CircRNA Name |
Os02g0220500_circ_ag.4 |
ID in PlantcircBase |
osa_circ_013896 |
Alias |
Os02circ08547/Os_ciR39 |
Organism |
Oryza sativa |
Position |
chr2: 6718702-6723684 JBrowse» |
Reference genome |
IRGSP-1.0.38 |
Type |
ag-circRNA
|
Identification method |
CIRI, SMALT, Segemehl, find_circ |
Parent gene |
NA |
Parent gene annotation |
NA |
Parent gene strand |
NA |
Alternative splicing |
Os02g0220500_circ_ag.1 Os02g0220500_circ_ag.2 Os02g0220500_circ_ag.3 Os02g0220500_circ_ag.5 Os02g0220500_circ_ag.6 Os02g0220500_circ_ag.7 |
Support reads |
2/2013/246 |
Tissues |
panicle/root/shoot, anther, seed, pistil |
Exon boundary |
Yes-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
GT-AG
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
NA
|