Detail information of Os02g0220500_circ_ag.7


General Information
CircRNA Name Os02g0220500_circ_ag.7
ID in PlantcircBase osa_circ_013899
Alias Os_ciR22
Organism Oryza sativa
Position chr2: 6719696-6724512  JBrowse»
Reference genome IRGSP-1.0.38
Type   ag-circRNA
Identification method CIRI, find_circ
Parent gene NA
Parent gene annotation NA
Parent gene strand NA
Alternative splicing Os02g0220500_circ_ag.1 Os02g0220500_circ_ag.2 Os02g0220500_circ_ag.3 Os02g0220500_circ_ag.4 Os02g0220500_circ_ag.5 Os02g0220500_circ_ag.6
Support reads 4463/154
Tissues root/seed, pistil
Exon boundary   Yes-Yes
Splicing signals   GT-AG
Number of exons covered NA
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   AATCCTCTTGATTTGCTCCCTCCAAGCAAAATGATCCTTGATGAGTGGAAGAGGTTATACTCAA
ACACAAAAACAAACTTCCGTGAGGTTGCTATCAAGGgtttctgggatatgtatgacccagaagg
ttactccctgtggttttgtgactacaaatacaatgacgagaacactgtgtccttcgtgaccatg
aacaaggt
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GTTTCTGGGATATGTATGACCCAGAAGGTTACTCCCTGTGGTTTTGTGACTACAAATACAATGA
CGAGAACACTGTGTCCTTCGTGACCATGAACAAGGTTGGTGGGTTCCTGCAGCGAATGGACCTG
TGCCGCAAATATGCTTTCGGGAAGATGCTTGTGATCGGCTCTGAGCCGCCATTCAAGGTGAAGG
GTCTTTGGCTCTTCCGTGGCCCCGAGATCCCCAAGTTCGTCATGGATGAAGTCTATGACATGGA
GCTCTATGAGTGGACCAAGGTTGACATCTCAGATGAGGCCCAGAAGGAGCGCGTCAGCGCCATG
ATTGAGGACCTGGAGCCATTTGAGGGCGAGTCGTTGCTGGATGCGAAATGCTTCAAGTGAGGCG
TCGTTGGAGCAAGGATACCGTGGAAAATGAGCTATTTAGGTTTTGGATTTACCCTTCTACAATA
GTTCATGATTATGAAAAAAAAAATACTATCACCATGTGGCTATATTAGTCAATATTGAGTGTGC
TGGTCTTTTCTTTTTGTACTGTTTGCTAGAGTTTTGGCCCTTTTTAACCTTGTAGTTAAGTTGT
TAAGACACTTATCCATCGAATCATCGTCAGAAACACACCATTCGAATCTGCTGTTGCTCATGTG
TTAAACTTGCCATTCTGATAATGTTTTGGAAATAGGCAACAAAACGAGTTATGGTGCTGGGTTA
TTTTATGTATTTTATTCTGTTGTTCATGTTTGTTGTGTTTCTTTTTTTTTTCTTTTGCTTTCAG
CGCTGGGCACGCAGACGAAGGCCATGTTCGTTTCTATTGAGATTTTCTTGATTATCTGGTTTGG
TGATGGCTATTTGAGGGTATATAAATGAATGAATGAACGAATTACTATTAATTTAAAATTTTGC
TTTAGAAAAATATTTCCAAGAAACTTCTATTATATAGAAATTTTTTACATGAAAAGCATAGCTT
GGTAAGCCGGATAATAATCTCCTGAATCAAAAATGGGATCTACAACGCATGGATCAGAGATTTG
CGTTTTGTCAATGTGTCAACTTGCCTAAGCATTTGCGGAGTAAATTTAGTGACGTTAAAGAAAG
AAAGGGAAGGAAGGAGAAACAACTACGGATGACAACGGTTTAGGGTTTAGAGTTAATGTGGAAG
AAATAGAGGGAATGAAGGAGAAATATCGTTGCTATGCATGACAACGGCTCCTCAGAGTCAAGTG
AAAGAAAGAGAGGGACGCATGACATGACAACGGCTCCTCAGAGTCACGTGAAAGAAAGAGATGG
AAGGAAGGAAAAACATCGTTGATACGCATGACAACGGCTCAGAGTCGACTCTTAGCATTCATTA
ACGAAAAGTTTGTTGCATGAGAGTGGAGAAAAATGAAAGAAGTATAATAAAAATTTATTTATAC
ATTAATGGTTTAGAAAACTTATTGTCTTTATTACTTTAGTACTTCCTCCGTTTACTTTCTAACA
TTGCTAATATTCATATATATGTTAATGAATCTAAACATATATGTGTGCCTAGATTCACTAACAT
CTATATGAATGTGAAGAATGCTAGAAAGTCTTATAACCTGAAACGGAGGTAGTAGGATATAGTC
TCTAGTAATATTAATTAATATAAAGAGCTCATATTAGACTCTACCTTTATACATGCCTTGAAAT
TAACTCACAGCATCACCACCATGCGAACATTAAATCCTCCTTACTCCATTTCGTATTCTATAAT
ACTATCTCCTTCCCCTTAATAACGTTGGTCCTTACTCCACTCAGTATTCTGTAATACTAATCTC
CTTCCCCTTAATAACTTTGGTTAGTTTAATTTTGAGTAAATTTTAGGGTGTTTGGTTGTAGTCA
CAGTTGTGGCAAGATTCTCTTCCAATAAACGAGTCATATACGTTATTGACTCAAAAATGTGTTG
CAAGATTTTCTTAGGCTTGCTAAAGTGTGACCAAGAATTTGATCGCCTCACTTAGACAAGTGTG
GCAATACTTTTGTATGTAGTTTTATGATAAATTAACCTATATATATATAATTTTCTAAAATTTA
TTTAATTTTTTTATGGGAAAGAAATGGATTTAATTTTTTTTAGAAAAAATGCCCAAGGCCCGTT
TCGATCCAACGGGCTCGACTGGAAGGGGCCAGAGTGCCAGACGAATGCCCGCCTACGGAGTGGT
TGGATCTGCTCTGCGCCGTCCGATCTGTCGCAAGGCTTACTCATCGGACGGCCGAGATCACCCG
CGCGCAACCCTAGGCGAGATCGTAAGTAGAATCGGCTGCGTCGAATCCCTCCACTGTTTTTGCT
GCCGCTGCTACTTCTTCCACTAGGGTTCGTCTTGCTGCTCCCTCCACTGCTCGCCTCGCCTCCG
CCACCGTAAGATCTCCCCGATTCGCTACAACTAACTAGTGTGCTTGCGCCATTGTTGCGTACTG
TTGATTTTGCGGATTTTTTTTTAAATTTTTTTGGATTTTTGTTTCCTCATGATGTGCAGATCTG
AAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCGTAAGTGATTCTTGA
TCTAACCTCGTTTGCTCGTGTTCTTTAGTTGATTTAGTGGAGAAGCTTGGCATGATGCGGTGGG
GTGTAGTTTTTTTTTTTTCATTTTCAAATTGTAGCATCTGTGGATTGCTGTATGAGTCTTCTGT
AAAGCATATCGTTTTTTTCTGCACGATCAGGGTTGATTTGGTGCGCATTTCTACCCAGCATTTA
GGGAGGGTTTTGGTAGGGTGGTGACAGTTTAGGTGTCACGGATTTTATTTAGATCGGTGGACAA
TGTTCGGTCTATGTCTAGCATCTCTTATTTACTTAATGTTGTCTTGCAAGCTCGTTGAAATGCA
GATTTCTGGTTTTTTTTTTTACTTTGTTACTTTCTGGTTCAAATGCTGGCGGATCAAGTGAATA
TTAAATAATTTGTGCAGTGAGGAAGCAAGGACCTGCCTTCGAAATTTTTCTAGTCTATATTTCT
GATTATTTGATCCCAAGTGTTAAAGATTGTTGCCAAGGTTTTCCAATAGTTAGCCTTTCTTATA
TACATTTGATGATGTAAGACCAAATTCAAATGCATACAAATGAAAGCCTGATCACATGACAGTT
TGTTGACAATATATACATTATCCTGTAGAGATTCGCACAGGGCTCTGCTTTCCTAGAATGCTTA
CAGCTTCCTGTTTGATGCAAATGGGATTATTTGGAGTTTCGGAAATGAAGTCTTATTCGCTTTC
TGAATAGCCGATGAGCATGTAGACATGTCTCATGCAGACATTATAGCTCAGCACTTGTGCACAT
AATTATATAATATGTATGTATTGACCATCACTCTGTAGAACATTGAATGGCTAAAGTCACTGTG
TAATATGTGCTGCTTGATCTATGAATTTGTCCCGTTGTTTGTATATTTTTTGTTTATCATGTTT
GTGTATCCATCCTTATGGACATGCTAGTCAAACTGTCCTTGTAGTGTTGTCATGTCATGCACTT
CCCTAACCTATTTTCACGCTCAACTTTGTAACTTGCATTGGTGTAGGTATTGCATACTTTCGAT
GGAAACAAGAATGCATTCAAGGCACTCATTGCTGCCGAGTACTCTGGTGTCAAGGTTGAGTTGG
CAAAGAACTTTCAGATGGGTGTCTCCAACAAGACTCCTGAGTATCTCAAGATGAATCCTATTGG
GAAGGTTTGAGCAAAACCACCTCTGAATTTTGGTACATTTGCACAGAATCTGATTTGGACACGT
TTCCTTTCAGGTCCCTATTCTAGAGACTCCTGATGGTCCTGTTTTTGAAAGCAATGCGATTGCA
CGATATGGTAAGTGATACATAGCAAGGATTCCGTTCTTTTAATCCTTTTCTCTCTATTGCTTGA
TTTAGTTCTAAGTTCCTCTCATTTTCCTGAAGTTACTCGCTCGAAGTCTGACAACCCACTCTAT
GGGTCTTCACTGATTGAATATGTGAGTGATCTTTCATAAATATTTAGGATCATTCTTGATTATT
TTCCAGCTCCTAGAATTTTGTGTTTCTTTCAGGTTGATCTTTCATAGACATTTAGGATCATTCT
TGATTATTTTACCAGCTCCTTGAATTTCTTGTTTCTTTCAGGCCCACATTGAGCAGTGGATTGA
CTTTTCAGCCACAGAGGTTGATGCTAATACTGGAAAATGGCTCTTCCCACGTCTTGGATTTGCT
CCTTATGTTGCTGTCGTAAGTATGGTCAAGTGGGTATCGTTGTGTTCTCCTTGTTAGCAATTTG
TGATCTAATCTTGTTTCTGCCTAACAGAGTGAGGAAGCAGCTATTGCTGCTTTGAAGAGATCAT
TGGGTGCCCTCAACACACACCTTGCATCAAACACATACCTTGTTGGCCATTCAGTGACTCTTGC
TGATATTGTGATGACATGCAACCTCTACATGGGCTTTGCTCGGATCATGACCAAGAATTTTACT
TCTGAGTTCCCTCATGTTGAGAGGTACTTCTGGACCATGGTTAACCAGCCAAACTTTAAGAAAG
TCATGGGTGATGTGAAGCAGGCAGATTCTGTCCCACAAGTTCAAAAGAAGGCTGCAGCACCAAA
GGAGCAGAAGCCAAAGGAAGCCAAGAAAGAGGCCCCAAAAGAAGCTCCAAAGCCTAAGGCAGCT
GAGAAACCAGAGGAGGAAGAGGAAGCACCAAAGCCAAAGCCAAAGAATCCTCTTGATTTGCTCC
CTCCAAGCAAAATGATCCTTGATGAGTGGAAGAGGTTATACTCAAACACAAAAACAAACTTCCG
TGAGGTTGCTATCAAGG
Conservation Information
Conserved circRNAs osi_circ_012725
PMCS 0.88854707
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Ye et al., 2015;Chu et al., 2017