Plant Circular RNA Database

Detail information of Os11g0568300_circ_g.5

			
						 General Information
					
						CircRNA Name
						Os11g0568300_circ_g.5
					
						ID in PlantcircBase
						osa_circ_009632
					
						Alias
						Os_ciR343
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr11: 21180203-21180854  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, CIRI, KNIFE, PcircRNA_finder, circRNA_finder, circseq_cup, find_circ
					
						Parent gene
						
							Os11g0568300						
					
						Parent gene annotation
						
							Cell division cycle-associated protein domain containing protein
. (Os11t0568300-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os11g0568300_circ_g.1 Os11g0568300_circ_g.2 Os11g0568300_circ_g.3 Os11g0568300_circ_g.4 Os11g0568300_circ_g.6 						
					
						Support reads
						132/10/10
					
						Tissues
						root/root/shoot, root, seed
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os11t0568300-01:2

General Information
CircRNA Name	Os11g0568300_circ_g.5
ID in PlantcircBase	osa_circ_009632
Alias	Os_ciR343
Organism	Oryza sativa
Position	chr11: 21180203-21180854 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, CIRI, KNIFE, PcircRNA_finder, circRNA_finder, circseq_cup, find_circ
Parent gene	Os11g0568300
Parent gene annotation	Cell division cycle-associated protein domain containing protein . (Os11t0568300-01)
Parent gene strand	-
Alternative splicing	Os11g0568300_circ_g.1 Os11g0568300_circ_g.2 Os11g0568300_circ_g.3 Os11g0568300_circ_g.4 Os11g0568300_circ_g.6
Support reads	132/10/10
Tissues	root/root/shoot, root, seed
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os11t0568300-01:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGA
ATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGCctcatgtacaaacaatccccacagaact
gcccctggacaatctggcatttacagcagctggtatgatggccaagagttttctgcctgtatca
tggaaaca

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 177
Transcript exons: 21180203-21180283,21180759-21180854
CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT
GATGGCCAAGAGTTTTCCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTC
CTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC
Transcript length: 184
Transcript exons: 21180203-21180264,21180733-21180854
CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTCT
TCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGT
CCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC
Transcript length: 191
Transcript exons: 21180203-21180261,21180723-21180854
CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTTTCTC
ATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCA
TTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC
Transcript length: 196
Transcript exons: 21180203-21180283,21180740-21180854
CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT
GATGGCCAAGAGTTTTCGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCAC
CTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTT
CAGC
Transcript length: 212
Transcript exons: 21180203-21180255,21180696-21180854
CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACACAGGGTTCCAC
ACAAGGGCCTAAAAGTTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATT
AGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAA
CAGGCTCTACGTTCTTCAGC
Transcript length: 213
Transcript exons: 21180203-21180283,21180723-21180854
CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT
GATGGCCAAGAGTTTTCTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGAT
TAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTA
ACAGGCTCTACGTTCTTCAGC
Transcript length: 219
Transcript exons: 21180203-21180289,21180723-21180854
CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT
GATGGCCAAGAGTTTTCTGCCTGTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGC
CTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAG
TAGCTAACAGGCTCTACGTTCTTCAGC
Transcript length: 234
Transcript exons: 21180203-21180283,21180702-21180854
CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT
GATGGCCAAGAGTTTTCTCCACACAAGGGCCTAAAAGTTTCTCATCCTCTTCCGTGTAAACTTC
TTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTA
GTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC
Transcript length: 237
Transcript exons: 21180203-21180248,21180664-21180854
CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCCATCTTTCCCATAACCAT
CCACAAAGAGAGTCCAGGGTTCCACACAAGGGCCTAAAAGTTTCTCATCCTCTTCCGTGTAAAC
TTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTT
TTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC
Transcript length: 242
Transcript exons: 21180203-21180285,21180696-21180854
CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT
GATGGCCAAGAGTTTTCTGCAGGGTTCCACACAAGGGCCTAAAAGTTTCTCATCCTCTTCCGTG
TAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGT
CCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC
Transcript length: 274
Transcript exons: 21180203-21180259,21180638-21180854
CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCCTCACT
TGATCATAGATGCGCTTACCATCTTTCCCATAACCATCCACAAAGAGAGTCCAGGGTTCCACAC
AAGGGCCTAAAAGTTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAG
AACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACA
GGCTCTACGTTCTTCAGC
Transcript length: 299
Transcript exons: 21180203-21180289,21180643-21180854
CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT
GATGGCCAAGAGTTTTCTGCCTGCTTGATCATAGATGCGCTTACCATCTTTCCCATAACCATCC
ACAAAGAGAGTCCAGGGTTCCACACAAGGGCCTAAAAGTTTCTCATCCTCTTCCGTGTAAACTT
CTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTT
AGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC
Transcript length: 304
Transcript exons: 21180203-21180307,21180656-21180854
CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT
GATGGCCAAGAGTTTTCTGCCTGTATCATGGAAACATCAAAGCGCTTACCATCTTTCCCATAAC
CATCCACAAAGAGAGTCCAGGGTTCCACACAAGGGCCTAAAAGTTTCTCATCCTCTTCCGTGTA
AACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCC
TTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC
Transcript length: 324
Transcript exons: 21180203-21180286,21180615-21180854
CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT
GATGGCCAAGAGTTTTCTGCCGGCACTGATGACAGGTTTGGCCCCTCACTTGATCATAGATGCG
CTTACCATCTTTCCCATAACCATCCACAAAGAGAGTCCAGGGTTCCACACAAGGGCCTAAAAGT
TTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCAC
CTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTT
CAGC
						
					

						Genomic sequence
						
							CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT
GATGGCCAAGAGTTTTCTGCCTGTATCATGGAAACATCAAACTATTATGTCACAGTTTCACAAC
ATGAACAGCATTTAACAGATTCTTCAGTAGAAGTAATTTAAATTGTAAATTGGCGGCTACACTA
ACTTGGTTTATTTTTCTCATTTTGTCATTACTAAGAATGTACACTGTTCCATACAGATCCTATT
AGTTTAATATTATAGAAGGGGAACCATTGTATATTTGTGCACATTGTCTTTCTTAACCTTACAG
TAACAGTCAATACTATTACATCTAAGCAAAGGAACCTGTAGCAAAAGTACAGCTATACAACATT
GCCATATGATTCTTCCAGGGAAACTTACCGGCACTGATGACAGGTTTGGCCCCTCACTTGATCA
TAGATGCGCTTACCATCTTTCCCATAACCATCCACAAAGAGAGTCCAGGGTTCCACACAAGGGC
CTAAAAGTTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGA
GTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCT
ACGTTCTTCAGC
						
					

			
		

Sequences
Splice junction sequence	TGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGA ATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGCctcatgtacaaacaatccccacagaact gcccctggacaatctggcatttacagcagctggtatgatggccaagagttttctgcctgtatca tggaaaca
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 177 Transcript exons: 21180203-21180283,21180759-21180854 CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT GATGGCCAAGAGTTTTCCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTC CTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC Transcript length: 184 Transcript exons: 21180203-21180264,21180733-21180854 CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTCT TCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGT CCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC Transcript length: 191 Transcript exons: 21180203-21180261,21180723-21180854 CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTTTCTC ATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCA TTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC Transcript length: 196 Transcript exons: 21180203-21180283,21180740-21180854 CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT GATGGCCAAGAGTTTTCGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCAC CTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTT CAGC Transcript length: 212 Transcript exons: 21180203-21180255,21180696-21180854 CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACACAGGGTTCCAC ACAAGGGCCTAAAAGTTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATT AGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAA CAGGCTCTACGTTCTTCAGC Transcript length: 213 Transcript exons: 21180203-21180283,21180723-21180854 CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT GATGGCCAAGAGTTTTCTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGAT TAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTA ACAGGCTCTACGTTCTTCAGC Transcript length: 219 Transcript exons: 21180203-21180289,21180723-21180854 CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT GATGGCCAAGAGTTTTCTGCCTGTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGC CTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAG TAGCTAACAGGCTCTACGTTCTTCAGC Transcript length: 234 Transcript exons: 21180203-21180283,21180702-21180854 CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT GATGGCCAAGAGTTTTCTCCACACAAGGGCCTAAAAGTTTCTCATCCTCTTCCGTGTAAACTTC TTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTA GTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC Transcript length: 237 Transcript exons: 21180203-21180248,21180664-21180854 CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCCATCTTTCCCATAACCAT CCACAAAGAGAGTCCAGGGTTCCACACAAGGGCCTAAAAGTTTCTCATCCTCTTCCGTGTAAAC TTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTT TTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC Transcript length: 242 Transcript exons: 21180203-21180285,21180696-21180854 CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT GATGGCCAAGAGTTTTCTGCAGGGTTCCACACAAGGGCCTAAAAGTTTCTCATCCTCTTCCGTG TAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGT CCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC Transcript length: 274 Transcript exons: 21180203-21180259,21180638-21180854 CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCCTCACT TGATCATAGATGCGCTTACCATCTTTCCCATAACCATCCACAAAGAGAGTCCAGGGTTCCACAC AAGGGCCTAAAAGTTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAG AACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACA GGCTCTACGTTCTTCAGC Transcript length: 299 Transcript exons: 21180203-21180289,21180643-21180854 CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT GATGGCCAAGAGTTTTCTGCCTGCTTGATCATAGATGCGCTTACCATCTTTCCCATAACCATCC ACAAAGAGAGTCCAGGGTTCCACACAAGGGCCTAAAAGTTTCTCATCCTCTTCCGTGTAAACTT CTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTT AGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC Transcript length: 304 Transcript exons: 21180203-21180307,21180656-21180854 CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT GATGGCCAAGAGTTTTCTGCCTGTATCATGGAAACATCAAAGCGCTTACCATCTTTCCCATAAC CATCCACAAAGAGAGTCCAGGGTTCCACACAAGGGCCTAAAAGTTTCTCATCCTCTTCCGTGTA AACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCC TTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC Transcript length: 324 Transcript exons: 21180203-21180286,21180615-21180854 CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT GATGGCCAAGAGTTTTCTGCCGGCACTGATGACAGGTTTGGCCCCTCACTTGATCATAGATGCG CTTACCATCTTTCCCATAACCATCCACAAAGAGAGTCCAGGGTTCCACACAAGGGCCTAAAAGT TTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCAC CTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTT CAGC
Genomic sequence	CTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTAT GATGGCCAAGAGTTTTCTGCCTGTATCATGGAAACATCAAACTATTATGTCACAGTTTCACAAC ATGAACAGCATTTAACAGATTCTTCAGTAGAAGTAATTTAAATTGTAAATTGGCGGCTACACTA ACTTGGTTTATTTTTCTCATTTTGTCATTACTAAGAATGTACACTGTTCCATACAGATCCTATT AGTTTAATATTATAGAAGGGGAACCATTGTATATTTGTGCACATTGTCTTTCTTAACCTTACAG TAACAGTCAATACTATTACATCTAAGCAAAGGAACCTGTAGCAAAAGTACAGCTATACAACATT GCCATATGATTCTTCCAGGGAAACTTACCGGCACTGATGACAGGTTTGGCCCCTCACTTGATCA TAGATGCGCTTACCATCTTTCCCATAACCATCCACAAAGAGAGTCCAGGGTTCCACACAAGGGC CTAAAAGTTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGA GTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCT ACGTTCTTCAGC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_009120 						
					
						PMCS
						0.547721763

Conservation Information
Conserved circRNAs	osi_circ_009120
PMCS	0.547721763

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							21180252-21180833(-)
21180209-21180205(-)
						
						Potential amino acid sequence
						
							MPDCPGAVLWGLFVHEAEERRAC*(-)
MRLKNVEPVSYCEIRTKKDKDDNEGGNSVLIEAGSKEEVYTEEDEKLLGPCVEPWTLFVDGYGK
DGKRIYDQVRGQTCHQCRQKTLGHHTSCCKCQIVQGQFCGDCLYMRLKNVEPVSYCEIRTKKDK
DDNEGGNSVLIEAGSKEEVYTEEDEKLLGPCVEPWTLFVDGYGKDGKRIYDQVRGQTCHQCRQK
TLGHHTSCCKCQIVQGQFCGDCLYMRLKNVEPVSYCEIRTKKDKDDNEGGNSVLIEAGSKEEVY
TEEDEKLLGPCVEPWTLFVDGYGKDGKRIYDQVRGQTCHQCRQKTLGHHTSCCKCQIVQGQFCG
DCLYM(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to Pi-starvation

Functional Information
Coding potential	Y
Potential coding position	21180252-21180833(-) 21180209-21180205(-)
Potential amino acid sequence	MPDCPGAVLWGLFVHEAEERRAC*(-) MRLKNVEPVSYCEIRTKKDKDDNEGGNSVLIEAGSKEEVYTEEDEKLLGPCVEPWTLFVDGYGK DGKRIYDQVRGQTCHQCRQKTLGHHTSCCKCQIVQGQFCGDCLYMRLKNVEPVSYCEIRTKKDK DDNEGGNSVLIEAGSKEEVYTEEDEKLLGPCVEPWTLFVDGYGKDGKRIYDQVRGQTCHQCRQK TLGHHTSCCKCQIVQGQFCGDCLYMRLKNVEPVSYCEIRTKKDKDDNEGGNSVLIEAGSKEEVY TEEDEKLLGPCVEPWTLFVDGYGKDGKRIYDQVRGQTCHQCRQKTLGHHTSCCKCQIVQGQFCG DCLYM(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to Pi-starvation

			
						 Other Information
					
						References
						Ye et al., 2015;Ye et al., 2016;Chu et al., 2017

circRNA

Detail information of Os11g0568300_circ_g.5

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