Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Os11g0562100_circ_g.7 |
| ID in PlantcircBase | osa_circ_009620 |
| Alias | Os_ciR7096 |
| Organism | Oryza sativa |
| Position | chr11: 20951792-20956148 JBrowse» |
| Reference genome | IRGSP-1.0.38 |
| Type | ei-circRNA |
| Identification method | find_circ |
| Parent gene | Os11g0562100 |
| Parent gene annotation |
Squalene cyclase domain containing protein. (Os11t0562100-01);Si milar to cycloartenol synthase. (Os11t0562100-02) |
| Parent gene strand | + |
| Alternative splicing | Os11g0562100_circ_g.1 Os11g0562100_circ_g.2 Os11g0562100_circ_g.3 Os11g0562100_circ_g.4 Os11g0562100_circ_g.5 Os11g0562100_circ_g.6 Os11g0562100_circ_g.8 Os11g0562100_circ_g.9 Os11g0562100_circ_g.10 Os11g0562100_circ_g.11 |
| Support reads | 2 |
| Tissues | root |
| Exon boundary | No-Yes |
| Splicing signals | GT-AG |
| Number of exons covered | Os11t0562100-01:9 Os11t0562100-02:9 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.102667108 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Ye et al., 2015 |