Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA006435_circ_g.21 |
ID in PlantcircBase | osi_circ_011757 |
Alias | Chr03:11324702_11326887(MH63RS2), Chr03:11356426_11358611(ZS97RS2), Chr03:11324702_11326887(MH63RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr2: 18746037-18748222 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ei-circRNA |
Identification method | CIRI2, CIRCexplorer2, CIRCexplorer2, CIRI2, CIRCexplorer2 |
Parent gene | BGIOSGA006435 |
Parent gene annotation | NA |
Parent gene strand | - |
Alternative splicing | BGIOSGA006435_circ_g.1 BGIOSGA006435_circ_g.2 BGIOSGA006435_circ_g.3 BGIOSGA006435_circ_g.4 BGIOSGA006435_circ_g.5 BGIOSGA006435_circ_g.6 BGIOSGA006435_circ_g.7 BGIOSGA006435_circ_g.8 BGIOSGA006435_circ_g.9 BGIOSGA006435_circ_g.10 BGIOSGA006435_circ_g.11 BGIOSGA006435_circ_g.12 BGIOSGA006435_circ_g.13 BGIOSGA006435_circ_g.14 BGIOSGA006435_circ_g.15 BGIOSGA006435_circ_g.16 BGIOSGA006435_circ_g.17 BGIOSGA006435_circ_g.18 BGIOSGA006435_circ_g.19 BGIOSGA006435_circ_g.20 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | Yes-No |
Splicing signals | TG-AC |
Number of exons covered | BGIOSGA006435-TA:6 |
Conservation Information | |
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Conserved circRNAs | osa_circ_019495 |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |