Plant Circular RNA Database

Detail information of Os10g0181333_circ_g.10

			
						 General Information
					
						CircRNA Name
						Os10g0181333_circ_g.10
					
						ID in PlantcircBase
						osa_circ_006331
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr10: 5581998-5584768  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ui-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os10g0181333						
					
						Parent gene annotation
						
							Hypothetical protein. (Os10t0181333-00)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os10g0181333_circ_g.3 Os10g0181333_circ_g.4 Os10g0181333_circ_g.5 Os10g0181333_circ_g.6 Os10g0181333_circ_g.7 Os10g0181333_circ_g.8 Os10g0181333_circ_g.9 Os10g0181333_circ_g.11 Os10g0181333_circ_g.12 Os10g0181333_circ_g.13 Os10g0181333_circ_g.14 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os10t0181200-01:11
Os10t0181200-02:2
Os10t0181333-00:11
Os10t0181200-01:11
Os10t0181200-02:2

General Information
CircRNA Name	Os10g0181333_circ_g.10
ID in PlantcircBase	osa_circ_006331
Alias	NA
Organism	Oryza sativa
Position	chr10: 5581998-5584768 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ui-circRNA
Identification method	CIRCexplorer
Parent gene	Os10g0181333
Parent gene annotation	Hypothetical protein. (Os10t0181333-00)
Parent gene strand	+
Alternative splicing	Os10g0181333_circ_g.3 Os10g0181333_circ_g.4 Os10g0181333_circ_g.5 Os10g0181333_circ_g.6 Os10g0181333_circ_g.7 Os10g0181333_circ_g.8 Os10g0181333_circ_g.9 Os10g0181333_circ_g.11 Os10g0181333_circ_g.12 Os10g0181333_circ_g.13 Os10g0181333_circ_g.14
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os10t0181200-01:11 Os10t0181200-02:2 Os10t0181333-00:11 Os10t0181200-01:11 Os10t0181200-02:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATACTCCAGCCAATTAACTTTGCATCATCATGGTCATTCATTGCTTTCTTTTGTTTACTCACAG
GACCATCCCTTAAGCATGCAACTGGAACCAATCGCCcagtaagacaaccaacgattgtgggatt
gaggtcaatactgtctatttttaattgttcaaatagatccaaacccagttgtgcttcagcattc
ctgtgggg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1476
Transcript exons: 5581998-5582089,5582167-5582275,5582636-5582735,5582919-
5583059,5583151-5583315,5583393-5583584,5583714-5583842,
5583924-5584039,5584126-5584270,5584344-5584407,5584546-
5584768
CAGTAAGACAACCAACGATTGTGGGATTGAGGTCAATACTGTCTATTTTTAATTGTTCAAATAG
ATCCAAACCCAGTTGTGCTTCAGCATTCCTTTCACAAGCCACAAATAACACCGAATAGGTTATC
ATATTTGGACAGACTCCTAATCTCTTCATCTCACTAAGGACCTCAAAAGACTTCAAAACTTGAT
CACCATCACACAATGCGGTGATCAGAGCATTCATCATTGAAACGGTTGGCATTAATTTGATTGA
CTTGATCTCCTCAAATAGCTGCAATGCCTTTTTCCAGTCCTTGGCATTGCAGCAAGCACCCATT
AATGAACTGTATGCAATGGTTCCAACTTGATATCCCTTTGCTCTTGCATCTTTCATTATCTCAA
AGGCAGCATCAGCCCTCCTAGCATGGCCAGCAACATCAACTAGAGCACTCAGAAACATCTCATC
AGGTTGTACTCCAATCTTGTTCATATCTTCATAGATCTTCAGAGCAAATCCTAAATCACCAGTC
AAGCTACAGCTTCTCAATGCTATTGTGTAAACTTCTGGAGTACCCTTTATATTGTACTCCTGAA
GCATTTTGTATACCTCACGAGCTCGATCAGCCTGGCCAGCCTGAATACATGTCTTCATCAGAGC
TCCAACTGTGACATGATCAGGAAGAATCGGTTTGGATCCTTTAGATTCAGAGGCTTCTGCTGTC
ATTTCTGATAGAACATCAAAAGCTCGAGCAACCGCTCCAGATTCACCGCATGCACTGATCAAAG
CATTAAAGACAACTCGATCTGGCTTCACCTTCTTTGAACTCATGATACCATAAGCACCAAATGC
TTTTGCTACTTGACCAGCTTTTGCACAGCCATCAATCAGTGCACTATATGTGTTAACATTTGGC
TCTATTCCAGCACTGACCATCTCATGGAAGACCTCAAACATAGCATCAACTTTTCCACACTTGG
CACAAGTCGATATAAGTGTTGTGTAAAGTTTACAATCAGGTTTTAGCCCAGCTTCCTTTAGGAG
CACCATAACTTGGAGAGCCCCATCAAAATCTTGCGAATTAGCGCACACAGATAAAAGCATATTG
AAGGTACTCATTTTTGGGTTATTGATCAACTTGCAAAAACGAACAGCTTCCGGAACAGCCCTTT
GCTTCTTACAGGCATTCAGAAAGCTAGCATGGTGGATCTTATTCATATCAAGCAATCCCTTTTG
CTCCATGCTTTCCAATAGATCCACAGAGTCTTTCAATCTTCCATCAATTAACAAACTATTGTAT
CTCCTCAAGTAATCTGGCACGTCCTTTGTTCCCCTCAATCCAGCTCTATTTGCTGAAGTAGAGT
TTTCTGGATTCTCCTTGCTCAGTAAATTAGAAATACTCCAGCCAATTAACTTTGCATCATCATG
GTCATTCATTGCTTTCTTTTGTTTACTCACAGGACCATCCCTTAAGCATGCAACTGGAACCAAT
CGCC
						
					

						Genomic sequence
						
							CAGTAAGACAACCAACGATTGTGGGATTGAGGTCAATACTGTCTATTTTTAATTGTTCAAATAG
ATCCAAACCCAGTTGTGCTTCAGCATTCCTGTGGGGAAACTATTAGTACCTGAAGAGTGCGATA
AGATTAGTTTGAAGAGTGCAGTTCCAGCTCAGAGTTGTTACCTTTCACAAGCCACAAATAACAC
CGAATAGGTTATCATATTTGGACAGACTCCTAATCTCTTCATCTCACTAAGGACCTCAAAAGAC
TTCAAAACTTGATCACCATCACCTGCATCATCGAGAAACTGTCATTATTTCCATGTCCAAAGAA
GCAAGAGTTTTTAAAGAAAATGATAGGGAACAGCTATGAACATATATATAGAAAATGAAAGTTG
CACCAAGGTTCCTATATTTGACTATAATAGCACTGAGGCTTTTAAAAGTAATTTGGCAGGTCTC
AGAAACACATAATGGACTTCTACTTGGATCCTTCAATTTAGAAAGTTAAGTTATTGTGTCTTTT
TCACTGGCTGAAACTGTGATGTAAGCCACACATCTTTATTAATTGGCAAAACGTTAGTATTAGC
TCACTGAAATGACAAAAAAAACATTTTATTATTGCTACAAGTATTCAGATGTTTGGACATACAC
AATGCGGTGATCAGAGCATTCATCATTGAAACGGTTGGCATTAATTTGATTGACTTGATCTCCT
CAAATAGCTGCAATGCCTTTTTCCAGTCCTTGGCCTGAAACAAGAATTTAAATGTCGTGATAAT
AACACCGAACTCAAATCAAAAGTACATGGAATACAAGTAAAATTGCAAAAGAAAGAATAACTAA
GTGCATAAAAGACCTTGTGCTACTGTGGGGAGCAGAACTTAATAACTTGTTATATTGGTTTTCA
TCCAACAATTTATGTCAGAACTTACATTGCAGCAAGCACCCATTAATGAACTGTATGCAATGGT
TCCAACTTGATATCCCTTTGCTCTTGCATCTTTCATTATCTCAAAGGCAGCATCAGCCCTCCTA
GCATGGCCAGCAACATCAACTAGAGCACTCAGAAACATCTGTAGTGGATGGAATCAAACAAACA
TAACAGTTAAATAAGTCATGTGGGTTAAGCACATATCCCTTTAATGTTCTCTCTAGAAATAACA
CCTCATCAGGTTGTACTCCAATCTTGTTCATATCTTCATAGATCTTCAGAGCAAATCCTAAATC
ACCAGTCAAGCTACAGCTTCTCAATGCTATTGTGTAAACTTCTGGAGTACCCTTTATATTGTAC
TCCTGAAGCATTTTGTATACCTCACGAGCTCGATCAGCCTACACAAACAAATGTTTTTTTGAGT
TAGATACTATATAGCCTATTTCGCGTTTACAACAAAGGATCTGCAGAACACCTGGCCAGCCTGA
ATACATGTCTTCATCAGAGCTCCAACTGTGACATGATCAGGAAGAATCGGTTTGGATCCTTTAG
ATTCAGAGGCTTCTGCTGTCATTTCTGATAGAACATCAAAAGCTCGAGCAACCGCTCCAGATTC
ACCGCATGCACTGATCAAAGCATTAAAGACAACTCGATCTGGCTTCACCTTCTACTGCAAGTAT
GGCCCAGTAAGTTCAACAAACATGGAAAGCGCATAGAAGTGATTCACCAGTAGCATTTGCAGCA
CAGGTGAATGGAAGACATGTAATATAAAAAGAAAAAATATCTACCACTTCACCTTTGAACTCAT
GATACCATAAGCACCAAATGCTTTTGCTACTTGACCAGCTTTTGCACAGCCATCAATCAGTGCA
CTATATGTGTTAACATTTGGCTCTATTCCAGCACTGACCATCTCATGGAAGACCTTAAATATAA
GTACACAATAGATATAAAGCTATCATATTTTTAAGTCAAACATATATGTATGAATATGTCATTT
AGTTACCTCAAACATAGCATCAACTTTTCCACACTTGGCACAAGTCGATATAAGTGTTGTGTAA
AGTTTACAATCAGGTTTTAGCCCAGCTTCCTTTAGGAGCACCATAACTTGGAGAGCCCCTAAAA
GGTAAAAACAGTCATGTCTCATCAGATCTTAATCTAACAAATCACACAAGAAAGCTGCAGTTTT
AAGTTCAAGCAGCTACCATCAAAATCTTGCGAATTAGCGCACACAGATAAAAGCATATTGAAGG
TACTCATTTTTGGGTTATTGATCAACTTGCAAAAACGAACAGCTTCCGGAACAGCCCTTTGCTT
CTTACAGGCATTCAGAAAGCTAGCATGGTGGATCTGAAAGTAGATGGAAATCAGGAAAGAGAAG
AAGATATACACTAAAAAAAGGACTATTAGAACAGGTAACAACCTTATTCATATCAAGCAATCCC
TTTTGCTCCATGCTTTCCAATAGATCCACAGAGTCTTTCAATCTGACCATACCAAATTGAAGTA
TCAAGCAAAAAATATTTATAGCACAAAGAGTGCAGCATATTTAATATGAAAATTCCATGTATGT
AAGGGGTGTTCTGGGAACAGATTAATAGCAATTATTATGTCCAACATTATACCTTCCATCAATT
AACAAACTATTGTATCTCCTCAAGTAATCTGGCACGTCCTTTGTTCCCCTCAATCCAGCTCTAT
TTGCTGAAGTAGAGTTTTCTGGATTCTCCTTGCTCAGTAAATTAGAAATACTCCAGCCAATTAA
CTTTGCATCATCATGGTCATTCATTGCTTTCTTTTGTTTACTCACAGGACCATCCCTTAAGCAT
GCAACTGGAACCAATCGCC
						
					

			
		

Sequences
Splice junction sequence	ATACTCCAGCCAATTAACTTTGCATCATCATGGTCATTCATTGCTTTCTTTTGTTTACTCACAG GACCATCCCTTAAGCATGCAACTGGAACCAATCGCCcagtaagacaaccaacgattgtgggatt gaggtcaatactgtctatttttaattgttcaaatagatccaaacccagttgtgcttcagcattc ctgtgggg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1476 Transcript exons: 5581998-5582089,5582167-5582275,5582636-5582735,5582919- 5583059,5583151-5583315,5583393-5583584,5583714-5583842, 5583924-5584039,5584126-5584270,5584344-5584407,5584546- 5584768 CAGTAAGACAACCAACGATTGTGGGATTGAGGTCAATACTGTCTATTTTTAATTGTTCAAATAG ATCCAAACCCAGTTGTGCTTCAGCATTCCTTTCACAAGCCACAAATAACACCGAATAGGTTATC ATATTTGGACAGACTCCTAATCTCTTCATCTCACTAAGGACCTCAAAAGACTTCAAAACTTGAT CACCATCACACAATGCGGTGATCAGAGCATTCATCATTGAAACGGTTGGCATTAATTTGATTGA CTTGATCTCCTCAAATAGCTGCAATGCCTTTTTCCAGTCCTTGGCATTGCAGCAAGCACCCATT AATGAACTGTATGCAATGGTTCCAACTTGATATCCCTTTGCTCTTGCATCTTTCATTATCTCAA AGGCAGCATCAGCCCTCCTAGCATGGCCAGCAACATCAACTAGAGCACTCAGAAACATCTCATC AGGTTGTACTCCAATCTTGTTCATATCTTCATAGATCTTCAGAGCAAATCCTAAATCACCAGTC AAGCTACAGCTTCTCAATGCTATTGTGTAAACTTCTGGAGTACCCTTTATATTGTACTCCTGAA GCATTTTGTATACCTCACGAGCTCGATCAGCCTGGCCAGCCTGAATACATGTCTTCATCAGAGC TCCAACTGTGACATGATCAGGAAGAATCGGTTTGGATCCTTTAGATTCAGAGGCTTCTGCTGTC ATTTCTGATAGAACATCAAAAGCTCGAGCAACCGCTCCAGATTCACCGCATGCACTGATCAAAG CATTAAAGACAACTCGATCTGGCTTCACCTTCTTTGAACTCATGATACCATAAGCACCAAATGC TTTTGCTACTTGACCAGCTTTTGCACAGCCATCAATCAGTGCACTATATGTGTTAACATTTGGC TCTATTCCAGCACTGACCATCTCATGGAAGACCTCAAACATAGCATCAACTTTTCCACACTTGG CACAAGTCGATATAAGTGTTGTGTAAAGTTTACAATCAGGTTTTAGCCCAGCTTCCTTTAGGAG CACCATAACTTGGAGAGCCCCATCAAAATCTTGCGAATTAGCGCACACAGATAAAAGCATATTG AAGGTACTCATTTTTGGGTTATTGATCAACTTGCAAAAACGAACAGCTTCCGGAACAGCCCTTT GCTTCTTACAGGCATTCAGAAAGCTAGCATGGTGGATCTTATTCATATCAAGCAATCCCTTTTG CTCCATGCTTTCCAATAGATCCACAGAGTCTTTCAATCTTCCATCAATTAACAAACTATTGTAT CTCCTCAAGTAATCTGGCACGTCCTTTGTTCCCCTCAATCCAGCTCTATTTGCTGAAGTAGAGT TTTCTGGATTCTCCTTGCTCAGTAAATTAGAAATACTCCAGCCAATTAACTTTGCATCATCATG GTCATTCATTGCTTTCTTTTGTTTACTCACAGGACCATCCCTTAAGCATGCAACTGGAACCAAT CGCC
Genomic sequence	CAGTAAGACAACCAACGATTGTGGGATTGAGGTCAATACTGTCTATTTTTAATTGTTCAAATAG ATCCAAACCCAGTTGTGCTTCAGCATTCCTGTGGGGAAACTATTAGTACCTGAAGAGTGCGATA AGATTAGTTTGAAGAGTGCAGTTCCAGCTCAGAGTTGTTACCTTTCACAAGCCACAAATAACAC CGAATAGGTTATCATATTTGGACAGACTCCTAATCTCTTCATCTCACTAAGGACCTCAAAAGAC TTCAAAACTTGATCACCATCACCTGCATCATCGAGAAACTGTCATTATTTCCATGTCCAAAGAA GCAAGAGTTTTTAAAGAAAATGATAGGGAACAGCTATGAACATATATATAGAAAATGAAAGTTG CACCAAGGTTCCTATATTTGACTATAATAGCACTGAGGCTTTTAAAAGTAATTTGGCAGGTCTC AGAAACACATAATGGACTTCTACTTGGATCCTTCAATTTAGAAAGTTAAGTTATTGTGTCTTTT TCACTGGCTGAAACTGTGATGTAAGCCACACATCTTTATTAATTGGCAAAACGTTAGTATTAGC TCACTGAAATGACAAAAAAAACATTTTATTATTGCTACAAGTATTCAGATGTTTGGACATACAC AATGCGGTGATCAGAGCATTCATCATTGAAACGGTTGGCATTAATTTGATTGACTTGATCTCCT CAAATAGCTGCAATGCCTTTTTCCAGTCCTTGGCCTGAAACAAGAATTTAAATGTCGTGATAAT AACACCGAACTCAAATCAAAAGTACATGGAATACAAGTAAAATTGCAAAAGAAAGAATAACTAA GTGCATAAAAGACCTTGTGCTACTGTGGGGAGCAGAACTTAATAACTTGTTATATTGGTTTTCA TCCAACAATTTATGTCAGAACTTACATTGCAGCAAGCACCCATTAATGAACTGTATGCAATGGT TCCAACTTGATATCCCTTTGCTCTTGCATCTTTCATTATCTCAAAGGCAGCATCAGCCCTCCTA GCATGGCCAGCAACATCAACTAGAGCACTCAGAAACATCTGTAGTGGATGGAATCAAACAAACA TAACAGTTAAATAAGTCATGTGGGTTAAGCACATATCCCTTTAATGTTCTCTCTAGAAATAACA CCTCATCAGGTTGTACTCCAATCTTGTTCATATCTTCATAGATCTTCAGAGCAAATCCTAAATC ACCAGTCAAGCTACAGCTTCTCAATGCTATTGTGTAAACTTCTGGAGTACCCTTTATATTGTAC TCCTGAAGCATTTTGTATACCTCACGAGCTCGATCAGCCTACACAAACAAATGTTTTTTTGAGT TAGATACTATATAGCCTATTTCGCGTTTACAACAAAGGATCTGCAGAACACCTGGCCAGCCTGA ATACATGTCTTCATCAGAGCTCCAACTGTGACATGATCAGGAAGAATCGGTTTGGATCCTTTAG ATTCAGAGGCTTCTGCTGTCATTTCTGATAGAACATCAAAAGCTCGAGCAACCGCTCCAGATTC ACCGCATGCACTGATCAAAGCATTAAAGACAACTCGATCTGGCTTCACCTTCTACTGCAAGTAT GGCCCAGTAAGTTCAACAAACATGGAAAGCGCATAGAAGTGATTCACCAGTAGCATTTGCAGCA CAGGTGAATGGAAGACATGTAATATAAAAAGAAAAAATATCTACCACTTCACCTTTGAACTCAT GATACCATAAGCACCAAATGCTTTTGCTACTTGACCAGCTTTTGCACAGCCATCAATCAGTGCA CTATATGTGTTAACATTTGGCTCTATTCCAGCACTGACCATCTCATGGAAGACCTTAAATATAA GTACACAATAGATATAAAGCTATCATATTTTTAAGTCAAACATATATGTATGAATATGTCATTT AGTTACCTCAAACATAGCATCAACTTTTCCACACTTGGCACAAGTCGATATAAGTGTTGTGTAA AGTTTACAATCAGGTTTTAGCCCAGCTTCCTTTAGGAGCACCATAACTTGGAGAGCCCCTAAAA GGTAAAAACAGTCATGTCTCATCAGATCTTAATCTAACAAATCACACAAGAAAGCTGCAGTTTT AAGTTCAAGCAGCTACCATCAAAATCTTGCGAATTAGCGCACACAGATAAAAGCATATTGAAGG TACTCATTTTTGGGTTATTGATCAACTTGCAAAAACGAACAGCTTCCGGAACAGCCCTTTGCTT CTTACAGGCATTCAGAAAGCTAGCATGGTGGATCTGAAAGTAGATGGAAATCAGGAAAGAGAAG AAGATATACACTAAAAAAAGGACTATTAGAACAGGTAACAACCTTATTCATATCAAGCAATCCC TTTTGCTCCATGCTTTCCAATAGATCCACAGAGTCTTTCAATCTGACCATACCAAATTGAAGTA TCAAGCAAAAAATATTTATAGCACAAAGAGTGCAGCATATTTAATATGAAAATTCCATGTATGT AAGGGGTGTTCTGGGAACAGATTAATAGCAATTATTATGTCCAACATTATACCTTCCATCAATT AACAAACTATTGTATCTCCTCAAGTAATCTGGCACGTCCTTTGTTCCCCTCAATCCAGCTCTAT TTGCTGAAGTAGAGTTTTCTGGATTCTCCTTGCTCAGTAAATTAGAAATACTCCAGCCAATTAA CTTTGCATCATCATGGTCATTCATTGCTTTCTTTTGTTTACTCACAGGACCATCCCTTAAGCAT GCAACTGGAACCAATCGCC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.26858644

Conservation Information
Conserved circRNAs	NA
PMCS	0.26858644

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							5584711-5582000(-)
						
					

						Potential amino acid sequence
						
							MNDHDDAKLIGWSISNLLSKENPENSTSANRAGLRGTKDVPDYLRRYNSLLIDGRLKDSVDLLE
SMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMSTFNMLLSVCANSQDFDGALQ
VMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQ
VAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPILPDHV
TVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIG
VQPDEMFLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFE
EIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACERNAEAQL
GLDLFEQLKIDSIDLNPTIVGCLTGRLVPVACLRDGPVSKQKKAMNDHDDAKLIGWSISNLLSK
ENPENSTSANRAGLRGTKDVPDYLRRYNSLLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLN
ACKKQRAVPEAVRFCKLINNPKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTL
ISTCAKCGKVDAMFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDR
VVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRARE
VYKMLQEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARR
ADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITA
LCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIV
GCLTGRLVPVACLRDGPVSKQKKAMNDHDDAKLIGWSISNLLSKENPENSTSANRAGLRGTKDV
PDYLRRYNSLLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINN
PKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEM
VSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAF
DVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIA
LRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMKDARAKGYQVGT
IAYSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMKRL
GVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGRLVPVACLRDGPVSK
QKKAMNDHDDAKLIGWSISNLLSKENPENSTSANRAGLRGTKDVPDYLRRYNSLLIDGRLKDSV
DLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMSTFNMLLSVCANSQDFD
GALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVSAGIEPNVNTYSALIDGCA
KAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPIL
PDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDM
NKIGVQPDEMFLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKAL
QLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACERNA
EAQLGLDLFEQLKIDSIDLNPTIVGCLT(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	5584711-5582000(-)
Potential amino acid sequence	MNDHDDAKLIGWSISNLLSKENPENSTSANRAGLRGTKDVPDYLRRYNSLLIDGRLKDSVDLLE SMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMSTFNMLLSVCANSQDFDGALQ VMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQ VAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPILPDHV TVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIG VQPDEMFLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFE EIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACERNAEAQL GLDLFEQLKIDSIDLNPTIVGCLTGRLVPVACLRDGPVSKQKKAMNDHDDAKLIGWSISNLLSK ENPENSTSANRAGLRGTKDVPDYLRRYNSLLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLN ACKKQRAVPEAVRFCKLINNPKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTL ISTCAKCGKVDAMFEVFHEMVSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDR VVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRARE VYKMLQEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARR ADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITA LCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIV GCLTGRLVPVACLRDGPVSKQKKAMNDHDDAKLIGWSISNLLSKENPENSTSANRAGLRGTKDV PDYLRRYNSLLIDGRLKDSVDLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINN PKMSTFNMLLSVCANSQDFDGALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEM VSAGIEPNVNTYSALIDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAF DVLSEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIA LRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMKDARAKGYQVGT IAYSSLMGACCNAKDWKKALQLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMKRL GVCPNMITYSVLFVACERNAEAQLGLDLFEQLKIDSIDLNPTIVGCLTGRLVPVACLRDGPVSK QKKAMNDHDDAKLIGWSISNLLSKENPENSTSANRAGLRGTKDVPDYLRRYNSLLIDGRLKDSV DLLESMEQKGLLDMNKIHHASFLNACKKQRAVPEAVRFCKLINNPKMSTFNMLLSVCANSQDFD GALQVMVLLKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVSAGIEPNVNTYSALIDGCA KAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESGAVARAFDVLSEMTAEASESKGSKPIL PDHVTVGALMKTCIQAGQADRAREVYKMLQEYNIKGTPEVYTIALRSCSLTGDLGFALKIYEDM NKIGVQPDEMFLSALVDVAGHARRADAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKAL QLFEEIKSIKLMPTVSMMNALITALCDGDQVLKSFEVLSEMKRLGVCPNMITYSVLFVACERNA EAQLGLDLFEQLKIDSIDLNPTIVGCLT(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os10g0181333_circ_g.10

Address

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