Plant Circular RNA Database

Detail information of Os11g0568300_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os11g0568300_circ_g.3
					
						ID in PlantcircBase
						osa_circ_009630
					
						Alias
						Os_ciR308
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr11: 21179447-21180854  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, KNIFE, PcircRNA_finder, circseq_cup, find_circ
					
						Parent gene
						
							Os11g0568300						
					
						Parent gene annotation
						
							Cell division cycle-associated protein domain containing protein
. (Os11t0568300-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os11g0568300_circ_g.1 Os11g0568300_circ_g.2 Os11g0568300_circ_g.4 Os11g0568300_circ_g.5 Os11g0568300_circ_g.6 						
					
						Support reads
						126/6/19
					
						Tissues
						root/root/shoot, root, seed
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os11t0568300-01:3

General Information
CircRNA Name	Os11g0568300_circ_g.3
ID in PlantcircBase	osa_circ_009630
Alias	Os_ciR308
Organism	Oryza sativa
Position	chr11: 21179447-21180854 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, KNIFE, PcircRNA_finder, circseq_cup, find_circ
Parent gene	Os11g0568300
Parent gene annotation	Cell division cycle-associated protein domain containing protein . (Os11t0568300-01)
Parent gene strand	-
Alternative splicing	Os11g0568300_circ_g.1 Os11g0568300_circ_g.2 Os11g0568300_circ_g.4 Os11g0568300_circ_g.5 Os11g0568300_circ_g.6
Support reads	126/6/19
Tissues	root/root/shoot, root, seed
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os11t0568300-01:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							Yes							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							F: AATGCCAGATTGTCCAGGGG
 R: GGTTCCACACAAGGGCCTAA
PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							Yes							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							F: CAATGAAGGTGGAAACTCTG
 R: ATTGTCGTCCTTGTCCTTTT
PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	Yes Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	F: AATGCCAGATTGTCCAGGGG R: GGTTCCACACAAGGGCCTAA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	Yes Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	F: CAATGAAGGTGGAAACTCTG R: ATTGTCGTCCTTGTCCTTTT PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGA
ATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGCcttcctatacgcagcaccagttggaaac
catcctttcttagttctgcagatactgcaattgcaaatgccacgacaaactggacatatccaat
caggattc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 177
Transcript exons: 21179447-21179525,21180757-21180854
CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA
ATGCCACGACAAACTATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTC
CTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC
Transcript length: 187
Transcript exons: 21179447-21179524,21180746-21180854
CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA
ATGCCACGACAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGT
CGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC
Transcript length: 214
Transcript exons: 21179447-21179571,21180766-21180854
CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA
ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACATTCTCACCGA
TTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCT
AACAGGCTCTACGTTCTTCAGC
Transcript length: 236
Transcript exons: 21179447-21179560,21180202-21180232,21180764-21180854
CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA
ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCCTCATGTACAAAC
AATCCCCACAGAACTGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTT
TAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC
Transcript length: 239
Transcript exons: 21179447-21179563,21180733-21180854
CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA
ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACCTTCCGTGTAA
ACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCT
TTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC
Transcript length: 246
Transcript exons: 21179447-21179560,21180723-21180854
CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA
ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGTTCTCATCCTCTTC
CGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCC
TTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC
Transcript length: 257
Transcript exons: 21179447-21179570,21180202-21180281,21180802-21180854
CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA
ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACATTCTCACCTC
ATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTATGAT
GGCCAAGAGTTTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAG
C
Transcript length: 263
Transcript exons: 21179447-21179560,21180202-21180223,21180728-21180854
CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA
ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCCTCATGTACAAAC
AATCCCCAATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTC
CACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTT
CTTCAGC
Transcript length: 268
Transcript exons: 21179447-21179577,21180718-21180854
CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA
ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACATTCTCACCAT
ACCAAAGTTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGA
GTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCT
ACGTTCTTCAGC
Transcript length: 291
Transcript exons: 21179447-21179568,21180667-21180767,21180787-21180854
CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA
ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACATTCTCTTTCC
CATAACCATCCACAAAGAGAGTCCAGGGTTCCACACAAGGGCCTAAAAGTTTCTCATCCTCTTC
CGTGTAAACTTCTTCCTTTGATCCAGCCTCGCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAA
TTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC
Transcript length: 295
Transcript exons: 21179447-21179563,21180202-21180283,21180759-21180854
CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA
ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACCCTCATGTACA
AACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTATGATGGCCAAG
AGTTTTCCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTC
CGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC
Transcript length: 384
Transcript exons: 21179447-21179560,21180202-21180289,21180673-21180854
CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA
ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCCTCATGTACAAAC
AATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTATGATGGCCAAGAGT
TTTCTGCCTGCATAACCATCCACAAAGAGAGTCCAGGGTTCCACACAAGGGCCTAAAAGTTTCT
CATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTC
ATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC
Transcript length: 400
Transcript exons: 21179447-21179571,21180202-21180259,21180638-21180854
CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA
ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACATTCTCACCCT
CATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCCTCACTTG
ATCATAGATGCGCTTACCATCTTTCCCATAACCATCCACAAAGAGAGTCCAGGGTTCCACACAA
GGGCCTAAAAGTTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAA
CAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGG
CTCTACGTTCTTCAGC
Transcript length: 401
Transcript exons: 21179447-21179570,21180202-21180281,21180658-21180854
CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA
ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACATTCTCACCTC
ATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTATGAT
GGCCAAGAGTTTGCTTACCATCTTTCCCATAACCATCCACAAAGAGAGTCCAGGGTTCCACACA
AGGGCCTAAAAGTTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGA
ACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAG
GCTCTACGTTCTTCAGC
Transcript length: 454
Transcript exons: 21179447-21179576,21180203-21180286,21180615-21180854
CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA
ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACATTCTCACCAT
ACCTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGT
ATGATGGCCAAGAGTTTTCTGCCGGCACTGATGACAGGTTTGGCCCCTCACTTGATCATAGATG
CGCTTACCATCTTTCCCATAACCATCCACAAAGAGAGTCCAGGGTTCCACACAAGGGCCTAAAA
GTTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCC
ACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTC
TTCAGC
						
					

						Genomic sequence
						
							CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA
ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACATTCTCACCAT
ACCTGCATTAATTATAAAGTCAGTCCAAAATGGAGAGCTCAATCGGTTTAGGTACTAGTAGTTT
ATGTACAGTCTATTTGTAATCTTCCAGTAACTAAAAGTGTGTGGGAATTTACTACTTTCCAATA
TCTATTGCTGATCATTTCAACTTGATATTTTAATGCAAGCAAAAACTAACGGGTAGGCAGTTAA
AAAAAACACTAACAGGTAGGTGATTACCAATTCATAAAACCCTCCATGCTTGCAATAAATTCAG
AAGTCAAATTTTAAAACTTGAATACTAGGAAACCCTGTTTTGATTCACAAATTAGGACACGGAT
ATTAAGAATTCTGTTTTGATTTGCAAAAACTTGAAGTTAGAAAACATATCCAGATGCAAAAACT
GAGTAGTTTTGTTCCTGTAACTTGAACCCTGGCTCAAACCTTCAAGTTAAAGGATACAGAGATG
CAAACATAATGTAATAGACAAAGATGGCAGAGAAGGATGTATGGAACAATCGATTAAAAAAATA
ATAGCACTAAGAAAAGATGCATGTTCGCTACAGCTATCATATGCAATAGTGTGTCCACTTTTTT
CAGGAAAATCATTGGTCGATTGAGAAAGTATGAGAAAAGAAAAGGGCCCCACCTCATGTACAAA
CAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTATGATGGCCAAGAG
TTTTCTGCCTGTATCATGGAAACATCAAACTATTATGTCACAGTTTCACAACATGAACAGCATT
TAACAGATTCTTCAGTAGAAGTAATTTAAATTGTAAATTGGCGGCTACACTAACTTGGTTTATT
TTTCTCATTTTGTCATTACTAAGAATGTACACTGTTCCATACAGATCCTATTAGTTTAATATTA
TAGAAGGGGAACCATTGTATATTTGTGCACATTGTCTTTCTTAACCTTACAGTAACAGTCAATA
CTATTACATCTAAGCAAAGGAACCTGTAGCAAAAGTACAGCTATACAACATTGCCATATGATTC
TTCCAGGGAAACTTACCGGCACTGATGACAGGTTTGGCCCCTCACTTGATCATAGATGCGCTTA
CCATCTTTCCCATAACCATCCACAAAGAGAGTCCAGGGTTCCACACAAGGGCCTAAAAGTTTCT
CATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTC
ATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC
						
					

			
		

Sequences
Splice junction sequence	TGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGA ATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGCcttcctatacgcagcaccagttggaaac catcctttcttagttctgcagatactgcaattgcaaatgccacgacaaactggacatatccaat caggattc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 177 Transcript exons: 21179447-21179525,21180757-21180854 CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA ATGCCACGACAAACTATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTC CTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC Transcript length: 187 Transcript exons: 21179447-21179524,21180746-21180854 CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA ATGCCACGACAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGT CGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC Transcript length: 214 Transcript exons: 21179447-21179571,21180766-21180854 CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACATTCTCACCGA TTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCT AACAGGCTCTACGTTCTTCAGC Transcript length: 236 Transcript exons: 21179447-21179560,21180202-21180232,21180764-21180854 CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCCTCATGTACAAAC AATCCCCACAGAACTGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTT TAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC Transcript length: 239 Transcript exons: 21179447-21179563,21180733-21180854 CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACCTTCCGTGTAA ACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCT TTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC Transcript length: 246 Transcript exons: 21179447-21179560,21180723-21180854 CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGTTCTCATCCTCTTC CGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCC TTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC Transcript length: 257 Transcript exons: 21179447-21179570,21180202-21180281,21180802-21180854 CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACATTCTCACCTC ATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTATGAT GGCCAAGAGTTTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAG C Transcript length: 263 Transcript exons: 21179447-21179560,21180202-21180223,21180728-21180854 CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCCTCATGTACAAAC AATCCCCAATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTC CACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTT CTTCAGC Transcript length: 268 Transcript exons: 21179447-21179577,21180718-21180854 CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACATTCTCACCAT ACCAAAGTTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGA GTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCT ACGTTCTTCAGC Transcript length: 291 Transcript exons: 21179447-21179568,21180667-21180767,21180787-21180854 CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACATTCTCTTTCC CATAACCATCCACAAAGAGAGTCCAGGGTTCCACACAAGGGCCTAAAAGTTTCTCATCCTCTTC CGTGTAAACTTCTTCCTTTGATCCAGCCTCGCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAA TTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC Transcript length: 295 Transcript exons: 21179447-21179563,21180202-21180283,21180759-21180854 CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACCCTCATGTACA AACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTATGATGGCCAAG AGTTTTCCCAGCCTCGATTAGAACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTC CGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC Transcript length: 384 Transcript exons: 21179447-21179560,21180202-21180289,21180673-21180854 CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCCTCATGTACAAAC AATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTATGATGGCCAAGAGT TTTCTGCCTGCATAACCATCCACAAAGAGAGTCCAGGGTTCCACACAAGGGCCTAAAAGTTTCT CATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTC ATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC Transcript length: 400 Transcript exons: 21179447-21179571,21180202-21180259,21180638-21180854 CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACATTCTCACCCT CATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCCTCACTTG ATCATAGATGCGCTTACCATCTTTCCCATAACCATCCACAAAGAGAGTCCAGGGTTCCACACAA GGGCCTAAAAGTTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAA CAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGG CTCTACGTTCTTCAGC Transcript length: 401 Transcript exons: 21179447-21179570,21180202-21180281,21180658-21180854 CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACATTCTCACCTC ATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTATGAT GGCCAAGAGTTTGCTTACCATCTTTCCCATAACCATCCACAAAGAGAGTCCAGGGTTCCACACA AGGGCCTAAAAGTTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGA ACAGAGTTTCCACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAG GCTCTACGTTCTTCAGC Transcript length: 454 Transcript exons: 21179447-21179576,21180203-21180286,21180615-21180854 CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACATTCTCACCAT ACCTCATGTACAAACAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGT ATGATGGCCAAGAGTTTTCTGCCGGCACTGATGACAGGTTTGGCCCCTCACTTGATCATAGATG CGCTTACCATCTTTCCCATAACCATCCACAAAGAGAGTCCAGGGTTCCACACAAGGGCCTAAAA GTTTCTCATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCC ACCTTCATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTC TTCAGC
Genomic sequence	CTTCCTATACGCAGCACCAGTTGGAAACCATCCTTTCTTAGTTCTGCAGATACTGCAATTGCAA ATGCCACGACAAACTGGACATATCCAATCAGGATTCTTCTTAGCTTCGAGCACATTCTCACCAT ACCTGCATTAATTATAAAGTCAGTCCAAAATGGAGAGCTCAATCGGTTTAGGTACTAGTAGTTT ATGTACAGTCTATTTGTAATCTTCCAGTAACTAAAAGTGTGTGGGAATTTACTACTTTCCAATA TCTATTGCTGATCATTTCAACTTGATATTTTAATGCAAGCAAAAACTAACGGGTAGGCAGTTAA AAAAAACACTAACAGGTAGGTGATTACCAATTCATAAAACCCTCCATGCTTGCAATAAATTCAG AAGTCAAATTTTAAAACTTGAATACTAGGAAACCCTGTTTTGATTCACAAATTAGGACACGGAT ATTAAGAATTCTGTTTTGATTTGCAAAAACTTGAAGTTAGAAAACATATCCAGATGCAAAAACT GAGTAGTTTTGTTCCTGTAACTTGAACCCTGGCTCAAACCTTCAAGTTAAAGGATACAGAGATG CAAACATAATGTAATAGACAAAGATGGCAGAGAAGGATGTATGGAACAATCGATTAAAAAAATA ATAGCACTAAGAAAAGATGCATGTTCGCTACAGCTATCATATGCAATAGTGTGTCCACTTTTTT CAGGAAAATCATTGGTCGATTGAGAAAGTATGAGAAAAGAAAAGGGCCCCACCTCATGTACAAA CAATCCCCACAGAACTGCCCCTGGACAATCTGGCATTTACAGCAGCTGGTATGATGGCCAAGAG TTTTCTGCCTGTATCATGGAAACATCAAACTATTATGTCACAGTTTCACAACATGAACAGCATT TAACAGATTCTTCAGTAGAAGTAATTTAAATTGTAAATTGGCGGCTACACTAACTTGGTTTATT TTTCTCATTTTGTCATTACTAAGAATGTACACTGTTCCATACAGATCCTATTAGTTTAATATTA TAGAAGGGGAACCATTGTATATTTGTGCACATTGTCTTTCTTAACCTTACAGTAACAGTCAATA CTATTACATCTAAGCAAAGGAACCTGTAGCAAAAGTACAGCTATACAACATTGCCATATGATTC TTCCAGGGAAACTTACCGGCACTGATGACAGGTTTGGCCCCTCACTTGATCATAGATGCGCTTA CCATCTTTCCCATAACCATCCACAAAGAGAGTCCAGGGTTCCACACAAGGGCCTAAAAGTTTCT CATCCTCTTCCGTGTAAACTTCTTCCTTTGATCCAGCCTCGATTAGAACAGAGTTTCCACCTTC ATTGTCGTCCTTGTCCTTTTTAGTCCGAATTTCACAGTAGCTAACAGGCTCTACGTTCTTCAGC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_003192* osi_circ_009119 						
					
						PMCS
						0.539450715

Conservation Information
Conserved circRNAs	osi_circ_003192* osi_circ_009119
PMCS	0.539450715

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							21180209-21180833(-)
21179576-21180833(-)
						
						Potential amino acid sequence
						
							MRYGENVLEAKKNPDWICPVCRGICNCSICRTKKGWFPTGAAYRKAEERRAC*(-)
MVRMCSKLRRILIGYVQFVVAFAIAVSAELRKDGFQLVLRIGRLKNVEPVSYCEIRTKKDKDDN
EGGNSVLIEAGSKEEVYTEEDEKLLGPCVEPWTLFVDGYGKDGKRIYDQVRGQTCHQCRQKTLG
HHTSCCKCQIVQGQFCGDCLYMRYGENVLEAKKNPDWICPVCRGICNCSICRTKKGWFPTGAAY
RKAEERRAC*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	21180209-21180833(-) 21179576-21180833(-)
Potential amino acid sequence	MRYGENVLEAKKNPDWICPVCRGICNCSICRTKKGWFPTGAAYRKAEERRAC(-) MVRMCSKLRRILIGYVQFVVAFAIAVSAELRKDGFQLVLRIGRLKNVEPVSYCEIRTKKDKDDN EGGNSVLIEAGSKEEVYTEEDEKLLGPCVEPWTLFVDGYGKDGKRIYDQVRGQTCHQCRQKTLG HHTSCCKCQIVQGQFCGDCLYMRYGENVLEAKKNPDWICPVCRGICNCSICRTKKGWFPTGAAY RKAEERRAC(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Ye et al., 2016;Chu et al., 2017

circRNA

Detail information of Os11g0568300_circ_g.3

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