Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os01g0896700_circ_ag.1 |
ID in PlantcircBase | osa_circ_005213 |
Alias | Os01circ30244/Os_ciR466 |
Organism | Oryza sativa |
Position | chr1: 38969102-38973742 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ag-circRNA |
Identification method | SMALT, Segemehl, find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | Os01g0896700_circ_ag.2 Os01g0896700_circ_ag.3 Os01g0896700_circ_g.1 Os01g0896700_circ_ag.2 Os01g0896700_circ_ag.3 Os01g0896700_circ_ag.4 Os01g0896700_circ_ag.5 Os01g0896700_circ_ag.6 Os01g0896700_circ_ag.7 Os01g0896800_circ_g.1 |
Support reads | 5/2595/858 |
Tissues | panicle/root/shoot, seed, pistil |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | osi_circ_011056 |
PMCS | 0.513233728 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015;Ye et al., 2015;Chu et al., 2017 |