGAACTTCAATACAGCTTGCTATATTTCATGCATA TGAAGGTAAAGGAAAATTTTAGAAATATACAAAGAATGAAGAATGTTTACGTATGTTAAAAGTA GACAGAAACTTCAAAACTTTGAGTACTCTCTTATCAACCGTTTTGCATTTGATTTCAACTATCT CAAGGTGTGCTGATATTACAAGTGATCTATCCATTGAATGGCAGTTTCCTTTGATTTTCATTCT ATGTTTAGGTCC |